Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400068351 | Potato | nucleus | 93.74 | 92.95 |
| Solyc08g077940.1.1 | Tomato | nucleus | 57.63 | 58.63 |
| TraesCS3A01G520700.1 | Wheat | nucleus | 14.41 | 52.78 |
| Solyc03g093740.1.1 | Tomato | nucleus | 12.89 | 44.3 |
| Solyc03g093720.1.1 | Tomato | nucleus | 12.42 | 43.67 |
| TraesCS3B01G590300.1 | Wheat | nucleus | 23.41 | 39.33 |
| Solyc03g093710.1.1 | Tomato | nucleus | 28.82 | 36.28 |
| Solyc03g093760.1.1 | Tomato | nucleus | 27.01 | 35.76 |
| Solyc03g093700.1.1 | Tomato | nucleus | 27.96 | 35.16 |
| Solyc03g093770.1.1 | Tomato | golgi, plasma membrane | 13.18 | 34.32 |
| Os04t0544100-01 | Rice | nucleus | 26.35 | 33.06 |
| Solyc09g082050.2.1 | Tomato | nucleus | 20.0 | 32.61 |
| EES05802 | Sorghum | nucleus | 23.98 | 32.15 |
| EES12588 | Sorghum | nucleus | 26.45 | 31.31 |
| Solyc02g094520.2.1 | Tomato | nucleus | 19.72 | 30.72 |
| Solyc10g077070.1.1 | Tomato | nucleus | 20.0 | 29.55 |
| Solyc12g096990.1.1 | Tomato | nucleus | 18.2 | 28.87 |
| Solyc09g090810.1.1 | Tomato | nucleus | 18.86 | 28.59 |
| TraesCS2B01G409600.1 | Wheat | nucleus | 26.07 | 28.59 |
| TraesCS2D01G389100.1 | Wheat | nucleus | 25.31 | 27.81 |
| TraesCS2A01G389600.1 | Wheat | mitochondrion, nucleus | 25.59 | 26.79 |
| Solyc01g068370.2.1 | Tomato | nucleus | 8.15 | 25.22 |
| Solyc09g090630.1.1 | Tomato | nucleus | 11.09 | 14.74 |
| Solyc06g083760.2.1 | Tomato | nucleus | 11.28 | 13.82 |
| Solyc09g072890.1.1 | Tomato | nucleus | 10.43 | 13.33 |
| Solyc02g089970.2.1 | Tomato | nucleus | 13.74 | 9.61 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.7 | Gene3D:2.170.270.10 | Gene3D:2.30.280.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005694 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008270 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016571 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 |
| GO:GO:0032259 | GO:GO:0034968 | InterPro:Hist-Lys_N-MeTrfase_plant | InterPro:IPR001214 | InterPro:IPR003105 | InterPro:IPR003616 |
| InterPro:IPR007728 | InterPro:IPR025794 | InterPro:IPR036987 | UniProt:K4C6S6 | PFAM:PF00856 | PFAM:PF02182 |
| PFAM:PF05033 | PFscan:PS50280 | PFscan:PS50867 | PFscan:PS50868 | PFscan:PS51015 | PFscan:PS51575 |
| PANTHER:PTHR22884 | PANTHER:PTHR22884:SF458 | InterPro:PUA-like_sf | InterPro:Post-SET_dom | InterPro:Pre-SET_dom | InterPro:SET_dom |
| SMART:SM00317 | SMART:SM00466 | SMART:SM00468 | InterPro:SRA-YDG_sf | InterPro:SRA_YDG | SUPFAM:SSF82199 |
| SUPFAM:SSF88697 | EnsemblPlantsGene:Solyc06g060960.1 | EnsemblPlants:Solyc06g060960.1.1 | UniParc:UPI000276656B | SEG:seg | : |
Description
No Description!
Coordinates
chr6:+:38944284..38947451
Molecular Weight (calculated)
115794.0 Da
IEP (calculated)
6.830
GRAVY (calculated)
-0.567
Length
1055 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASVSKDGLS NKSVKKRLLE NGCHSSYLGI IPKYKIRKVS AVRDFPPGCG RTSLKVDLNH VQNAEVSTNI EDMTNIILVD GVKETNIEVK SQSVEVVNDL
0101: INLENQENVD RLAGEVMATN MSAIANGVGE KISDEKSTGF ELPKDLKTSE MELSKETEDI QNDTSVKEVD EQGLPLVESI NGGHMTQKLI SVMEHTSTSP
0201: KNKYRKRRVS AVRDFPPFCG TKVPKSTEQN CFGVTEESKD VAGFGKAVTR NEVIETLREV TETGALPEKL IGSEDADSLK DRDVSSPKDR QLEQITMVRT
0301: EEQEGVQCDY DGRSQVERTV VMPEIMTKKG SDAGPVGKET LVYSENEREK LTSASSALGS GNEKQITKGA KPSGARKQGK QKSLDDPVSG NEIVVSQVES
0401: HLTKTAVNAF GSGHEIVKPI VQGLMAKPCC PWRQGEPTSL DCGNQVEKDD FSGRKKAKAV TRKSNPRGKK KSVTLGEATD GLSSALVVFN DKGPGLWATS
0501: NDGACSLNRE AVHEDSPVRR GQCDFDVTLP PFGPNSSSHG DARTKVRETL RLFQGICRKL LQGEESKSKP EEAKSKQGPN RIDLHAAKII KEKGKEVNTG
0601: QHILGEVPGV EVGDEFQYRV ELAIVGVHRL YQAGIDYMKQ GGMLIAISIV SSGVYDDGLE DADVLIYSGQ GGNVVGKSKT PEDQKLERGN LALKNSISVK
0701: NPVRVIRGSK ETKNSDSVDG KGKLVTTYVY DGLYTVENYW TEQGTKGKMV FMFKLVRVPG QPELAWKEVK SSRKSKVRHG VCVHDITDGK ETFAISAVNT
0801: IDGEKPPPFN YIQKIIYPDW FQPSPFKGCD CIGRCSDSKK CSCAVKNGGE IPYNRNGAIV EVKPLVYECG PHCKCPPSCY NRVSQHGIKV PLEIFKTNSR
0901: GWGVRALTSI PSGTFICEYV GELLEDKEAE QRIGSDEYLF DIGQNYSDCS VNSSRQAEVS EVVEEGYTID AAQYGNIGRF INHSCSPNLY AQSVLYDHED
1001: KKMPHIMLFA ADNIPPLAEL SYHYNYSVDQ VHDSKGNIKV KKCFCGSSEC SGRMY
0101: INLENQENVD RLAGEVMATN MSAIANGVGE KISDEKSTGF ELPKDLKTSE MELSKETEDI QNDTSVKEVD EQGLPLVESI NGGHMTQKLI SVMEHTSTSP
0201: KNKYRKRRVS AVRDFPPFCG TKVPKSTEQN CFGVTEESKD VAGFGKAVTR NEVIETLREV TETGALPEKL IGSEDADSLK DRDVSSPKDR QLEQITMVRT
0301: EEQEGVQCDY DGRSQVERTV VMPEIMTKKG SDAGPVGKET LVYSENEREK LTSASSALGS GNEKQITKGA KPSGARKQGK QKSLDDPVSG NEIVVSQVES
0401: HLTKTAVNAF GSGHEIVKPI VQGLMAKPCC PWRQGEPTSL DCGNQVEKDD FSGRKKAKAV TRKSNPRGKK KSVTLGEATD GLSSALVVFN DKGPGLWATS
0501: NDGACSLNRE AVHEDSPVRR GQCDFDVTLP PFGPNSSSHG DARTKVRETL RLFQGICRKL LQGEESKSKP EEAKSKQGPN RIDLHAAKII KEKGKEVNTG
0601: QHILGEVPGV EVGDEFQYRV ELAIVGVHRL YQAGIDYMKQ GGMLIAISIV SSGVYDDGLE DADVLIYSGQ GGNVVGKSKT PEDQKLERGN LALKNSISVK
0701: NPVRVIRGSK ETKNSDSVDG KGKLVTTYVY DGLYTVENYW TEQGTKGKMV FMFKLVRVPG QPELAWKEVK SSRKSKVRHG VCVHDITDGK ETFAISAVNT
0801: IDGEKPPPFN YIQKIIYPDW FQPSPFKGCD CIGRCSDSKK CSCAVKNGGE IPYNRNGAIV EVKPLVYECG PHCKCPPSCY NRVSQHGIKV PLEIFKTNSR
0901: GWGVRALTSI PSGTFICEYV GELLEDKEAE QRIGSDEYLF DIGQNYSDCS VNSSRQAEVS EVVEEGYTID AAQYGNIGRF INHSCSPNLY AQSVLYDHED
1001: KKMPHIMLFA ADNIPPLAEL SYHYNYSVDQ VHDSKGNIKV KKCFCGSSEC SGRMY
001: MGRRKSKRFK VAAESEFSPD FGSITRQLRS RRMQKEFTVE TYETRNVSDV CVLSSQADVE LIPGEIVAER DSFKSVDCND MSVGLTEGAE SLGVNMQEPM
101: KDRNMPENTS EQNMVEVHPP SISLPEEDMM GSVCRKSITG TKELHGRTIS VGRDLSPNMG SKFSKNGKTA KRSISVEEEN LVLEKSDSGD HLGPSPEVLE
201: LEKSEVWIIT DKGVVMPSPV KPSEKRNGDY GEGSMRKNSE RVALDKKRLA SKFRLSNGGL PSCSSSGDSA RYKVKETMRL FHETCKKIMQ EEEARPRKRD
301: GGNFKVVCEA SKILKSKGKN LYSGTQIIGT VPGVEVGDEF QYRMELNLLG IHRPSQSGID YMKDDGGELV ATSIVSSGGY NDVLDNSDVL IYTGQGGNVG
401: KKKNNEPPKD QQLVTGNLAL KNSINKKNPV RVIRGIKNTT LQSSVVAKNY VYDGLYLVEE YWEETGSHGK LVFKFKLRRI PGQPELPWKE VAKSKKSEFR
501: DGLCNVDITE GKETLPICAV NNLDDEKPPP FIYTAKMIYP DWCRPIPPKS CGCTNGCSKS KNCACIVKNG GKIPYYDGAI VEIKPLVYEC GPHCKCPPSC
601: NMRVSQHGIK IKLEIFKTES RGWGVRSLES IPIGSFICEY AGELLEDKQA ESLTGKDEYL FDLGDEDDPF TINAAQKGNI GRFINHSCSP NLYAQDVLYD
701: HEEIRIPHIM FFALDNIPPL QELSYDYNYK IDQVYDSNGN IKKKFCYCGS AECSGRLY
101: KDRNMPENTS EQNMVEVHPP SISLPEEDMM GSVCRKSITG TKELHGRTIS VGRDLSPNMG SKFSKNGKTA KRSISVEEEN LVLEKSDSGD HLGPSPEVLE
201: LEKSEVWIIT DKGVVMPSPV KPSEKRNGDY GEGSMRKNSE RVALDKKRLA SKFRLSNGGL PSCSSSGDSA RYKVKETMRL FHETCKKIMQ EEEARPRKRD
301: GGNFKVVCEA SKILKSKGKN LYSGTQIIGT VPGVEVGDEF QYRMELNLLG IHRPSQSGID YMKDDGGELV ATSIVSSGGY NDVLDNSDVL IYTGQGGNVG
401: KKKNNEPPKD QQLVTGNLAL KNSINKKNPV RVIRGIKNTT LQSSVVAKNY VYDGLYLVEE YWEETGSHGK LVFKFKLRRI PGQPELPWKE VAKSKKSEFR
501: DGLCNVDITE GKETLPICAV NNLDDEKPPP FIYTAKMIYP DWCRPIPPKS CGCTNGCSKS KNCACIVKNG GKIPYYDGAI VEIKPLVYEC GPHCKCPPSC
601: NMRVSQHGIK IKLEIFKTES RGWGVRSLES IPIGSFICEY AGELLEDKQA ESLTGKDEYL FDLGDEDDPF TINAAQKGNI GRFINHSCSP NLYAQDVLYD
701: HEEIRIPHIM FFALDNIPPL QELSYDYNYK IDQVYDSNGN IKKKFCYCGS AECSGRLY
Arabidopsis Description
SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.