Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plasma membrane 2
- extracellular 2
- endoplasmic reticulum 1
- golgi 1
- vacuole 1
- plastid 3
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P26830_001 | Banana | plastid | 31.0 | 53.79 |
| KRH57376 | Soybean | plasma membrane | 41.92 | 53.63 |
| Solyc08g078890.1.1 | Tomato | extracellular, golgi, plasma membrane | 67.25 | 52.74 |
| KRH04104 | Soybean | extracellular, plasma membrane | 40.61 | 52.25 |
| PGSC0003DMT400079355 | Potato | extracellular | 27.95 | 46.72 |
| VIT_02s0154g00310.t01 | Wine grape | extracellular, plasma membrane | 48.03 | 45.27 |
| PGSC0003DMT400007468 | Potato | extracellular | 42.36 | 40.25 |
| CDY70376 | Canola | extracellular | 50.22 | 40.21 |
| GSMUA_Achr4P29020_001 | Banana | plastid | 36.68 | 40.19 |
| AT1G62500.1 | Thale cress | extracellular | 51.97 | 40.07 |
| CDY12951 | Canola | extracellular | 47.16 | 39.13 |
| Bra027040.1-P | Field mustard | extracellular | 50.22 | 37.58 |
| PGSC0003DMT400035207 | Potato | extracellular | 45.85 | 26.92 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400093516 | EnsemblPlantsGene:PGSC0003DMG400043087 | Gene3D:1.10.110.10 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | InterPro:Hydrophob_seed |
| PANTHER:PTHR31731 | PANTHER:PTHR31731:SF25 | PFAM:PF14547 | PGSC:PGSC0003DMG400043087 | PRINTS:PR01217 | SEG:seg |
| SMART:SM00499 | SUPFAM:SSF47699 | UniParc:UPI000294D58A | UniProt:M1DS44 | MapMan:35.2 | : |
Description
Proline-rich cell wall protein [Source:PGSC_GENE;Acc:PGSC0003DMG400043087]
Coordinates
chr8:+:52516605..52518331
Molecular Weight (calculated)
22857.7 Da
IEP (calculated)
8.792
GRAVY (calculated)
0.209
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRPSPGRPH PPPSTPRPHP PTTKPPPHHG GPPPRVLPPI VFPPPVVSPP ITRPPPGILP PIVNPPGIIP PITRPPGIIP PITRPPGIIP PITNPPGGGG
101: GFPPPSGGGG GGYPPYAPPS GGAPPGGGGG GGIPGIVPPP PVTCPIDALK LGLCLDVLGG LVHIGIGNPV EHICCPVLQG LLELEAAICL CTTIRLKLLN
201: LNIFLPLALS VLATCGLTPP PGFVCPPLV
101: GFPPPSGGGG GGYPPYAPPS GGAPPGGGGG GGIPGIVPPP PVTCPIDALK LGLCLDVLGG LVHIGIGNPV EHICCPVLQG LLELEAAICL CTTIRLKLLN
201: LNIFLPLALS VLATCGLTPP PGFVCPPLV
001: MGSRVLASFF VFLIFTVITL PPTIQACTPC TRPHPPVPKP PQHGGGGGGG SKPPPHHGGK GGGKPPPHGG KGGGPPHHGG GGGGGGKSPP VVRPPPVVVR
101: PPPIIRPPPV VYPPPIVRPP PITRPPIIIP PIQPPPVTTP PGLLPPITTP PGLLPPVTTP PGLLPPVTTP PGLLPPIINP PPVTVPPPSS GYPPYGPPSG
201: GGGGGGGKQP TCPINALKLG ACVDVLGGLI HIGLGNPVEN VCCPVLQGLL ELEAAVCLCT TIRLKLLNLN IFIPLALQAL ITCGINPPSG FVCPPLT
101: PPPIIRPPPV VYPPPIVRPP PITRPPIIIP PIQPPPVTTP PGLLPPITTP PGLLPPVTTP PGLLPPVTTP PGLLPPIINP PPVTVPPPSS GYPPYGPPSG
201: GGGGGGGKQP TCPINALKLG ACVDVLGGLI HIGLGNPVEN VCCPVLQGLL ELEAAVCLCT TIRLKLLNLN IFIPLALQAL ITCGINPPSG FVCPPLT
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SXE7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.