Factsheet for Solyc03g093720.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400054167	Potato	nucleus	87.33	54.36
Solyc03g093760.1.1	Tomato	nucleus	89.33	33.63
Bra005362.1-P	Field mustard	nucleus	41.67	30.56
Solyc03g093710.1.1	Tomato	nucleus	80.0	28.64
Solyc03g093700.1.1	Tomato	nucleus	79.0	28.25
VIT_16s0013g00310.t01	Wine grape	nucleus	43.33	28.14
TraesCS3A01G520700.1	Wheat	nucleus	24.67	25.69
Solyc03g093740.1.1	Tomato	nucleus	25.33	24.76
VIT_16s0013g00650.t01	Wine grape	nucleus	45.33	23.37
KRG90121	Soybean	nucleus	37.67	20.47
Solyc03g093770.1.1	Tomato	golgi, plasma membrane	27.0	20.0
CDY31670	Canola	nucleus	41.67	17.43
CDX84255	Canola	nucleus	41.0	17.06
TraesCS3B01G590300.1	Wheat	nucleus	35.0	16.72
CDX89510	Canola	nucleus	41.0	16.23
CDY25627	Canola	nucleus	40.33	16.22
AT2G22740.1	Thale cress	nucleus	42.33	16.08
Bra030212.1-P	Field mustard	nucleus	42.33	16.04
Solyc02g094520.2.1	Tomato	nucleus	36.0	15.95
AT2G35160.3	Thale cress	nucleus	41.67	15.74
Solyc01g068370.2.1	Tomato	nucleus	17.33	15.25
Solyc09g082050.2.1	Tomato	nucleus	31.33	14.53
EES05802	Sorghum	nucleus	36.67	13.98
Solyc10g077070.1.1	Tomato	nucleus	32.67	13.73
Os04t0544100-01	Rice	nucleus	37.0	13.2
Solyc12g096990.1.1	Tomato	nucleus	28.67	12.93
Solyc09g090810.1.1	Tomato	nucleus	29.33	12.64
EES12588	Sorghum	nucleus	37.0	12.46
Solyc06g060960.1.1	Tomato	nucleus	43.67	12.42
Solyc08g077940.1.1	Tomato	nucleus	42.0	12.15
TraesCS2B01G409600.1	Wheat	nucleus	35.0	10.91
TraesCS2D01G389100.1	Wheat	nucleus	34.67	10.83
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	34.67	10.32
Solyc09g090630.1.1	Tomato	nucleus	19.33	7.3
Solyc09g072890.1.1	Tomato	nucleus	20.0	7.27
Solyc06g083760.2.1	Tomato	nucleus	20.67	7.2
Solyc02g089970.2.1	Tomato	nucleus	22.0	4.37

Protein Annotations

KEGG:00310+2.1.1.43	Gene3D:2.170.270.10	Gene3D:2.30.280.10	MapMan:50.2.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:IPR001214	InterPro:IPR003105
InterPro:IPR007728	InterPro:IPR036987	UniProt:K4BIP8	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033
PFscan:PS50280	PFscan:PS51015	PANTHER:PTHR22884	PANTHER:PTHR22884:SF458	InterPro:PUA-like_sf	InterPro:Pre-SET_dom
InterPro:SET_dom	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199
SUPFAM:SSF88697	EnsemblPlantsGene:Solyc03g093720.1	EnsemblPlants:Solyc03g093720.1.1	UniParc:UPI00027692D3	SEG:seg	:

Description

No Description!

Coordinates

chr3:-:55372862..55374076

Molecular Weight (calculated)

34363.5 Da

IEP (calculated)

8.443

GRAVY (calculated)

-0.677

Length

300 amino acids

Sequence
(BLAST)

001: MGQGGNPKVF VNARVEDQNL KGGNIALKNS MDMGCPVRVI CGRKRVNGEK IDIRYIYNGL YTVTKYWEEI APTGKYVFKF ELKRNPGQQK LNREIVSRPT
101: SLGKVDHFHV NKATKSIMES EFVVDYDVSQ RKEKIPIRVV NAIDDERLLS FTYITNIQYP DWYYISTPQG CNCTSGCSNS GQCSCSSRNG VNQHCPRYHL
201: EVFKTESRGW GLRSRDRVSS GSFICEYVGE LLDEKEAESF IYNDEYLFDV GNYDEKIPKR NSMRDNNLKA EADSLRRKDE DGFALTAVRY GNVGRFINHS

Best Arabidopsis Sequence Match ( AT2G35160.1 )
(BLAST)

001: MVHSESSILS SLRGGDGGGI PCSKDELAIN GSYTDPMGRR KSKRFKVAAE SEFSPDFGSI TRQLRSRRMQ KEFTVETYET RNVSDVCVLS SQADVELIPG
101: EIVAERDSFK SVDCNDMSVG LTEGAESLGV NMQEPMKDRN MPENTSEQNM VEVHPPSISL PEEDMMGSVC RKSITGTKEL HGRTISVGRD LSPNMGSKFS
201: KNGKTAKRSI SVEEENLVLE KSDSGDHLGP SPEVLELEKS EVWIITDKGV VMPSPVKPSE KRNGDYGEGS MRKNSERVAL DKKRLASKFR LSNGGLPSCS
301: SSGDSARYKV KETMRLFHET CKKIMQEEEA RPRKRDGGNF KVVCEASKIL KSKGKNLYSG TQIIGTVPGV EVGDEFQYRM ELNLLGIHRP SQSGIDYMKD
401: DGGELVATSI VSSGGYNDVL DNSDVLIYTG QGGNVGKKKN NEPPKDQQLV TGNLALKNSI NKKNPVRVIR GIKNTTLQSS VVAKNYVYDG LYLVEEYWEE
501: TGSHGKLVFK FKLRRIPGQP ELPWKEVAKS KKSEFRDGLC NVDITEGKET LPICAVNNLD DEKPPPFIYT AKMIYPDWCR PIPPKSCGCT NGCSKSKNCA
601: CIVKNGGKIP YYDGAIVEIK PLVYECGPHC KCPPSCNMRV SQHGIKIKLE IFKTESRGWG VRSLESIPIG SFICEYAGEL LEDKQAESLT GKDEYLFDLG
701: DEDDPFTINA AQKGNIGRFI NHSCSPNLYA QDVLYDHEEI RIPHIMFFAL DNIPPLQELS YDYNYKIDQV YDSNGNIKKK FCYCGSAECS GRLY

Arabidopsis Description

SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.