Factsheet for Solyc03g093700.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400054154	Potato	nucleus	88.8	87.85
Solyc03g093710.1.1	Tomato	nucleus	79.38	79.47
Solyc03g093720.1.1	Tomato	nucleus	28.25	79.0
Solyc03g093760.1.1	Tomato	nucleus	71.51	75.28
Solyc03g093740.1.1	Tomato	nucleus	23.36	63.84
Solyc03g093770.1.1	Tomato	golgi, plasma membrane	27.29	56.54
VIT_16s0013g00310.t01	Wine grape	nucleus	28.61	51.95
Bra005362.1-P	Field mustard	nucleus	23.6	48.41
VIT_16s0013g00650.t01	Wine grape	nucleus	32.06	46.22
TraesCS3A01G520700.1	Wheat	nucleus	15.38	44.79
KRG90121	Soybean	nucleus	23.6	35.87
CDY31670	Canola	nucleus	30.63	35.84
CDY25627	Canola	nucleus	31.7	35.66
CDX84255	Canola	nucleus	30.63	35.64
CDX89510	Canola	nucleus	31.47	34.83
AT2G22740.1	Thale cress	nucleus	31.7	33.67
Bra030212.1-P	Field mustard	nucleus	31.59	33.46
AT2G35160.3	Thale cress	nucleus	30.27	31.99
TraesCS3B01G590300.1	Wheat	nucleus	23.84	31.85
Solyc02g094520.2.1	Tomato	nucleus	22.88	28.36
Solyc09g082050.2.1	Tomato	nucleus	21.69	28.13
Solyc06g060960.1.1	Tomato	nucleus	35.16	27.96
Solyc10g077070.1.1	Tomato	nucleus	22.77	26.75
Solyc08g077940.1.1	Tomato	nucleus	33.02	26.71
EES05802	Sorghum	nucleus	25.03	26.68
Os04t0544100-01	Rice	nucleus	26.7	26.64
Solyc09g090810.1.1	Tomato	nucleus	21.57	26.01
Solyc12g096990.1.1	Tomato	nucleus	20.14	25.41
EES12588	Sorghum	nucleus	26.46	24.92
Solyc01g068370.2.1	Tomato	nucleus	9.77	24.05
TraesCS2B01G409600.1	Wheat	nucleus	26.82	23.39
TraesCS2D01G389100.1	Wheat	nucleus	26.7	23.33
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	26.58	22.12
Solyc09g090630.1.1	Tomato	nucleus	12.4	13.1
Solyc09g072890.1.1	Tomato	nucleus	12.51	12.73
Solyc06g083760.2.1	Tomato	nucleus	12.51	12.2
Solyc02g089970.2.1	Tomato	nucleus	14.54	8.08

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987
GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968
InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987
UniProt:K4BIP6	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867
PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF458	InterPro:PUA-like_sf	InterPro:Pre-SET_dom
InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG
SUPFAM:SSF82199	SUPFAM:SSF88697	EnsemblPlantsGene:Solyc03g093700.1	EnsemblPlants:Solyc03g093700.1.1	UniParc:UPI00027692D1	SEG:seg

Description

No Description!

Coordinates

chr3:-:55327924..55331671

Molecular Weight (calculated)

94610.6 Da

IEP (calculated)

6.713

GRAVY (calculated)

-0.622

Length

839 amino acids

Sequence
(BLAST)

001: MLGKKKLHQM VDTKSPSTFK RVKVDATRNF PENCGSFVYQ NNGSKDIYPE FRSNSKRVKV NSTRSFPKNC GPCVPEKKKG SDTPCSVDSE IKSCSDVDMN
101: VVESAEPLSV FEPEDDLAAT VVCPKEAGDS SHQNTSCQPA NGNQQHEVLV NLVLQNPSID SGNTCDWFIK SEPIENEPEL PAIVSQENLI QGRDEPSKET
201: SKRVHYGEVP YDEYRSRVDN DEICILSCSE SNSLKSGLKT LSAGKKGGKG EIVQEEAVSS PEPLHKCNVI FEDESVVMKN QIVLGVSQED LRNSVVMCNV
301: SGNGLLTEHE HIQKVKEVRE TLKLFDDEYT KLLLEDRAEK HEGGPKRSIH IEAAMALKKQ KKWVNCEWTF GHVPGVQIGD QFRFRAELVM IGLHHQFIKG
401: INYVTIGRKD VASSIVDSGR YDNEAISSET FIYVGQGGNP KVSVNARMED QKLEGGNLAL KNSMELGYPV RVICGRQRVN GEKSDTRYIY DGLYTVTKCW
501: EERAPTGKYI FKFELKRNLG QPKLARELVS RPAKLVKVNQ FCVNKAKKSI LQSEFVVDYD VSQGKEKIPI LVVNAIDDER PSPFTYITSM QYPDWYYISR
601: PQGCNCTSGC LDSEQCSCAS RNGGEIPFNT RGSIVRAQPL VYECGPSCKC PPSCKNRVSQ HGPRYHLEVF KTESRGWGLR SRDYVTRGRF ICEYVGELLD
701: EKEAENRIGH DEYLFDIGNY DEEIPKRNVA RNNNLKVESN SLTRKDEDGF TLDALRYGNV GRFINHSCSP NLYAQNVMYY HGDKKVPHIM FFASESIAPL
801: EELTYHYNYD VDQVSDKNVR GENVLKNYSS SNFALFIRG

Best Arabidopsis Sequence Match ( AT2G35160.5 )
(BLAST)

001: MGRRKSKRFK VAAESEFSPD FGSITRQLRS RRMQKEFTVE TYETRNVSDV CVLSSQADVE LIPGEIVAER DSFKSVDCND MSVGLTEGAE SLGVNMQEPM
101: KDRNMPENTS EQNMVEVHPP SISLPEEDMM GSVCRKSITG TKELHGRTIS VGRDLSPNMG SKFSKNGKTA KRSISVEEEN LVLEKSDSGD HLGPSPEVLE
201: LEKSEVWIIT DKGVVMPSPV KPSEKRNGDY GEGSMRKNSE RVALDKKRLA SKFRLSNGGL PSCSSSGDSA RYKVKETMRL FHETCKKIMQ EEEARPRKRD
301: GGNFKVVCEA SKILKSKGKN LYSGTQIIGT VPGVEVGDEF QYRMELNLLG IHRPSQSGID YMKDDGGELV ATSIVSSGGY NDVLDNSDVL IYTGQGGNVG
401: KKKNNEPPKD QQLVTGNLAL KNSINKKNPV RVIRGIKNTT LQSSVVAKNY VYDGLYLVEE YWEETGSHGK LVFKFKLRRI PGQPELPWKE VAKSKKSEFR
501: DGLCNVDITE GKETLPICAV NNLDDEKPPP FIYTAKMIYP DWCRPIPPKS CGCTNGCSKS KNCACIVKNG GKIPYYDGAI VEIKPLVYEC GPHCKCPPSC
601: NMRVSQHGIK IKLEIFKTES RGWGVRSLES IPIGSFICEY AGELLEDKQA ESLTGKDEYL FDLGDEDDPF TINAAQKGNI GRFINHSCSP NLYAQDVLYD
701: HEEIRIPHIM FFALDNIPPL QELSYDYNYK IDQVYDSNGN IKKKFCYCGS AECSGRLY

Arabidopsis Description

SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.