Factsheet for Solyc02g082380.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g082390.1.1	Tomato	nucleus	82.43	65.12
PGSC0003DMT400091980	Potato	nucleus	61.71	33.99
TraesCS7B01G093600.1	Wheat	nucleus	17.57	21.67
TraesCS1B01G283000.1	Wheat	nucleus	17.57	21.67
Solyc05g013420.1.1	Tomato	nucleus	18.02	21.62
Solyc10g019150.1.1	Tomato	nucleus	15.32	20.73
Solyc11g013560.1.1	Tomato	nucleus	18.47	19.9
TraesCS7A01G188800.1	Wheat	nucleus	16.22	19.89
TraesCS7D01G189800.2	Wheat	nucleus	17.12	19.19
Solyc11g050730.1.1	Tomato	nucleus	16.67	18.41
Zm00001d006791_P001	Maize	nucleus	12.61	18.3
HORVU7Hr1G028140.1	Barley	nucleus	17.12	17.59
HORVU7Hr1G038390.1	Barley	mitochondrion, nucleus, plastid	16.22	17.56
KXG21281	Sorghum	nucleus	13.06	16.76
Solyc05g013430.1.1	Tomato	nucleus	15.32	16.19
Zm00001d050594_P001	Maize	nucleus	14.86	15.64
Solyc11g013620.1.1	Tomato	plasma membrane	17.57	15.41
HORVU7Hr1G024150.1	Barley	nucleus	15.77	14.71
KXG21283	Sorghum	nucleus	15.77	14.34
TraesCS7B01G019400.1	Wheat	nucleus	15.32	14.23
Zm00001d010889_P001	Maize	plastid	15.32	14.11
TraesCS7A01G120900.1	Wheat	nucleus	16.22	13.95
OQU77390	Sorghum	nucleus	15.32	13.93
EER94504	Sorghum	nucleus	18.02	13.89
TraesCS7B01G019200.1	Wheat	nucleus	17.12	13.87
TraesCS7D01G108000.1	Wheat	nucleus	17.12	13.87
TraesCS7D01G108100.1	Wheat	nucleus	16.67	13.55
TraesCS7D01G118600.1	Wheat	nucleus	16.67	13.5
TraesCS1D01G362000.1	Wheat	nucleus	18.47	13.49
Zm00001d045162_P001	Maize	nucleus	17.57	13.45
KXG36349	Sorghum	nucleus	22.07	13.35
EER88196	Sorghum	nucleus	18.92	13.29
TraesCS7A01G121100.1	Wheat	nucleus	16.22	13.14
EER89299	Sorghum	nucleus	18.02	13.07
EES18995	Sorghum	nucleus	16.22	13.04
EES18996	Sorghum	nucleus	16.67	12.85
EER89573	Sorghum	nucleus	18.02	12.66
Zm00001d024809_P001	Maize	nucleus	16.22	12.59
OQU76057	Sorghum	nucleus	17.12	12.38
Zm00001d021415_P001	Maize	nucleus	18.92	12.17
EER88198	Sorghum	nucleus	17.12	11.95
EER89387	Sorghum	nucleus	17.12	11.95
OQU77389	Sorghum	nucleus	17.57	11.68
TraesCS1B01G374300.1	Wheat	nucleus	18.02	11.43
HORVU7Hr1G025580.1	Barley	cytosol, nucleus, plastid	15.32	11.41
HORVU1Hr1G080380.1	Barley	nucleus	17.12	11.28
TraesCS1A01G357600.1	Wheat	nucleus	17.57	11.14
KXG21278	Sorghum	nucleus	17.12	11.05
TraesCS7A01G135300.1	Wheat	nucleus	14.41	10.96
KXG21280	Sorghum	nucleus	17.12	10.67
Zm00001d024814_P001	Maize	nucleus	12.61	9.96
EES18997	Sorghum	nucleus	16.67	9.84
TraesCS2D01G567700.1	Wheat	nucleus	16.67	9.79
Zm00001d024810_P001	Maize	nucleus	17.12	9.74
TraesCS7D01G135500.1	Wheat	nucleus	17.12	9.48
TraesCS7A01G135000.1	Wheat	nucleus	18.02	9.32
TraesCS7B01G036500.1	Wheat	nucleus	18.02	9.3
OQU89906	Sorghum	nucleus	13.96	9.2
Os06t0173800-00	Rice	vacuole	13.51	9.17
TraesCS7B01G036700.1	Wheat	nucleus	17.57	9.11
TraesCS7D01G135200.1	Wheat	nucleus	17.57	9.09
TraesCS7D01G135000.1	Wheat	nucleus	17.57	9.07
TraesCS7D01G135700.1	Wheat	nucleus	17.57	8.97
TraesCS2B01G617700.1	Wheat	nucleus	15.77	8.77
TraesCS7A01G135400.1	Wheat	nucleus	16.67	8.6
TraesCS7A01G135100.1	Wheat	nucleus	16.22	8.39
TraesCS7A01G135200.1	Wheat	nucleus	16.22	8.39
TraesCS7D01G135300.1	Wheat	nucleus	16.22	8.37
TraesCS7D01G135600.1	Wheat	nucleus	11.71	7.3

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf
InterPro:IPR017930	UniProt:K4BAA8	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294
PANTHER:PTHR44042	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	EnsemblPlantsGene:Solyc02g082380.1	EnsemblPlants:Solyc02g082380.1.1
TIGRFAMs:TIGR01557	UniParc:UPI0002767F19	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2:-:46065666..46066504

Molecular Weight (calculated)

25014.9 Da

IEP (calculated)

10.208

GRAVY (calculated)

-0.988

Length

222 amino acids

Sequence
(BLAST)

001: MEEMKNLYIN LFKEAEMENP SINTNVVDNS SDKEANPNDT PPPPVQITHS RPHRRGIPWT EGEHSLFLMG LNKFGRGDWK SISRHYVVSK TPTQVASHAQ
101: KYFCRRNSKT PVDRRRPSIN DIQTVTVNST RTTTTTASNN NDQVGSLSRP FRYANYTFGG PTFANNSNGN FGIYHPGEAS GSNSFIMKQN NNNNNNDLHR
201: PVSPRPFHSM YLSSTKGNNP QV

Best Arabidopsis Sequence Match ( AT1G49010.1 )
(BLAST)

001: MESVVATWSR EEEKAFENAI ALHCVEEEIT EDQWNKMSSM VPSKALEEVK KHYQILLEDV KAIENGQVPL PRYHHRKGLI VDEAAAAATS PANRDSHSSG
101: SSEKKPNPGT SGISSSNGGR SGGSRAEQER RKGIPWTEEE HRLFLLGLDK FGKGDWRSIS RNFVISRTPT QVASHAQKYF IRLNSMNRDR RRSSIHDITT
201: VNNQAPAVTG GGQQPQVVKH RPAQPQPQPQ PQPQQHHPPT MAGLGMYGGA PVGQPIIAPP DHMGSAVGTP VMLPPPMGTH HHHHHHHLGV APYAVPAYPV
301: PPLPQQHPAP STMH

Arabidopsis Description

At1g49010 [Source:UniProtKB/TrEMBL;Acc:Q9M9A3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.