Factsheet for Solyc01g108320.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400066354	Potato	cytosol	90.0	95.5
Solyc04g080330.2.1	Tomato	extracellular	82.12	75.28
Solyc02g090470.2.1	Tomato	extracellular	62.73	61.98
KRH71183	Soybean	extracellular, golgi, vacuole	61.52	61.14
Solyc02g090450.2.1	Tomato	extracellular	61.82	61.08
KRH50238	Soybean	extracellular	60.61	59.17
VIT_03s0063g01040.t01	Wine grape	extracellular	58.79	58.97
KRH71182	Soybean	extracellular	60.3	58.88
CDX77234	Canola	extracellular	58.79	58.61
AT1G49570.1	Thale cress	extracellular	60.61	57.14
Bra014200.1-P	Field mustard	extracellular	61.21	54.74
CDY16509	Canola	extracellular	61.21	54.74
Solyc02g084800.2.1	Tomato	cytosol, extracellular, nucleus, plastid	40.91	49.45
Solyc01g015080.2.1	Tomato	extracellular	48.79	48.79
Solyc01g006310.2.1	Tomato	extracellular, golgi	48.48	48.48
Solyc11g072920.1.1	Tomato	extracellular	46.97	47.4
Solyc04g076770.2.1	Tomato	extracellular	46.06	45.92
Solyc01g058520.2.1	Tomato	extracellular	46.06	45.78
Solyc01g006300.2.1	Tomato	extracellular	44.85	45.54
Solyc02g084790.2.1	Tomato	extracellular	45.45	45.18
Solyc04g080760.2.1	Tomato	extracellular	45.15	45.02
Solyc02g062510.2.1	Tomato	extracellular	45.15	45.02
Solyc10g078890.1.1	Tomato	extracellular	46.06	44.97
Solyc03g033710.2.1	Tomato	extracellular	45.15	44.74
Solyc02g084780.2.1	Tomato	endoplasmic reticulum, extracellular	44.55	44.28
Solyc03g033690.1.1	Tomato	extracellular	44.24	44.24
Solyc01g006290.2.1	Tomato	extracellular	43.33	43.73
Solyc05g010330.2.1	Tomato	extracellular	42.73	40.63
Solyc11g010120.1.1	Tomato	extracellular	40.61	39.76

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	UniProt:K4B348	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435
ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF34	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc01g108320.2	EnsemblPlants:Solyc01g108320.2.1
TMHMM:TMhelix	UniParc:UPI0002768248	:	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4B348]

Coordinates

chr1:+:95673715..95675247

Molecular Weight (calculated)

36785.0 Da

IEP (calculated)

5.803

GRAVY (calculated)

-0.096

Length

330 amino acids

Sequence
(BLAST)

001: MASRSLLPCL TVLFCMISIM APLTFGQLDY SYYDRACPVL PRIIRWNVWS ALRNDSRIAA SLLRLHFHDC FVNGCDGSVL LDDTNDFKGE KNAAPNRNSV
101: RGFETIDNIK ADLERACPFT VSCVDILTLA AREVVVMSGG PFWPVLLGRR DGLTASEKAA NEQLPSPFEP LDKIAAKFTD KGLNLRDVVV LSGAHTIGFA
201: QCFTFKRRLF NYQDSGKPDP LLDYSMLLNL QSTCPEEGPN SKITPLDNQS VTRFDNAYYR NLMNNTGLLE SDQALMSNSE TADMVKAYSL YPYLFYQDFA
301: ASMVKLGNIG VLTGESGQIR KVCGSVNYYY

Best Arabidopsis Sequence Match ( AT1G49570.1 )
(BLAST)

001: MDHKMSMYLF VSYLAIFTLF FKGFVSSFPS GYNNGYNNGH GHGLTSNLNY RFYDRSCPRL QTIVKSGVWR AFKDDSRIAA SLLRLHFHDC FVNGCDGSIL
101: LNDSEDFKGE KNAQPNRNSV RGFEVIEDIK SDIESSCPLT VSCADIVALA AREAVVLTGG PFWPVPLGRR DSLTASEQAA NTNLPSPFEA LENITAKFVT
201: LGLDLKDVVV LSGAHTIGFA QCFVIKHRLF NFKGSGQPDP NLAASSALLS KLKDTCPNVD SSDSKLAALD AASSVKFDNA YYVNLMNNIG LLDSDQTLMT
301: DPTAAALVKS YSENPYLFSR DFAVSMVKMG NIGVMTGSDG VIRGKCGFPG

Arabidopsis Description

PER10Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178WK78]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.