Skip to main content
crop-pal logo
Tomato
Search for another protein from :
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 2
  • plastid 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:cytosol
EpiLoc:plastid
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:plasma membrane, plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:golgi
 nucleus: 28394025
msms PMID: 28394025 doi
AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400011466 Potato cytosol, golgi, plastid 88.75 88.19
PGSC0003DMT400011469 Potato cytosol, golgi, plastid 84.93 88.11
Solyc02g085660.1.1 Tomato extracellular, golgi, plastid 57.75 55.51
KRH26249 Soybean cytosol, golgi, plastid 51.59 50.52
KRH55242 Soybean cytosol, golgi, vacuole 50.53 49.79
VIT_16s0022g01970.t01 Wine grape cytosol, golgi, plastid 50.32 49.79
VIT_16s0115g00360.t01 Wine grape golgi 50.53 49.58
VIT_04s0023g01290.t01 Wine grape cytosol, golgi, plastid 52.23 49.0
KRH55241 Soybean plastid 49.89 48.96
AT2G18560.1 Thale cress golgi 39.28 48.68
KRH65396 Soybean mitochondrion 12.74 46.51
AT2G18570.1 Thale cress extracellular, golgi 46.28 46.38
VIT_04s0023g01240.t01 Wine grape cytosol 49.04 46.11
CDY29242 Canola golgi, plasma membrane 40.76 45.71
CDY36488 Canola golgi, plasma membrane 40.76 45.71
Bra024461.1-P Field mustard cytosol, golgi, plastid 44.59 44.78
CDY43896 Canola golgi, plasma membrane 44.37 44.66
CDY13025 Canola golgi, plasma membrane, plastid 44.37 44.47
Bra028098.1-P Field mustard golgi, plasma membrane 45.01 44.44
Solyc04g080010.2.1 Tomato cytosol, golgi, plastid 43.31 42.86
GSMUA_Achr1P05070_001 Banana extracellular, golgi 31.42 41.23
GSMUA_Achr10P... Banana cytosol 34.18 40.55
Solyc10g009580.2.1 Tomato cytosol 40.98 40.55
TraesCS7B01G425900.1 Wheat cytosol 24.63 40.42
Solyc01g095620.2.1 Tomato plastid 40.34 39.92
GSMUA_Achr3P03470_001 Banana endoplasmic reticulum, golgi 30.57 38.4
GSMUA_Achr1P05060_001 Banana golgi, peroxisome, plastid 26.33 38.15
GSMUA_Achr6P14270_001 Banana endoplasmic reticulum, golgi, plastid 34.82 37.61
KRH65395 Soybean golgi, peroxisome, plastid 38.64 37.22
KRH65399 Soybean cytosol, golgi, plastid 38.64 37.14
EES08692 Sorghum plastid 37.79 37.08
TraesCS7A01G514300.1 Wheat plastid 35.46 36.95
KRH65397 Soybean cytosol, golgi, plastid 38.22 36.73
GSMUA_Achr2P06330_001 Banana cytosol 17.62 36.73
HORVU7Hr1G114890.1 Barley plastid 37.58 36.72
Zm00001d053514_P001 Maize extracellular 37.58 36.49
TraesCS7B01G430400.1 Wheat plastid 37.16 36.46
TraesCS2A01G070800.1 Wheat cytosol, endoplasmic reticulum, golgi 38.85 36.31
EER98757 Sorghum plastid 36.94 36.25
TraesCS7B01G429700.1 Wheat plastid 36.94 36.25
TraesCS7D01G502500.1 Wheat plastid 36.94 36.25
TraesCS3B01G034800.1 Wheat cytosol 36.31 36.15
Zm00001d007486_P001 Maize extracellular 36.52 36.13
Os11t0599200-01 Rice plasma membrane 37.58 36.12
OQU77629 Sorghum cytosol 27.18 36.06
TraesCS7B01G428300.1 Wheat plastid 36.73 36.04
TraesCS2A01G478900.1 Wheat cytosol 35.88 35.96
GSMUA_Achr10P... Banana extracellular, golgi, plastid 27.18 35.96
OQU76647 Sorghum plastid 36.94 35.95
TraesCS6A01G116400.1 Wheat cytosol 36.73 35.89
TraesCS2D01G069700.1 Wheat cytosol, peroxisome, plastid 38.43 35.84
TraesCS7B01G416800.1 Wheat plastid 36.52 35.83
HORVU2Hr1G024600.3 Barley cytosol 25.9 35.78
TraesCS7B01G424600.1 Wheat plastid 37.16 35.71
TraesCS6B01G144400.1 Wheat cytosol 36.52 35.68
TraesCS4B01G055800.1 Wheat plastid 36.52 35.54
TraesCS6D01G105400.1 Wheat cytosol 36.31 35.48
TraesCS3D01G032200.1 Wheat cytosol 35.67 35.44
TraesCS7D01G504600.2 Wheat plastid 36.09 35.42
TraesCS2B01G084800.1 Wheat plastid 37.58 35.12
TraesCS2A01G140300.1 Wheat extracellular, golgi, peroxisome 35.24 35.1
EES08777 Sorghum plastid 34.82 35.04
Os02t0242100-01 Rice cytosol 35.88 34.92
TraesCS2B01G503100.1 Wheat cytosol, peroxisome, plastid 35.88 34.85
TraesCS4A01G258900.1 Wheat plastid 35.88 34.85
TraesCS3B01G034700.1 Wheat cytosol 34.39 34.84
Zm00001d048711_P001 Maize cytosol 36.31 34.83
HORVU6Hr1G020960.1 Barley cytosol 35.46 34.79
KXG29899 Sorghum cytosol 37.16 34.79
TraesCS3D01G001400.1 Wheat cytosol 36.09 34.62
TraesCS2D01G478200.1 Wheat cytosol, peroxisome, plastid 35.03 34.45
TraesCS3B01G050300.1 Wheat cytosol 35.24 34.44
TraesCS2D01G478000.1 Wheat cytosol, peroxisome, plastid 35.46 34.43
TraesCS2D01G143000.1 Wheat plastid 36.09 34.41
TraesCS2A01G138500.1 Wheat plastid 35.67 34.36
Os01t0620800-01 Rice cytosol, peroxisome, plastid 36.94 34.32
TraesCS4D01G056200.1 Wheat plastid 35.67 34.29
TraesCS2A01G478700.1 Wheat cytosol 35.24 34.23
TraesCS3B01G033400.1 Wheat cytosol 35.03 34.09
TraesCS3D01G031100.1 Wheat cytosol 35.03 34.09
TraesCS3A01G048400.1 Wheat mitochondrion 34.82 34.02
HORVU2Hr1G024630.1 Barley cytosol, endoplasmic reticulum, golgi, plastid 35.67 34.01
EES01087 Sorghum cytosol, golgi, plastid 35.46 33.94
EES10040 Sorghum cytosol, peroxisome, plastid 35.67 33.8
TraesCS2A01G138400.1 Wheat plastid 27.81 33.59
TraesCS3B01G013100.1 Wheat cytosol 35.03 33.47
TraesCS2B01G162300.1 Wheat mitochondrion 35.88 33.47
TraesCS2D01G141400.1 Wheat plastid 35.24 33.4
Zm00001d048925_P001 Maize plastid 35.46 33.27
TraesCS2B01G162400.1 Wheat plastid 34.82 33.27
Os02t0243300-01 Rice cytosol 34.39 33.13
Os05t0215300-01 Rice mitochondrion 34.18 32.86
EES09959 Sorghum plastid 28.66 32.77
EES06270 Sorghum cytosol 34.18 32.72
KXG29900 Sorghum plastid 35.03 32.67
TraesCS6B01G068000.1 Wheat cytosol 34.39 32.66
TraesCS2A01G140200.1 Wheat plastid 35.88 32.63
TraesCS6B01G068400.1 Wheat cytosol, peroxisome, plastid 34.18 32.46
Os02t0242900-00 Rice cytosol, peroxisome, plastid 26.11 32.45
TraesCS6A01G051200.1 Wheat cytosol, extracellular, golgi, mitochondrion 33.97 32.32
Zm00001d053513_P001 Maize plastid 34.39 32.21
TraesCS6A01G051300.1 Wheat cytosol 33.76 32.12
Zm00001d037721_P001 Maize extracellular, golgi 32.27 31.93
TraesCS6B01G068300.1 Wheat cytosol, extracellular, golgi 33.33 31.78
TraesCS3B01G034900.1 Wheat cytosol, endoplasmic reticulum, peroxisome 23.14 31.32
TraesCS3A01G010300.1 Wheat plastid 36.09 31.25
Os02t0242550-00 Rice plastid 34.39 31.09
HORVU6Hr1G009880.1 Barley cytosol, peroxisome 34.61 30.93
TraesCSU01G110200.1 Wheat cytosol, mitochondrion, plastid 34.39 30.51
HORVU3Hr1G004850.2 Barley mitochondrion 35.67 30.16
HORVU2Hr1G107750.1 Barley endoplasmic reticulum, golgi 32.7 29.96
TraesCS2B01G503300.1 Wheat cytosol 17.62 29.43
TraesCS6B01G068100.1 Wheat plastid 16.99 27.78
GSMUA_Achr1P13630_001 Banana golgi, mitochondrion, plasma membrane 26.96 19.45
Protein Annotations
Gene3D:3.40.50.2000MapMan:50.2.4GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0008150GO:GO:0008152GO:GO:0016740GO:GO:0016757GO:GO:0016758
GO:GO:0043231GO:GO:0080043GO:GO:0080044UniProt:K4B6I8PFAM:PF00201ScanProsite:PS00375
PANTHER:PTHR11926PANTHER:PTHR11926:SF223SUPFAM:SSF53756EnsemblPlantsGene:Solyc02g063000.2EnsemblPlants:Solyc02g063000.2.1InterPro:UDP_glucos_trans
InterPro:UDP_glycos_trans_CSUniParc:UPI000276846DSEG:seg:::
Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:K4B6I8]
Coordinates
chr2:-:35019139..35020978
Molecular Weight (calculated)
52874.2 Da
IEP (calculated)
6.107
GRAVY (calculated)
-0.134
Length
471 amino acids
Sequence
(BLAST)
001: MDSTQLHVAI FSSPGMGHLI PVLVLGNQLA THHNIKITIL TITTNSSSPE IEFLKKKKNI EIIHVPSVDI SHLIDSNTKV LTQLRLMVRE ALPGIRSVIA
101: SMNHRLDALI VDIFGTQILP IAQEFNIAKY VFHTTSAWAL ALFIYLQVLD QKTEGEYVDL KQPLEIPGCK ALRPDDVVDP MMDRSDQQYH EYLKLTIEYT
201: CFDGILINTW EDLEGETIKA LRSNEKLQQG LKVPLPIYPI GPLRRTVEIT ERDEVIQWLD KQNYESILFV SFGSGGALSS QQMIELAWGL ELSQQKFVWV
301: VRPPSDGDPD NAYLKSNGSD TRGTFEYLPE GFLTRTKDMG LVVPMWANQV EILSHSSVGG FMSHCGWNST VESLTNGVPM IAWPLHAEQK MNAAMLTEEL
401: GVAIRPAVLP TKKMVKREEI QGMVRILMDT KEGKSIREKA KKLKISAENA LSEGGSSYNS MCELVKDIRT R
Best Arabidopsis Sequence Match ( AT2G18570.1 )
(BLAST)
001: MDQPHALLVA SPGLGHLIPI LELGNRLSSV LNIHVTILAV TSGSSSPTET EAIHAAAART ICQITEIPSV DVDNLVEPDA TIFTKMVVKM RAMKPAVRDA
101: VKLMKRKPTV MIVDFLGTEL MSVADDVGMT AKYVYVPTHA WFLAVMVYLP VLDTVVEGEY VDIKEPLKIP GCKPVGPKEL METMLDRSGQ QYKECVRAGL
201: EVPMSDGVLV NTWEELQGNT LAALREDEEL SRVMKVPVYP IGPIVRTNQH VDKPNSIFEW LDEQRERSVV FVCLGSGGTL TFEQTVELAL GLELSGQRFV
301: WVLRRPASYL GAISSDDEQV SASLPEGFLD RTRGVGIVVT QWAPQVEILS HRSIGGFLSH CGWSSALESL TKGVPIIAWP LYAEQWMNAT LLTEEIGVAV
401: RTSELPSERV IGREEVASLV RKIMAEEDEE GQKIRAKAEE VRVSSERAWS KDGSSYNSLF EWAKRCYLVP
Arabidopsis Description
UGT72D1UDP-glycosyltransferase 72D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU72]
SUBAcon: [golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.