Factsheet for Solyc07g007860.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
vacuole 5
plasma membrane 5
extracellular 6
endoplasmic reticulum 5
golgi 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079355	Potato	extracellular	86.23	86.86
Solyc12g009650.1.1	Tomato	nucleus	68.84	35.85
Bra037196.1-P	Field mustard	endoplasmic reticulum, plasma membrane	60.87	33.07
CDX81428	Canola	endoplasmic reticulum, plasma membrane	60.87	32.81
Zm00001d002094_P001	Maize	extracellular, plastid	43.48	29.56
CDY18576	Canola	endoplasmic reticulum, plasma membrane	59.42	29.29
AT2G10940.2	Thale cress	endoplasmic reticulum, plasma membrane	61.59	29.21
Zm00001d026436_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	42.03	28.43
EES12957	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	42.75	27.19
Os04t0644400-01	Rice	nucleus	34.06	25.82
Solyc08g078890.1.1	Tomato	extracellular, golgi, plasma membrane	50.72	23.97
TraesCS2B01G546700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	44.2	21.79
TraesCS2D01G519700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	44.93	21.45
TraesCS2A01G518100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	44.93	21.23
HORVU2Hr1G114680.2	Barley	endoplasmic reticulum	44.93	14.8

Protein Annotations

Gene3D:1.10.110.10	MapMan:35.2	InterPro:Bifun_inhib/LTP/seed_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0009506	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0016020	GO:GO:0048046	InterPro:Hydrophob_seed	UniProt:K4CBQ6	PFAM:PF14547
PANTHER:PTHR31731	PANTHER:PTHR31731:SF54	SUPFAM:SSF47699	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc07g007860.1	EnsemblPlants:Solyc07g007860.1.1
TMHMM:TMhelix	UniParc:UPI000276AFFF	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7:+:2542742..2543158

Molecular Weight (calculated)

14656.6 Da

IEP (calculated)

7.881

GRAVY (calculated)

0.587

Length

138 amino acids

Sequence
(BLAST)

001: MESSNTKTTT LFFISMLLIS SSFTPILGCG HCKKHKKKPI IISPPPPIEV PTTSCPIDTI KLGACVDLLG GLVHIGLGNP VVNECCPIIE GLVEIEAAVC
101: LCTTLKLKLL NLNLYVPLAL QLLLTCGKTP PPGYTCSL

Best Arabidopsis Sequence Match ( AT2G10940.2 )
(BLAST)

001: MDSSKLSSLS LCLFLICIIY LPQHSLACGS CNPRKGGKHS PKAPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTIPKLPVPP VTVPKLPVPP
101: VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPLPP ISGLPIPPVV GPNLPLPPLP IVGPILPPGT TPPATGGKDC PPPPGSVKPP
201: SGGGKATCPI DTLKLGACVD LLGGLVKIGL GDPAVNKCCP LLKGLVEVEA AACLCTTLKL KALDLNLYVP VALQLLLTCG KNPPPGYTCS I

Arabidopsis Description

At2g10940/F15K19.1 [Source:UniProtKB/TrEMBL;Acc:Q9SKI0]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.