Factsheet for Solyc09g090810.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003956	Potato	nucleus	97.56	97.56
Solyc12g096990.1.1	Tomato	nucleus	70.26	73.53
VIT_05s0049g02220.t01	Wine grape	nucleus	64.8	67.11
CDX73506	Canola	nucleus	53.74	59.08
CDX78210	Canola	nucleus	53.45	58.95
Bra007048.1-P	Field mustard	nucleus	53.3	58.8
AT4G13460.2	Thale cress	nucleus	54.17	58.0
KRH49479	Soybean	nucleus	58.48	57.4
AT2G33290.2	Thale cress	nucleus	53.45	57.14
KRG89164	Soybean	nucleus	58.48	56.84
CDY23755	Canola	nucleus	50.14	54.79
CDY37735	Canola	nucleus, plastid	49.43	54.0
Bra021840.1-P	Field mustard	nucleus, plastid	49.43	54.0
KRH07636	Soybean	nucleus	43.53	52.7
GSMUA_Achr4P29270_001	Banana	nucleus	40.66	52.6
GSMUA_Achr5P13120_001	Banana	nucleus	45.83	52.55
Os07t0435900-01	Rice	nucleus	50.0	50.88
TraesCS2A01G235400.1	Wheat	nucleus	48.56	50.45
TraesCS2D01G240000.1	Wheat	nucleus	48.71	50.22
HORVU2Hr1G053260.1	Barley	nucleus	48.56	50.15
CDY19475	Canola	nucleus	39.66	50.0
GSMUA_Achr1P01130_001	Banana	nucleus	39.37	49.82
TraesCS2B01G254700.1	Wheat	nucleus	47.84	49.48
CDY17156	Canola	nucleus	40.23	49.47
EER96294	Sorghum	nucleus	49.28	48.31
Zm00001d005445_P001	Maize	nucleus	37.79	46.06
GSMUA_Achr6P36730_001	Banana	nucleus	38.79	45.76
Bra005511.1-P	Field mustard	plastid	40.23	45.68
Zm00001d019520_P001	Maize	nucleus	37.5	39.73
Solyc03g093740.1.1	Tomato	nucleus	14.37	32.57
Solyc09g082050.2.1	Tomato	nucleus	28.74	30.91
Solyc03g093720.1.1	Tomato	nucleus	12.64	29.33
Solyc10g077070.1.1	Tomato	nucleus	29.74	28.99
Solyc02g094520.2.1	Tomato	nucleus	25.57	26.29
Solyc03g093770.1.1	Tomato	golgi, plasma membrane	14.37	24.69
Solyc03g093760.1.1	Tomato	nucleus	25.29	22.08
Solyc01g068370.2.1	Tomato	nucleus	10.78	21.99
Solyc03g093700.1.1	Tomato	nucleus	26.01	21.57
Solyc03g093710.1.1	Tomato	nucleus	25.72	21.36
Solyc08g077940.1.1	Tomato	nucleus	28.45	19.09
Solyc06g060960.1.1	Tomato	nucleus	28.59	18.86
Solyc06g083760.2.1	Tomato	nucleus	15.09	12.2
Solyc09g072890.1.1	Tomato	nucleus	13.94	11.76
Solyc09g090630.1.1	Tomato	nucleus	12.5	10.96
Solyc02g089970.2.1	Tomato	nucleus	15.95	7.36

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009987	GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538
GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR025794
InterPro:IPR036987	UniProt:K4CWA7	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280
PFscan:PS50867	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF95	InterPro:PUA-like_sf
InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf
InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	EnsemblPlantsGene:Solyc09g090810.1	EnsemblPlants:Solyc09g090810.1.1	UniParc:UPI000276AFA8
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr9:+:70225549..70227639

Molecular Weight (calculated)

78597.2 Da

IEP (calculated)

5.882

GRAVY (calculated)

-0.397

Length

696 amino acids

Sequence
(BLAST)

001: MGSLVPFQDL NLQPESTNFT SSTTPNPRII PKIEPKLEPL DEYTQADLQT PAFFSNPSPN FNTSSGSAFR RNPQLATHEA DSQSPSSIIP EVPPGCDRNN
101: VYVYSEYNRI SEMFKEAFTE KMQRYGDVEV VGNQNQDSVD VVMEDADARA IVPVSNNDTQ VAEVVVARRK YQQRSSELVR VTDLKVEDQL YFREAVRKTR
201: MLYDSLRILA MVEDDGSQHL GPYRKPRGDL KACQILREHG LWMNRDKRIV GPIPGVLIGD VFFFRMELLV VGLHGQAQAG IDYVPASQSS NREPIATSVI
301: VSGGYEDDQD GGDVIIYTGH GGQDKHSRQC VHQKLECGNL ALERSMHYGI EVRVIRGFKY EGSGSASGKV YVYDGLYRIV ECWFDVGKSG FGVYKYKLVR
401: IENQEEMGSA ILRFAQNLRI RPLEARPTGY VTLDISRKKE NVPVFLFNDI DDNHDPAYFE YLVKPIYPPH VSLNVHSGNG CQCIDGCADN CFCAMRNGGQ
501: FAYDYNGILL RGKPLVFECG PHCRCPPTCR NRVTQKGLRN RFEVFRSRET GWGVRSLDLI QAGSFICEYT GVVLTREQAQ IFTMNGDSLV YPSRFPDRWA
601: EWGDLSQIYP NYERPAYPSI PPLDFAMDVS RMRNVACYIS HSSSPNALVQ PVLYDHNHVA FPHMMLFAME NIPPLKEISI DYGVADEWTG KLAICD

Best Arabidopsis Sequence Match ( AT4G13460.1 )
(BLAST)

001: MGSSHIPLDP SLNPSPSLIP KLEPVTESTQ NLAFQLPNTN PQALISSAVS DFNEATDFSS DYNTVAESAR SAFAQRLQRH DDVAVLDSLT GAIVPVEENP
101: EPEPNPYSTS DSSPSVATQR PRPQPRSSEL VRITDVGPES ERQFREHVRK TRMIYDSLRM FLMMEEAKRN GVGGRRARAD GKAGKAGSMM RDCMLWMNRD
201: KRIVGSIPGV QVGDIFFFRF ELCVMGLHGH PQSGIDFLTG SLSSNGEPIA TSVIVSGGYE DDDDQGDVIM YTGQGGQDRL GRQAEHQRLE GGNLAMERSM
301: YYGIEVRVIR GLKYENEVSS RVYVYDGLFR IVDSWFDVGK SGFGVFKYRL ERIEGQAEMG SSVLKFARTL KTNPLSVRPR GYINFDISNG KENVPVYLFN
401: DIDSDQEPLY YEYLAQTSFP PGLFVQQSGN ASGCDCVNGC GSGCLCEAKN SGEIAYDYNG TLIRQKPLIH ECGSACQCPP SCRNRVTQKG LRNRLEVFRS
501: LETGWGVRSL DVLHAGAFIC EYAGVALTRE QANILTMNGD TLVYPARFSS ARWEDWGDLS QVLADFERPS YPDIPPVDFA MDVSKMRNVA CYISHSTDPN
601: VIVQFVLHDH NSLMFPRVML FAAENIPPMT ELSLDYGVVD DWNAKLAICN

Arabidopsis Description

SUVH9Histone-lysine N-methyltransferase family member SUVH9 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0G7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.