Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400092251 | Potato | cytosol | 62.83 | 65.1 |
| KRG99455 | Soybean | nucleus | 21.39 | 30.77 |
| KRH45560 | Soybean | nucleus | 21.66 | 30.57 |
| Solyc04g076270.1.1 | Tomato | nucleus | 23.53 | 23.66 |
| KRH69663 | Soybean | nucleus | 18.72 | 23.57 |
| Solyc07g007230.2.1 | Tomato | nucleus | 22.46 | 19.72 |
| KRH74501 | Soybean | nucleus | 20.59 | 15.88 |
| Solyc11g006140.1.1 | Tomato | nucleus | 24.33 | 15.29 |
| Solyc11g006170.1.1 | Tomato | nucleus | 24.33 | 14.02 |
| Solyc01g105780.2.1 | Tomato | nucleus | 24.87 | 12.97 |
Protein Annotations
| EnsemblPlants:Solyc11g010540.1.1 | EnsemblPlantsGene:Solyc11g010540.1 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR45496 | PFAM:PF00226 | PFscan:PS50076 | SEG:seg | SUPFAM:SSF46565 |
| UniParc:UPI0002769649 | UniProt:K4D5L5 | MapMan:12.5.1.16.2 | : | : | : |
Description
No Description!
Coordinates
chr11:-:3589421..3590545
Molecular Weight (calculated)
42652.8 Da
IEP (calculated)
4.755
GRAVY (calculated)
-0.685
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MENQRFKAKD THNAKFKTYL TASEYFLQQR NFEDCRNYAL KAIEIDSNQT SPSQILAIAN VLLLSTTINE HPNHYSILNL PLYTQNPQLI KTQFTNVTNL
101: LNPNKNRYPF ASEAFGFVLK AWSVLSNPTQ KTRFDNDLKN RGEQKGSFWT VCPYCYYVYE FLKDYEDCCL RCPNEKCRRV FHGVPIVGPS PPPQVAEKGE
201: YHCLGFSVLG SGTHPLWSPF VATKTNKNNV ESGIAKKNNV DEFIEISDDD EDDNGGNEKS LGVEELFVET NGVKVDTGGD FKEKRRKMEG KSLNKVLGKG
301: NKVKINEIVY NDDFETNEND VEFGNAGEKI NENDVEPGNA GEKTTENTVE FFTRDDIYVM MQEEFDIGTL FLYE
101: LNPNKNRYPF ASEAFGFVLK AWSVLSNPTQ KTRFDNDLKN RGEQKGSFWT VCPYCYYVYE FLKDYEDCCL RCPNEKCRRV FHGVPIVGPS PPPQVAEKGE
201: YHCLGFSVLG SGTHPLWSPF VATKTNKNNV ESGIAKKNNV DEFIEISDDD EDDNGGNEKS LGVEELFVET NGVKVDTGGD FKEKRRKMEG KSLNKVLGKG
301: NKVKINEIVY NDDFETNEND VEFGNAGEKI NENDVEPGNA GEKTTENTVE FFTRDDIYVM MQEEFDIGTL FLYE
001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.