Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
- plasma membrane 5
- extracellular 4
- endoplasmic reticulum 4
- golgi 5
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400080391 | Potato | nucleus | 69.63 | 62.81 |
| Solyc03g093740.1.1 | Tomato | nucleus | 27.41 | 36.16 |
| Solyc03g093760.1.1 | Tomato | nucleus | 54.57 | 27.73 |
| Solyc03g093700.1.1 | Tomato | nucleus | 56.54 | 27.29 |
| Solyc03g093720.1.1 | Tomato | nucleus | 20.0 | 27.0 |
| VIT_16s0013g00310.t01 | Wine grape | nucleus | 30.62 | 26.84 |
| Solyc03g093710.1.1 | Tomato | nucleus | 55.31 | 26.73 |
| VIT_16s0013g00650.t01 | Wine grape | nucleus | 32.84 | 22.85 |
| KRG90121 | Soybean | nucleus | 27.9 | 20.47 |
| Bra005362.1-P | Field mustard | nucleus | 19.75 | 19.56 |
| CDY31670 | Canola | nucleus | 30.37 | 17.15 |
| CDX84255 | Canola | nucleus | 29.38 | 16.5 |
| CDY25627 | Canola | nucleus | 30.12 | 16.35 |
| CDX89510 | Canola | nucleus | 30.37 | 16.23 |
| AT2G22740.1 | Thale cress | nucleus | 31.36 | 16.08 |
| Bra030212.1-P | Field mustard | nucleus | 31.11 | 15.91 |
| TraesCS3B01G590300.1 | Wheat | nucleus | 24.44 | 15.76 |
| AT2G35160.3 | Thale cress | nucleus | 30.86 | 15.74 |
| Solyc09g082050.2.1 | Tomato | nucleus | 24.94 | 15.61 |
| Solyc02g094520.2.1 | Tomato | nucleus | 25.68 | 15.36 |
| Solyc10g077070.1.1 | Tomato | nucleus | 26.17 | 14.85 |
| Solyc12g096990.1.1 | Tomato | nucleus | 23.7 | 14.44 |
| Solyc09g090810.1.1 | Tomato | nucleus | 24.69 | 14.37 |
| Solyc06g060960.1.1 | Tomato | nucleus | 34.32 | 13.18 |
| Solyc08g077940.1.1 | Tomato | nucleus | 33.09 | 12.92 |
| EES05802 | Sorghum | nucleus | 24.94 | 12.83 |
| Os04t0544100-01 | Rice | nucleus | 26.17 | 12.6 |
| EES12588 | Sorghum | nucleus | 26.67 | 12.12 |
| TraesCS2B01G409600.1 | Wheat | nucleus | 25.19 | 10.6 |
| TraesCS2D01G389100.1 | Wheat | nucleus | 24.69 | 10.42 |
| TraesCS2A01G389600.1 | Wheat | mitochondrion, nucleus | 24.69 | 9.92 |
| TraesCS3A01G520700.1 | Wheat | nucleus | 6.91 | 9.72 |
| Solyc01g068370.2.1 | Tomato | nucleus | 5.43 | 6.45 |
| Solyc09g072890.1.1 | Tomato | nucleus | 9.38 | 4.61 |
| Solyc06g083760.2.1 | Tomato | nucleus | 9.14 | 4.3 |
| Solyc09g090630.1.1 | Tomato | nucleus | 7.65 | 3.9 |
| Solyc02g089970.2.1 | Tomato | nucleus | 12.1 | 3.25 |
Protein Annotations
| Gene3D:2.170.270.10 | Gene3D:2.30.280.10 | MapMan:35.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | InterPro:IPR003105 | InterPro:IPR036987 | UniProt:K4BIQ3 | PFAM:PF02182 | PFscan:PS51015 |
| PANTHER:PTHR22884 | PANTHER:PTHR22884:SF458 | InterPro:PUA-like_sf | SMART:SM00466 | InterPro:SRA-YDG_sf | InterPro:SRA_YDG |
| SUPFAM:SSF82199 | SUPFAM:SSF88697 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc03g093770.1 | EnsemblPlants:Solyc03g093770.1.1 | TMHMM:TMhelix |
| UniParc:UPI00027692D8 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:55445453..55447059
Molecular Weight (calculated)
47123.7 Da
IEP (calculated)
10.350
GRAVY (calculated)
-0.635
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLTQTILLF FSPNLSITSL LLCCQMSFVP VETSTSKKLQ KKRHHQMINT RSLSVLKRLR VDSINNFQEN YRPSIRQNNV QQHDVLINHK LNVPKISSAY
101: TRCEWFLNGG RSINRSKLPT ISENEHIQKR KQVRETLKLF ADEYTKFFQE KKVEKQGKHS KRIININAAM ILRNQEKWVN SEWAFGHVPG VEIGDRFRFR
201: VELAMVGLHH KIFRGINYVN IDNKKVATSI VDSGRYENET ISSEKFIYVG QGGNPRVSVN ARVEDQKLER DNLALKNSMD LGYSVRVIYG RPRVDSEKTE
301: RKYIYYGLYT VTKCWQERGP TGKYVFKFEL QRNPGQPKLT QLVNFSYASK NGDEFQFNPR SSILKADPLV HECGPYCKCP QSCKNRVSQH SLQYDFMVFK
401: TKSKG
101: TRCEWFLNGG RSINRSKLPT ISENEHIQKR KQVRETLKLF ADEYTKFFQE KKVEKQGKHS KRIININAAM ILRNQEKWVN SEWAFGHVPG VEIGDRFRFR
201: VELAMVGLHH KIFRGINYVN IDNKKVATSI VDSGRYENET ISSEKFIYVG QGGNPRVSVN ARVEDQKLER DNLALKNSMD LGYSVRVIYG RPRVDSEKTE
301: RKYIYYGLYT VTKCWQERGP TGKYVFKFEL QRNPGQPKLT QLVNFSYASK NGDEFQFNPR SSILKADPLV HECGPYCKCP QSCKNRVSQH SLQYDFMVFK
401: TKSKG
001: MSQKRSLVFA IRDFPPGCGT HIDVSSSLNH PAEKAFKHPR TGDVSGENLS FAEAKPEGTC LKRESADQDH IFAAPEHNAK REPAGQDHVV AATTVAYATS
101: SHRQKVEIGN SDCDPTPREK VLEVLSLFKQ VYNQLDRDKK ARRGGDFLDA TSRIDLKTLT VLEKMGKQVN TEKRIGSVPG INIGDVFQYK TELRVVGLHS
201: KPMCGIDYIK LGDDRITTSI VASEGYGYND TYNSGVMVYT GEGGNVINKQ KKTEDQKLVK GNLALATSMR QKSQVRVIRG EERLDRKGKR YVYDGLYMVE
301: EYWVERDVRG KSVYKFKLCR IPGQLPLT
101: SHRQKVEIGN SDCDPTPREK VLEVLSLFKQ VYNQLDRDKK ARRGGDFLDA TSRIDLKTLT VLEKMGKQVN TEKRIGSVPG INIGDVFQYK TELRVVGLHS
201: KPMCGIDYIK LGDDRITTSI VASEGYGYND TYNSGVMVYT GEGGNVINKQ KKTEDQKLVK GNLALATSMR QKSQVRVIRG EERLDRKGKR YVYDGLYMVE
301: EYWVERDVRG KSVYKFKLCR IPGQLPLT
Arabidopsis Description
YDG domain-containing protein At5g47150 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHI0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.