Factsheet for Solyc05g047530.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400035590	Potato	cytosol, plasma membrane	82.2	97.75
KRH35971	Soybean	plastid	71.02	81.34
VIT_11s0078g00290.t01	Wine grape	plasma membrane	76.52	75.66
KRG90791	Soybean	plasma membrane, vacuole	76.52	74.95
VIT_11s0065g00350.t01	Wine grape	plasma membrane	75.19	74.62
GSMUA_AchrUn_...	Banana	cytosol	35.04	67.52
GSMUA_Achr9P14110_001	Banana	plasma membrane	63.83	66.87
Os02t0467600-01	Rice	plasma membrane	66.1	65.48
EES05020	Sorghum	plasma membrane	65.72	65.47
TraesCS7B01G299500.1	Wheat	endoplasmic reticulum, golgi, vacuole	65.15	64.66
TraesCS7D01G393100.1	Wheat	plasma membrane	65.34	64.61
TraesCS7A01G398900.3	Wheat	golgi, plasma membrane	64.58	64.22
TraesCS2B01G182500.1	Wheat	plasma membrane	64.58	64.1
Zm00001d016471_P001	Maize	endoplasmic reticulum	64.39	64.03
TraesCS2D01G162800.1	Wheat	plasma membrane	64.39	63.79
HORVU7Hr1G093630.1	Barley	mitochondrion, plastid	65.34	62.5
GSMUA_Achr3P05430_001	Banana	cytosol	28.98	60.96
Os02t0467000-00	Rice	cytosol, peroxisome, plastid	65.34	57.4

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016705	GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	UniProt:K4C0Y7	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PFscan:PS51257	PANTHER:PTHR24298	PANTHER:PTHR24298:SF149	SUPFAM:SSF48264	EnsemblPlantsGene:Solyc05g047530.2
EnsemblPlants:Solyc05g047530.2.1	TMHMM:TMhelix	UniParc:UPI0002766C9A	SEG:seg	:	:

Description

No Description!

Coordinates

chr5:-:59013092..59015065

Molecular Weight (calculated)

60482.8 Da

IEP (calculated)

8.530

GRAVY (calculated)

-0.085

Length

528 amino acids

Sequence
(BLAST)

001: MAKFINKMTI YSILFTIIFI SCSKLLSFPL NNISLVVLPI LPLIFYFLYA NNSQITLPPG PRPVPIFGNW LQVGNDLNHR LLATMAQTYG SIFLLKLGSK
101: NLVVISNPEL ANQVLHTQGV EFGSRPRNVV FDIFTGNGQD MVFTIYGDHW RKMRRIMTVP FFTNKVVHQY SDMWENEMDL VVDDLKKLKH EGIVIRRRLQ
201: LMLYNIMYRM MFDDKFESLD DPLFIEATKF NSERSRLAQS FDYNYGDFIP LLRPFLRGYL NKCKDLQTRR LAFFNNYFVE KRRKLMAENG EKHKISCAID
301: HIIDAQMKGE ISEENVLYIV ENINVAAIET TLWSMEWAIG ELVNHPNVQQ KIRDEISTVL KGKSVTESNL HELPYLQATI NETLRLHTPI PLLVPHMNLD
401: EAKLGDYTIP KETKVVVNAW WLANNPAWWK NPNEFRPERF LEEDGGTEAA VAGGKVDFRY LPFGMGRRSC PGIILALPIL GLVIAKLVSN FEMQAPSGEG
501: KVDTSEKGGQ FSLHIAKHST VVFKPVAA

Best Arabidopsis Sequence Match ( AT2G30490.1 )
(BLAST)

001: MDLLLLEKSL IAVFVAVILA TVISKLRGKK LKLPPGPIPI PIFGNWLQVG DDLNHRNLVD YAKKFGDLFL LRMGQRNLVV VSSPDLTKEV LLTQGVEFGS
101: RTRNVVFDIF TGKGQDMVFT VYGEHWRKMR RIMTVPFFTN KVVQQNREGW EFEAASVVED VKKNPDSATK GIVLRKRLQL MMYNNMFRIM FDRRFESEDD
201: PLFLRLKALN GERSRLAQSF EYNYGDFIPI LRPFLRGYLK ICQDVKDRRI ALFKKYFVDE RKQIASSKPT GSEGLKCAID HILEAEQKGE INEDNVLYIV
301: ENINVAAIET TLWSIEWGIA ELVNHPEIQS KLRNELDTVL GPGVQVTEPD LHKLPYLQAV VKETLRLRMA IPLLVPHMNL HDAKLAGYDI PAESKILVNA
401: WWLANNPNSW KKPEEFRPER FFEEESHVEA NGNDFRYVPF GVGRRSCPGI ILALPILGIT IGRMVQNFEL LPPPGQSKVD TSEKGGQFSL HILNHSIIVM
501: KPRNC

Arabidopsis Description

CYP73A5Cinnamate-4-hydroxylase [Source:UniProtKB/TrEMBL;Acc:B1GV49]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.