Factsheet for Solyc03g093710.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400054163	Potato	extracellular, nucleus	87.95	87.74
Solyc03g093720.1.1	Tomato	nucleus	28.64	80.0
Solyc03g093700.1.1	Tomato	nucleus	79.47	79.38
Solyc03g093760.1.1	Tomato	nucleus	70.41	74.03
Solyc03g093740.1.1	Tomato	nucleus	23.27	63.52
Solyc03g093770.1.1	Tomato	golgi, plasma membrane	26.73	55.31
VIT_16s0013g00310.t01	Wine grape	nucleus	29.71	53.9
Bra005362.1-P	Field mustard	nucleus	24.82	50.86
VIT_16s0013g00650.t01	Wine grape	nucleus	32.82	47.25
TraesCS3A01G520700.1	Wheat	nucleus	16.23	47.22
KRG90121	Soybean	nucleus	25.06	38.04
CDY31670	Canola	nucleus	31.5	36.82
CDX84255	Canola	nucleus	31.38	36.48
CDY25627	Canola	nucleus	32.46	36.46
CDX89510	Canola	nucleus	32.1	35.49
AT2G22740.1	Thale cress	nucleus	32.94	34.94
AT2G35160.3	Thale cress	nucleus	31.5	33.25
Bra030212.1-P	Field mustard	nucleus	31.38	33.21
TraesCS3B01G590300.1	Wheat	nucleus	24.7	32.96
EES05802	Sorghum	nucleus	27.45	29.22
Solyc02g094520.2.1	Tomato	nucleus	23.51	29.1
Solyc06g060960.1.1	Tomato	nucleus	36.28	28.82
Os04t0544100-01	Rice	nucleus	28.64	28.54
Solyc09g082050.2.1	Tomato	nucleus	21.84	28.28
Solyc08g077940.1.1	Tomato	nucleus	33.41	27.0
Solyc10g077070.1.1	Tomato	nucleus	22.91	26.89
EES12588	Sorghum	nucleus	27.92	26.26
Solyc01g068370.2.1	Tomato	nucleus	10.5	25.81
Solyc09g090810.1.1	Tomato	nucleus	21.36	25.72
Solyc12g096990.1.1	Tomato	nucleus	19.81	24.96
TraesCS2B01G409600.1	Wheat	nucleus	28.16	24.53
TraesCS2D01G389100.1	Wheat	nucleus	27.92	24.38
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	27.92	23.21
Solyc09g090630.1.1	Tomato	nucleus	12.89	13.6
Solyc06g083760.2.1	Tomato	nucleus	12.77	12.43
Solyc09g072890.1.1	Tomato	nucleus	11.81	12.0
Solyc02g089970.2.1	Tomato	nucleus	15.16	8.42

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024
GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105
InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	UniProt:K4BIP7	PFAM:PF00856
PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015
PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF458	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom
InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG
SUPFAM:SSF82199	SUPFAM:SSF88697	EnsemblPlantsGene:Solyc03g093710.1	EnsemblPlants:Solyc03g093710.1.1	UniParc:UPI00027692D2	SEG:seg

Description

No Description!

Coordinates

chr3:-:55346444..55348960

Molecular Weight (calculated)

94352.9 Da

IEP (calculated)

6.660

GRAVY (calculated)

-0.716

Length

838 amino acids

Sequence
(BLAST)

001: MLGKKKLHQM VDTKSPSTVK RLKVDATRNF PENCGPFVGE NDGTGDKYPE FPSATKPVKV ETTRNYPENC GPCVLQKKNG CDTQSSANVD IGSCSEVEMD
101: VVELGDPLSV FVPKDMQFDL DATGVCEEEG GDSSHLNTSC QPVTNGNQVL TTKEVNLMYD DSTQLNEVLV NQILQKTSTD TGNTCDWFIN GDPIENGPEL
201: PSEETNKGFQ YKEVADDEST SRVDNSSCSQ SNSQNSGLKT PSASKKGGKG EIVQEEAVKC PEPLHKCKVI FEHESVVRKK QIDIGVSPED LRNSDVFCGA
301: SGNGLLMEHE NIQKVKEVKE TLKLFDDEYT KLLQEDKAKK HEGRSKRRIH IEAAMNLKKQ KKWVNCEWTF GHVPGVQIGD QFRFRAELVA IGLHHQFIKG
401: INYVTIGRKN VASSVVDSSR YDNEAISSET FIYVGQGGNP MVSLNGRVED QKLEGGNLAL KNSMDLGYPV RVICGRQRLN GEKSDTRYIY DGLYTVTKCW
501: EERASTEKYI FKFELKRNLG QPKLNRELVS RPAKLVKVTH SCVNKSTKSV MQSEFVVDYD VSQGKEKIPI RVVNAIDDER LPPFTYITNM QYPDWYYISR
601: PQGCNCTSGC SDSEQCSCAS RNGGEIPFNT RGSIVRAQPL VYECGPSCKC PPSCKNRVSQ HGPRYHLEVF KTESRGWGLR SRDHVSSGSF ICEYVGELLD
701: EKEAENRIDN DEYLFDIGNY DEEIPKRNVA RNNNLKVDSN SSMRKDEDGF TLDAIRYGNV GRFINHSCSP NLYAQNVMYY HGDKKVPHIM FFASESIAPL
801: KELTYHYNYH IDHVYDKNGD VKRKNCRCGS RKCEGRMY

Best Arabidopsis Sequence Match ( AT2G22740.2 )
(BLAST)

001: MEMGVMENLM VHTEISKVKS QSNGEVEKRG VSVLENGGVC KLDRMSGLKF KRRKVFAVRD FPPGCGSRAM EVKIACENGN VVEDVKVVES LVKEEESLGQ
101: RDASENVSDI RMAEPVEVQP LRICLPGGDV VRDLSVTAGD ECSNSEQIVA GSGVSSSSGT ENIVRDIVVY ADESSLGMDN LDQTQPLEIE MSDVAVAKPR
201: LVAGRKKAKK GIACHSSLKV VSREFGEGSR KKKSKKNLYW RDRESLDSPE QLRILGVGTS SGSSSGDSSR NKVKETLRLF HGVCRKILQE DEAKPEDQRR
301: KGKGLRIDFE ASTILKRNGK FLNSGVHILG EVPGVEVGDE FQYRMELNIL GIHKPSQAGI DYMKYGKAKV ATSIVASGGY DDHLDNSDVL TYTGQGGNVM
401: QVKKKGEELK EPEDQKLITG NLALATSIEK QTPVRVIRGK HKSTHDKSKG GNYVYDGLYL VEKYWQQVGS HGMNVFKFQL RRIPGQPELS WVEVKKSKSK
501: YREGLCKLDI SEGKEQSPIS AVNEIDDEKP PLFTYTVKLI YPDWCRPVPP KSCCCTTRCT EAEARVCACV EKNGGEIPYN FDGAIVGAKP TIYECGPLCK
601: CPSSCYLRVT QHGIKLPLEI FKTKSRGWGV RCLKSIPIGS FICEYVGELL EDSEAERRIG NDEYLFDIGN RYDNSLAQGM SELMLGTQAG RSMAEGDESS
701: GFTIDAASKG NVGRFINHSC SPNLYAQNVL YDHEDSRIPH VMFFAQDNIP PLQELCYDYN YALDQVRDSK GNIKQKPCFC GAAVCRRRLY

Arabidopsis Description

SUVH6Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.