Factsheet for Solyc06g083760.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400051920	Potato	nucleus	56.79	96.07
Solyc09g072890.1.1	Tomato	nucleus	60.28	62.91
TraesCSU01G137800.1	Wheat	nucleus	23.34	48.2
GSMUA_Achr1P20340_001	Banana	nucleus	39.14	47.46
CDX92067	Canola	nucleus	25.32	46.19
Zm00001d051126_P004	Maize	nucleus	26.95	45.76
VIT_07s0005g04190.t01	Wine grape	mitochondrion, nucleus	44.83	45.52
AT3G04380.1	Thale cress	nucleus	25.9	45.33
KRG97025	Soybean	nucleus	14.87	45.07
KRG92731	Soybean	nucleus	36.93	44.6
KRH34133	Soybean	nucleus	35.42	44.46
OQU85329	Sorghum	nucleus	33.91	43.07
KRH68776	Soybean	nucleus	33.8	42.98
KRG95723	Soybean	nucleus	36.12	42.96
TraesCS2D01G478100.1	Wheat	nucleus	29.73	42.81
TraesCS2A01G478800.1	Wheat	nucleus	29.73	42.67
Bra036004.1-P	Field mustard	nucleus	30.78	42.4
TraesCS2B01G503200.1	Wheat	nucleus	29.5	42.26
Os02t0621100-01	Rice	nucleus	36.0	41.84
CDY14903	Canola	nucleus	30.66	41.25
KRH32246	Soybean	nucleus	39.02	40.93
TraesCS2D01G378500.3	Wheat	nucleus	32.17	40.86
KRH19618	Soybean	nucleus	38.68	40.51
TraesCS2A01G382000.5	Wheat	nucleus	31.82	40.47
TraesCS6A01G226600.1	Wheat	nucleus	31.94	40.38
TraesCS6B01G255000.1	Wheat	nucleus	31.94	40.38
TraesCS6D01G208400.1	Wheat	nucleus	31.94	40.38
TraesCS2B01G399300.4	Wheat	nucleus	31.71	40.33
CDX94744	Canola	nucleus	31.59	39.71
CDY49341	Canola	nucleus	25.55	39.5
EES15150	Sorghum	nucleus	33.8	39.38
HORVU7Hr1G064110.6	Barley	nucleus, plastid	27.64	39.14
HORVU2Hr1G107560.8	Barley	mitochondrion, nucleus	32.87	38.93
AT5G43990.9	Thale cress	nucleus	33.45	38.92
Solyc09g090630.1.1	Tomato	nucleus	35.89	38.92
HORVU2Hr1G127700.1	Barley	nucleus	31.71	38.61
CDY22319	Canola	nucleus	31.59	38.58
TraesCS2D01G477200.1	Wheat	mitochondrion, nucleus	32.98	38.48
AT1G04050.1	Thale cress	nucleus	32.75	38.42
Zm00001d049884_P006	Maize	nucleus	32.98	38.22
TraesCS2D01G566400.1	Wheat	nucleus	32.64	38.13
TraesCS2A01G478000.1	Wheat	mitochondrion, nucleus	32.87	37.99
Zm00001d031851_P002	Maize	nucleus	32.4	37.45
TraesCS2B01G616200.1	Wheat	nucleus	32.06	37.45
TraesCS2B01G501300.2	Wheat	mitochondrion, nucleus	32.17	37.43
EES13161	Sorghum	nucleus	33.91	37.06
Bra033710.1-P	Field mustard	nucleus	32.17	36.93
HORVU2Hr1G127770.1	Barley	nucleus	28.92	35.22
Zm00001d002938_P001	Maize	nucleus	28.8	34.88
CDX96935	Canola	nucleus	31.01	34.06
HORVU6Hr1G057990.5	Barley	nucleus	31.71	33.83
Bra001104.1-P	Field mustard	nucleus	26.48	30.16
CDY42922	Canola	plasma membrane, vacuole	25.9	26.93
Solyc01g068370.2.1	Tomato	nucleus	9.76	24.63
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	26.02	23.78
Solyc03g093720.1.1	Tomato	nucleus	7.2	20.67
Solyc03g093740.1.1	Tomato	nucleus	6.85	19.22
Solyc09g082050.2.1	Tomato	nucleus	13.94	18.55
Solyc02g094520.2.1	Tomato	nucleus	13.36	16.99
Solyc10g077070.1.1	Tomato	nucleus	13.47	16.25
Solyc12g096990.1.1	Tomato	nucleus	11.73	15.19
Solyc09g090810.1.1	Tomato	nucleus	12.2	15.09
Solyc03g093760.1.1	Tomato	nucleus	12.2	13.17
Solyc03g093710.1.1	Tomato	nucleus	12.43	12.77
Solyc03g093700.1.1	Tomato	nucleus	12.2	12.51
Solyc06g060960.1.1	Tomato	nucleus	13.82	11.28
Solyc08g077940.1.1	Tomato	nucleus	12.78	10.61
Solyc02g089970.2.1	Tomato	nucleus	18.47	10.54
Solyc03g093770.1.1	Tomato	golgi, plasma membrane	4.3	9.14
CDY42923	Canola	mitochondrion	0.23	1.43
CDX92068	Canola	mitochondrion	0.23	1.43

Protein Annotations

KEGG:00310+2.1.1.43	Gene3D:1.10.8.850	MapMan:12.3.3.7	Gene3D:2.170.270.10	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968
InterPro:IPR001214	InterPro:IPR007728	InterPro:IPR025776	UniProt:K4CAN1	PFAM:PF00856	PFAM:PF05033
PFAM:PF10440	PFscan:PS50280	PFscan:PS50867	PFscan:PS51580	PANTHER:PTHR22884	PANTHER:PTHR22884:SF460
InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00468	SUPFAM:SSF82199	InterPro:SUVR4/1/2
EnsemblPlantsGene:Solyc06g083760.2	EnsemblPlants:Solyc06g083760.2.1	UniParc:UPI000276B5EC	InterPro:WIYLD_domain	SEG:seg	:

Description

No Description!

Coordinates

chr6:+:49094714..49101381

Molecular Weight (calculated)

96138.7 Da

IEP (calculated)

5.016

GRAVY (calculated)

-0.643

Length

861 amino acids

Sequence
(BLAST)

001: MPSNPKVAKA FRAMKNIGIS QEKVKPVLKD LLKLYDKNWE LIEEENYRVL ADAIFEKEEA TESQKPENID QEEVLEEEAA DEEPERPLKR LRSRHQEVHS
101: SSISAGTSFK KVEEQAELPG TNSQGCSLGP ELNNRNAAAE SQSVPCLTYV RKEGKQPVSP NSADRLENNA NSRKNRLKGK ETQTPQIISK EKGLVLGKAS
201: RASILKKPKT EPDEPHTVDM PQLEVPLAVI HPEPSNDKGS SNGNASRKQP DTSETSAAEL RGGREADKDI PTFSNGLVTS HELVKPQNQC YSNIDVASST
301: FGEVKLSINC DAALGRSDFH LPSLEAVVKL VEDKCLKPFK TLDPNFSVPK LMKDMCECFL ELGTQYNHEL QETAKVDAEN DIGYRSMALV SSNGSINLEL
401: DSGEDQPEKS QLPLPCNGHT NSAQTDQTTS VRNCGSVPEI DQNILEHLMS ESPVALCGSK NLELDAGEAQ PEKPQLHPCN SHNNSASTDQ IASVENCGSA
501: PEIDQNILDH VTFQSPVPLC ESTQDETGSC VVTDITRGQE EVMISLVNEV NDKIPPSFNY IAHNVVFQNA YLNFSLARIG DDNSCSTCSG DCLSLSTPCA
601: CAYETGGNFA YTKEGLVIEE LLKESISMNR DPKKHCQFFC KECPLERSKN EDIIEPCKGH LVRNFIKECW WKCRCDKQCG NRVVQRGISR KLQVFMTPDG
701: KGWGLRTLED LPRGAFICEY VGEVLTNAEL FDRVSQSHNR EEHSYPVLLD ADWGSEGVLK DEDALCLDAT FFGNVARFIN HRCFDSNMVE IPVEIETPDH
801: HYYHLAFFTT RKVKALEELT WDYGIDFDDH EHPVKAFKCQ CGSKFCRNMK RPRRNRARKG W

Best Arabidopsis Sequence Match ( AT3G04380.2 )
(BLAST)

001: MISLSGLTSS VESDLDMQQA MLTNKDEKVL KALERTRQLD IPDEKTMPVL MKLLEEAGGN WSYIKLDNYT ALVDAIYSVE DENKQSEGSS NGSSIQVVQK
101: QPQLSNGDRK RKYKSRIADI TKGSESVKIP LVDDVGSEAV PKFTYIPHNI VYQSAYLHVS LARISDEDCC ANCKGNCLSA DFPCTCARET SGEYAYTKEG
201: LLKEKFLDTC LKMKKEPDSF PKVYCKDCPL ERDHDKGTYG KCDGHLIRKF IKECWRKCGC DMQCGNRVVQ RGIRCQLQVY FTQEGKGWGL RTLQDLPKGT
301: FICEYIGEIL TNTELYDRNV RSSSERHTYP VTLDADWGSE KDLKDEEALC LDATICGNVA RFINHRCEDA NMIDIPIEIE TPDRHYYHIA FFTLRDVKAM
401: DELTWDYMID FNDKSHPVKA FRCCCGSESC RDRKIKGSQG KSIERRKIVS AKKQQGSKEV SKKRK

Arabidopsis Description

SUVR4Histone-lysine N-methyltransferase SUVR4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W595]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.