Factsheet for Solyc06g050300.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 3
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074774	Potato	cytosol	92.29	92.29
PGSC0003DMT400074768	Potato	cytosol	92.29	91.87
Solyc06g050270.1.1	Tomato	cytosol	88.44	90.28
Solyc06g050290.1.1	Tomato	cytosol	82.54	89.43
Solyc06g050280.1.1	Tomato	cytosol, mitochondrion	86.62	88.43
Solyc05g052270.1.1	Tomato	cytosol	71.43	71.59
GSMUA_Achr8P21320_001	Banana	cytosol	52.15	62.33
VIT_13s0067g02480.t01	Wine grape	cytosol	64.85	61.64
GSMUA_Achr2P18880_001	Banana	cytosol	51.02	61.14
OQU77747	Sorghum	cytosol	58.05	59.4
OQU77749	Sorghum	cytosol	57.82	59.16
TraesCS2A01G107000.1	Wheat	cytosol	47.62	58.99
KXG36943	Sorghum	cytosol	58.5	57.46
KRG97651	Soybean	cytosol	58.5	57.46
Os05t0332300-01	Rice	cytosol	59.18	57.11
Os07t0678600-01	Rice	cytosol	57.37	57.11
KRH31221	Soybean	cytosol	58.28	56.86
Zm00001d022450_P001	Maize	cytosol	57.82	56.54
Zm00001d038048_P001	Maize	cytosol	58.5	56.21
HORVU2Hr1G018260.1	Barley	cytosol	56.46	55.33
TraesCS4D01G170700.1	Wheat	cytosol	54.88	55.25
TraesCS2B01G123900.1	Wheat	cytosol	56.46	55.09
TraesCS2D01G106800.1	Wheat	cytosol	56.92	55.04
TraesCS4A01G136500.2	Wheat	cytosol	54.65	54.65
EER94892	Sorghum	cytosol	54.2	54.57
Os03t0339900-01	Rice	cytosol	55.56	54.32
Solyc09g042660.2.1	Tomato	cytosol	54.42	54.18
Solyc10g085450.1.1	Tomato	cytosol	36.96	53.8
Zm00001d007167_P001	Maize	cytosol	56.01	53.35
Solyc02g072540.2.1	Tomato	cytosol	55.56	53.26
Zm00001d029075_P001	Maize	cytosol	52.83	53.2
GSMUA_Achr6P08690_001	Banana	cytosol	49.43	52.91
Solyc06g007430.1.1	Tomato	cytosol	56.01	51.67
Solyc03g006110.2.1	Tomato	cytosol	53.06	50.32
Solyc07g005440.1.1	Tomato	cytosol	48.07	50.0
Solyc12g010130.1.1	Tomato	cytosol	47.85	48.84
Solyc06g068450.1.1	Tomato	cytosol	47.17	47.38
Solyc08g067310.1.1	Tomato	cytosol	46.94	45.7
Solyc02g072530.1.1	Tomato	cytosol	48.3	44.56
Solyc06g007440.2.1	Tomato	cytosol	44.67	44.27
GSMUA_Achr6P15810_001	Banana	cytosol	53.97	44.24
Solyc09g018280.1.1	Tomato	cytosol	43.99	43.79
Solyc06g082440.1.1	Tomato	cytosol	39.91	42.0

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	Gene3D:3.30.310.80	InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0018105	GO:GO:0018107	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719
UniProt:K4C5H5	InterPro:Kinase-like_dom_sf	InterPro:NAF_dom	PFAM:PF00069	PFAM:PF03822	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR43895	PANTHER:PTHR43895:SF15	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc06g050300.1	EnsemblPlants:Solyc06g050300.1.1
TMHMM:TMhelix	UniParc:UPI000276693B	SEG:seg	:	:	:

Description

Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:K4C5H5]

Coordinates

chr6:-:32876608..32877933

Molecular Weight (calculated)

49767.4 Da

IEP (calculated)

8.893

GRAVY (calculated)

-0.165

Length

441 amino acids

Sequence
(BLAST)

001: MVKNGNVVMQ KYELGRLLGQ GNFGKVYYGR DLESGQTVAI KVIDKEKVQK AELTEQTKRE ISVMAMVKHR HVVQLYEVMA TKSKIYFVIE HAKGGELFNK
101: LTKGRLTEDV ARKLFQQLIN AVEFCHSRGV YHRDLKPENL LLDENGNLKV SDFGLSALAE SKRQDGLLHT TCGTPAYVAP EVIGRKGYEG AKADIWSCGV
201: ILFVLLAGYL PFYDLNLMNL YRKICRAEYK CPNWFPLEVR KLLSRIFDPN PRKRISIAKI KESSWFKKGL ESRHVGTKQV VNQNVIADGN AVSSSNSENS
301: TSSSDTKLEL IKPAIFSAFN ILCQFNLSGL FINNDQKEEL LFTSVEPVPV IISKLVEVGR SLNLEVKKKE GGFLILEGLN ESRYETLCIG VQIFEISVSN
401: YFIELSRSSG DVIDYQNMLT QTIRPALEEI VLAWLGVQSY Q

Best Arabidopsis Sequence Match ( AT5G01810.1 )
(BLAST)

001: MEKKGSVLML RYEVGKFLGQ GTFAKVYHAR HLKTGDSVAI KVIDKERILK VGMTEQIKRE ISAMRLLRHP NIVELHEVMA TKSKIYFVME HVKGGELFNK
101: VSTGKLREDV ARKYFQQLVR AVDFCHSRGV CHRDLKPENL LLDEHGNLKI SDFGLSALSD SRRQDGLLHT TCGTPAYVAP EVISRNGYDG FKADVWSCGV
201: ILFVLLAGYL PFRDSNLMEL YKKIGKAEVK FPNWLAPGAK RLLKRILDPN PNTRVSTEKI MKSSWFRKGL QEEVKESVEE ETEVDAEAEG NASAEKEKKR
301: CINLNAFEII SLSTGFDLSG LFEKGEEKEE MRFTSNREAS EITEKLVEIG KDLKMKVRKK EHEWRVKMSA EATVVEAEVF EIAPSYHMVV LKKSGGDTAE
401: YKRVMKESIR PALIDFVLAW H

Arabidopsis Description

CIPK15CBL-interacting serine/threonine-protein kinase 15 [Source:UniProtKB/Swiss-Prot;Acc:P92937]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.