Factsheet for PGSC0003DMT400083794

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
golgi 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g105780.2.1	Tomato	nucleus	63.39	65.69
Bra031921.1-P	Field mustard	cytosol	22.07	44.44
CDY31322	Canola	cytosol	22.21	44.24
PGSC0003DMT400073845	Potato	cytosol	38.36	43.71
VIT_03s0017g00300.t01	Wine grape	nucleus	26.65	40.74
KRH42098	Soybean	nucleus	24.5	40.0
PGSC0003DMT400079004	Potato	cytosol	27.19	39.53
CDY21586	Canola	cytosol	15.07	38.75
AT5G09540.1	Thale cress	nucleus	14.54	38.57
AT5G64360.7	Thale cress	nucleus	23.96	38.36
Bra009389.1-P	Field mustard	cytosol	15.07	38.23
CDY69792	Canola	cytosol	15.07	38.23
KRH21766	Soybean	nucleus	25.3	37.68
KRH49811	Soybean	nucleus	23.82	37.58
Bra024289.1-P	Field mustard	nucleus	22.75	36.82
CDX84519	Canola	nucleus	23.42	36.63
KRH10601	Soybean	nucleus	24.5	36.62
PGSC0003DMT400024179	Potato	cytosol	17.23	34.32
CDY58269	Canola	nucleus	23.15	34.26
GSMUA_Achr3P06790_001	Banana	cytosol	13.86	31.69
GSMUA_Achr10P...	Banana	cytosol	17.23	30.4
EER92178	Sorghum	nucleus	16.29	30.02
Zm00001d047214_P001	Maize	extracellular	15.75	29.47
TraesCS4D01G156000.1	Wheat	nucleus	15.88	29.43
HORVU4Hr1G039650.1	Barley	nucleus	15.75	29.4
CDY46799	Canola	nucleus	15.48	29.34
Zm00001d029409_P001	Maize	nucleus, peroxisome, plastid	15.61	29.29
GSMUA_Achr1P21390_001	Banana	cytosol	15.61	28.78
TraesCS4B01G160100.1	Wheat	cytosol	15.48	28.68
Os03t0392400-01	Rice	nucleus	15.61	28.64
TraesCS4A01G160900.1	Wheat	cytosol	15.34	28.5
Os07t0620200-01	Rice	cytosol, mitochondrion, nucleus	14.27	26.77
PGSC0003DMT400092251	Potato	cytosol	12.65	26.04
KXG36712	Sorghum	cytosol	15.21	25.98
Zm00001d022168_P001	Maize	cytosol, mitochondrion, peroxisome	15.34	25.79
TraesCS2B01G191300.1	Wheat	cytosol	13.19	25.0
HORVU2Hr1G030250.2	Barley	cytosol	13.06	24.94
TraesCS2A01G165100.1	Wheat	cytosol	12.92	24.55
TraesCS2D01G172200.1	Wheat	cytosol	12.79	24.3
Os09t0463700-01	Rice	nucleus	11.71	23.39
KXG35797	Sorghum	nucleus	11.57	22.4
Zm00001d020762_P001	Maize	nucleus	13.19	22.27
Zm00001d047043_P001	Maize	nucleus	12.92	22.17
EES14021	Sorghum	nucleus	12.79	21.49
TraesCS5B01G242900.1	Wheat	cytosol	14.4	20.3
HORVU5Hr1G055620.1	Barley	cytosol, nucleus, plastid	7.94	19.93
TraesCS5D01G252200.1	Wheat	cytosol, nucleus, plastid	14.13	19.92
HORVU5Hr1G069570.1	Barley	nucleus	14.27	19.41
CDY45473	Canola	nucleus	19.52	19.39
TraesCS5A01G245400.1	Wheat	cytosol, nucleus, plastid	13.59	19.13
AT1G62970.1	Thale cress	nucleus	20.05	18.7
CDY45966	Canola	nucleus	18.71	18.68
Bra027007.1-P	Field mustard	nucleus	18.17	18.1
PGSC0003DMT400041631	Potato	cytosol, mitochondrion, nucleus, plastid	7.94	17.3

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:102593259	MapMan:12.5.1.16.2	ncoils:Coil	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M1D758	PFAM:PF00226	EnsemblPlantsGene:PGSC0003DMG400033592
PGSC:PGSC0003DMG400033592	EnsemblPlants:PGSC0003DMT400083794	ScanProsite:PS00636	PFscan:PS50076	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI000296A47E	RefSeq:XP_006351734.1	SEG:seg	:	:	:

Description

Dnajc14 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400033592]

Coordinates

chr1:-:82387926..82390442

Molecular Weight (calculated)

81768.8 Da

IEP (calculated)

8.093

GRAVY (calculated)

-0.697

Length

743 amino acids

Sequence
(BLAST)

001: MEHPFFMNGA GNTSRAEAIR WLSIAEKLLT NRDLVGSKSF ATRAHESDPT LLPADQILAI VDTLIAGDKR INNQHLDYYS ILQIPSNQTH DSELIANQYR
101: RLALLLNPQK NNFPFSDHAF HLVVDAWSVL SNAFRRSVYD KEIGFFLNLN PVSSPPPPTN NPVGFMQQSS MIFQSQPQSH PVSSVPSSSR ERQTVTFLQD
201: PQPQSMTSVS SLTREQQPVT FLSRNQTQPV NSTMLSPDRE QHPFTFGSST TRAQQQVAFA ESTRGQQQVA FAESTRGPQQ VAFAESTRGP QQVAFVKTTR
301: GQQQVASVES TRGQHRVASM ESRREQQEVA SVHQQGNKQA PQRNEGLLGN NQNFSASTGR NVNNEGLFGN NQNHSVSTGG NVNDAGLFGN NQNHSASISK
401: NVNNEGLFGN NQNQSASTNR NVNNEGLFGS NQNQSANTSH NNEVFFGNNQ SHSVSTSNNN VTGKERSADA SSHAVPSFWT ACPYCYLMYE YPLEYVDCTL
501: RCQKCKRAFQ AVKIASPPPI IEGQEAYFCC WGFMPLGFSL EIFKKYKGNI SSWTPFAPMF NKHGGVRKPA APRVYIDDYE DVFLGLSESS EESDEDWKGD
601: NKMKKAKSGK RKSKRIRRKK AKIQKSDKGK NVVVNAGDDV QDVSATQGGV EVPNVTTAQS SKRAGNTRRQ AGRVTKDVGK LDLNVEFSNE VEEPPAPGMG
701: QGNGAGTGED GNIEGIEFFE GLDEFLSSLP ILNAVGDDKV KAA

Best Arabidopsis Sequence Match ( AT5G64360.4 )
(BLAST)

001: MVGGRGGVGG GGGNRVEADQ WLVTSEKLLA SSDLQGAKTF AIRACEADPT RAEAADYILA ICDILLAGET RLGDSNLPDW YAVLRLGRLA QNPEHVATQY
101: RRLALLLNPS VNRLPFADRA LKIVSDAWFV LSDPFKKSFY DRELQLSQLG QSGFHPQTQS HQNFQWEPSS STAVYPPPRS QSQAGTSADP MATSFWTACP
201: YCFVLFEYPK AYEECTLKCQ ECRRAFQAVT IPKPPVDKKD DEDVYFCSWA LFPLGFSGEF QAPSWSPISP LFACPLQKLD GEPKKRKEPG PPRIYYDDDD
301: IYVAISDGDD AGDDGDWQDV VQVNKKTNVG KGKETYVRSN KKHGVEEVQN VESISSASNH AVSIASNAAA VGSSTGVMSK PGSYITRKRM GTGAKNLGRL
401: DLNVEFSNEV EEPGVAGGGN AGNGIGSNRE VDNMEGIGFF EGLDEFLNSL PILSVVGDDK IKAT

Arabidopsis Description

AT5G64360 protein [Source:UniProtKB/TrEMBL;Acc:Q9FMF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.