Factsheet for Solyc02g081640.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045728	Potato	nucleus	80.99	79.97
Bra033600.1-P	Field mustard	endoplasmic reticulum	13.9	31.41
TraesCS6B01G361300.1	Wheat	nucleus	11.06	29.32
HORVU6Hr1G080290.6	Barley	nucleus	10.5	28.03
TraesCS6D01G309500.4	Wheat	nucleus	10.5	27.82
KRG92007	Soybean	nucleus	19.01	25.82
CDY56766	Canola	nucleus	19.57	25.75
CDY12124	Canola	nucleus	21.13	25.3
CDX90315	Canola	nucleus	20.57	24.49
GSMUA_Achr2P23110_001	Banana	nucleus	4.96	24.48
Bra010701.1-P	Field mustard	nucleus	20.43	24.41
KRH34776	Soybean	nucleus	17.16	24.3
CDY16866	Canola	vacuole	18.3	23.71
CDX72715	Canola	nucleus	17.16	23.31
CDX87111	Canola	nucleus	17.3	22.59
AT4G39160.2	Thale cress	nucleus	19.57	22.12
VIT_03s0038g04460.t01	Wine grape	nucleus	30.07	20.13
KRH77688	Soybean	nucleus	25.25	19.04
KRH27726	Soybean	nucleus	25.25	18.78
Zm00001d017507_P001	Maize	nucleus	12.62	16.76
OQU75762	Sorghum	nucleus	17.02	14.87
TraesCS1D01G314900.1	Wheat	nucleus	16.03	14.34
TraesCS6A01G330400.1	Wheat	nucleus, plastid	10.21	14.31
KXG24287	Sorghum	nucleus	15.74	14.23
TraesCS1B01G326700.2	Wheat	nucleus	15.89	14.21
HORVU1Hr1G067100.2	Barley	nucleus	15.74	14.1
TraesCS1A01G314400.2	Wheat	nucleus	15.74	14.09
Zm00001d035113_P001	Maize	nucleus	15.46	13.01
Zm00001d017505_P003	Maize	plastid	15.32	9.51
Os03t0840500-00	Rice	cytosol, nucleus	4.11	6.79

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.4.3.2	MapMan:15.5.2.2	GO:GO:0000126	GO:GO:0001026	GO:GO:0001156
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006359	GO:GO:0006383
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0070898
InterPro:Homeobox-like_sf	InterPro:IPR017884	UniProt:K4BA34	PFAM:PF15963	PFscan:PS51293	PANTHER:PTHR22929
InterPro:SANT/Myb	InterPro:SANT_dom	SMART:SM00717	SUPFAM:SSF46689	EnsemblPlantsGene:Solyc02g081640.2	EnsemblPlants:Solyc02g081640.2.1
InterPro:TFIIIB_B''	UniParc:UPI0002767962	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2:+:45513654..45519573

Molecular Weight (calculated)

78528.3 Da

IEP (calculated)

4.484

GRAVY (calculated)

-0.832

Length

705 amino acids

Sequence
(BLAST)

001: MIFLLEVLQR LAGGKFQPKA KPRPVKKGPA VASSSLTSKP TGDTVATDYS EGFKSAKNSQ NCDEQSPVLA EPSLGRPLAA ETLVPSVGSS LDASMVITDN
101: NEDWKSCFEK SEGENADIYI GLDSFDDLLP HSSGIDPSAA HAAGAEKRQE QLLVPVSSVD GSAHSASNLQ SDEVAAGQDP LTFQASVLSV SGSCQMETDT
201: YSFLEADILG VTTISGQSRR FQPKPKLQVY RERYDTIIPD LDVGESVPCL PDSQSVHSEM DFVNSEKGHG LPAADVLDFS VRGFDIITES AHDFPVHEDY
301: VVEASLPDAD IPENHSEATS QMPEESVPQR PKNKKQKFPA SELSAISEEN GESRLLRSRR KSVNASRLVD ESDEDVIGDG EYVPEHPNDS VTIGNDEEFL
401: VENDSQGKKV QKKSKKTVTK EGKRVRKSKK TAEASDQAAN KKPKKFSHST RQKRRTVDKA LLEAPMDEID YSKVPIKDLI LLAEHRERLA KKDAAVSQMP
501: PTTTDQSAGA SVSNYDEDET YASDEDGEAD DHNKSTMGED TSSYFNYQTY MDKTPSTRWS KQDTELFYEA VQQFGTDLSL IQQLFPGRTR RQLKLKYKKE
601: ERQNPFRLHD VLTNRSKDHS HFERVIEHLK QIEAEELQYA DKDESIDLTG EEEMVGNQEI CEEAKSEHVE EKEVETVEQD VPNPVKEYDD DEDDFMKWSQ
701: YTSEV

Best Arabidopsis Sequence Match ( AT4G39160.2 )
(BLAST)

001: MDLDFDDQPS DHAAPAVRAG ARFKPKGRPQ PKKKQVSLST TQTTLSPDVA QEKLSTQSED LVPLDGSSEI PSNALPSETN VPDSGSINKS TIGTLSEENE
101: DAFPRGVHWS VKPSILRACN NVNLVGNRRD DGIEATTSFP DDPRTQDSAI FGDYVTPETG ADEGRVDMET LDIVQEEGTT SSYVQHTGKL QPKPRLLETV
201: VEEPEPHYSA GDTGYFPMGT NESEFMANVE SRNGFSTYED LQEEELNIPE APRETVGEME AQNASGGWEQ EEQGVSPCIN NTVTGEEENC MGNTVEEQSK
301: RESKTGKSKR ATSRKRKKTS EEPNKSSEKT EQKKFKHSSR RQKRTLEKEL LETPDHEIRS LPLRDMLRLV EYKEWMQKKE AKGAGVQPSQ ESNNMNGSGS
401: QYHSQGFDEE DEFGDFGIES SEYQENNVVK PDSPVNYQTY MNKTSRTRWS KEDTELFYEG IQEFGSNLSM IQQLFPERTR EQMKLKFKLE ERRNPLKLND
501: ALSSRSKHFT HFKNVIKKLQ QEAAAAKEGE EEEEAGAEAE TTDVPENEEP EKSEETERAS DGVAAGVKES DGGDVENGVR SDGGDECDDD EDFWNSYKSD
601: IICKRHAKLA MNTFVIFTNS KTRP

Arabidopsis Description

Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JVA4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.