Factsheet for Solyc09g072890.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g083760.2.1	Tomato	nucleus	62.91	60.28
TraesCSU01G137800.1	Wheat	nucleus	24.24	47.96
KRG97025	Soybean	nucleus	15.52	45.07
GSMUA_Achr1P20340_001	Banana	nucleus	38.42	44.65
VIT_07s0005g04190.t01	Wine grape	mitochondrion, nucleus	44.97	43.75
Zm00001d051126_P004	Maize	nucleus	26.55	43.2
CDX92067	Canola	nucleus	24.61	43.01
KRG95723	Soybean	nucleus	37.7	42.96
AT3G04380.1	Thale cress	nucleus	25.21	42.28
KRH34133	Soybean	nucleus	35.03	42.13
TraesCS2B01G503200.1	Wheat	nucleus	30.18	41.43
TraesCS2A01G478800.1	Wheat	nucleus	29.94	41.17
TraesCS2D01G478100.1	Wheat	nucleus	29.82	41.14
KRG92731	Soybean	nucleus	35.39	40.95
Bra036004.1-P	Field mustard	nucleus	30.79	40.64
OQU85329	Sorghum	nucleus	33.33	40.56
KRH32246	Soybean	nucleus	40.24	40.44
KRH68776	Soybean	nucleus	32.73	39.88
CDY14903	Canola	nucleus	30.79	39.69
CDX94744	Canola	nucleus	32.48	39.12
KRH19618	Soybean	nucleus	38.91	39.05
Os02t0621100-01	Rice	nucleus	34.91	38.87
AT5G43990.9	Thale cress	nucleus	34.79	38.78
TraesCS6B01G255000.1	Wheat	nucleus	31.88	38.62
TraesCS6D01G208400.1	Wheat	nucleus	31.76	38.47
TraesCS6A01G226600.1	Wheat	nucleus	31.76	38.47
Solyc09g090630.1.1	Tomato	nucleus	36.85	38.29
TraesCS2D01G378500.3	Wheat	nucleus	31.15	37.91
CDY49341	Canola	nucleus	25.58	37.88
CDY22319	Canola	nucleus	32.36	37.87
EES15150	Sorghum	nucleus	33.82	37.75
TraesCS2B01G399300.4	Wheat	nucleus	30.91	37.67
TraesCS2A01G382000.5	Wheat	nucleus	30.79	37.52
HORVU2Hr1G107560.8	Barley	mitochondrion, nucleus	32.85	37.28
TraesCS2D01G477200.1	Wheat	mitochondrion, nucleus	33.21	37.13
AT1G04050.1	Thale cress	nucleus	32.85	36.92
HORVU7Hr1G064110.6	Barley	nucleus, plastid	27.03	36.68
TraesCS2A01G478000.1	Wheat	mitochondrion, nucleus	32.97	36.51
Zm00001d049884_P006	Maize	nucleus	32.73	36.34
Bra033710.1-P	Field mustard	nucleus	32.97	36.27
TraesCS2B01G501300.2	Wheat	mitochondrion, nucleus	32.24	35.95
HORVU2Hr1G127700.1	Barley	nucleus	30.67	35.78
Zm00001d031851_P002	Maize	nucleus	32.12	35.57
EES13161	Sorghum	nucleus	33.82	35.41
Zm00001d002938_P001	Maize	nucleus	30.42	35.3
TraesCS2D01G566400.1	Wheat	nucleus	31.39	35.14
TraesCS2B01G616200.1	Wheat	nucleus	30.42	34.06
CDX96935	Canola	nucleus	31.15	32.78
HORVU6Hr1G057990.5	Barley	nucleus	31.88	32.59
HORVU2Hr1G127770.1	Barley	nucleus	27.88	32.53
Bra001104.1-P	Field mustard	nucleus	26.06	28.44
CDY42922	Canola	plasma membrane, vacuole	25.45	25.36
Solyc01g068370.2.1	Tomato	nucleus	10.3	24.93
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	25.58	22.4
Solyc03g093720.1.1	Tomato	nucleus	7.27	20.0
Solyc03g093740.1.1	Tomato	nucleus	7.27	19.54
Solyc09g082050.2.1	Tomato	nucleus	12.73	16.23
Solyc10g077070.1.1	Tomato	nucleus	13.94	16.11
Solyc02g094520.2.1	Tomato	nucleus	12.48	15.21
Solyc12g096990.1.1	Tomato	nucleus	12.12	15.04
Solyc09g090810.1.1	Tomato	nucleus	11.76	13.94
Solyc03g093700.1.1	Tomato	nucleus	12.73	12.51
Solyc03g093760.1.1	Tomato	nucleus	12.0	12.42
Solyc03g093710.1.1	Tomato	nucleus	12.0	11.81
Solyc02g089970.2.1	Tomato	nucleus	19.15	10.47
Solyc06g060960.1.1	Tomato	nucleus	13.33	10.43
Solyc08g077940.1.1	Tomato	nucleus	12.12	9.64
Solyc03g093770.1.1	Tomato	golgi, plasma membrane	4.61	9.38
CDX92068	Canola	mitochondrion	0.0	0.0
CDY42923	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	Gene3D:1.10.8.850	MapMan:12.3.3.7	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:IPR001214	InterPro:IPR007728
InterPro:IPR025776	UniProt:K4CUW5	PFAM:PF00856	PFAM:PF05033	PFAM:PF10440	PFscan:PS50280
PFscan:PS50867	PFscan:PS51580	PANTHER:PTHR22884	PANTHER:PTHR22884:SF460	InterPro:Pre-SET_dom	InterPro:SET_dom
SMART:SM00317	SMART:SM00468	SUPFAM:SSF82199	InterPro:SUVR4/1/2	EnsemblPlantsGene:Solyc09g072890.1	EnsemblPlants:Solyc09g072890.1.1
UniParc:UPI000276B17D	InterPro:WIYLD_domain	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr9:-:65577497..65583584

Molecular Weight (calculated)

91480.8 Da

IEP (calculated)

4.798

GRAVY (calculated)

-0.499

Length

825 amino acids

Sequence
(BLAST)

001: MPVNPRVKKA FRAMKSIGIS EEKVKPILKS LLKLYDKNWE LIEEENYRAL ADAIFENEDA EVAEHKQPEN NEVRALPLVQ REEVLEEEAV YEEPERPLKR
101: LRLRFQEGQA SPSSNNSSAG TSLKRPRREE EGELSGPRYQ NQLQGEANPS SVRKNLRLNE TQTSPITSRG QSSVSAKSSH ASKLKEPKTE PGGELSSKQK
201: MSGSLALIKP KDEPYTDDMP LFEVPIAVIH PEPSNKGDTS SGNTSRSEPS AIDLRSVRDS GIMTSLNVMT TSRELIEVQD RCHVDGDIAS SPSGEVKISI
301: SCDPALCRSS DFHMPSVESV LRMVELKCLK SYRIMDPNFS LMKLMKDMCE CVLELGTQHS PELQSTKDVA AENDFGSRSM TVNSLNEGMN FEIDAGDAQP
401: KIPPRSPPRI GEDCIQAGQI ASMGNCGSTT GTDQNGIEQT NPWSMDAPCG LILGEIGSFD SLNELLNSDL GAGEAQPEIP HLNSYFGGDS TQADHTASTS
501: NCGIAPDTSQ SRLEEMVSCE ATPRDVVSVE VIDITKGQEN VVISLVNEVN SNQPPSFHYI ASNVVFQNAY VNFSLARIGD DNSCSTCSGD CLSLSTPCAC
601: AHITGGDFAY TKEGLIKEEF LKECISMNRD PKKHCQLFCK VCPLERSKNE DIIEACKGHL VRNFIKECWW KCGCSKQCGN RVVQRGISHK LQVFMTPEGK
701: GWGLRTLEDL PRGAFVCEYV GEVLTNIELF DRVARSPNGE EHSYPALLDA DWGSEGVLKD EEALCLDATF YGNVARFINH RCFDSNLVEI PVEIETPDHH
801: YYHLAFFTTR KIKAMEELTW VRLWY

Best Arabidopsis Sequence Match ( AT3G04380.1 )
(BLAST)

001: MISLSGLTSS VESDLDMQQA MLTNKDEKVL KALERTRQLD IPDEKTMPVL MKLLEEAGGN WSYIKLDNYT ALVDAIYSVE DENKQSEGSS NGNRGKNLKV
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK

Arabidopsis Description

SUVR4Histone-lysine N-methyltransferase SUVR4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W595]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.