Factsheet for Solyc11g030570.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
plastid 1
endoplasmic reticulum 2
extracellular 2
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	mitochondrion
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g061990.1.1	Tomato	plasma membrane	47.62	15.71
Solyc10g045750.1.1	Tomato	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc11g030570.1.1	EnsemblPlantsGene:Solyc11g030570.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006091	GO:GO:0006139
GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0042773	GO:GO:0055114
InterPro:NADH_UbQ_OxRdtase	InterPro:ND/Mrp_mem	PANTHER:PTHR43507	PANTHER:PTHR43507:SF6	PFAM:PF00361	UniParc:UPI0002769AC1
UniProt:K4D7J3	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr11:+:21922883..21923074

Molecular Weight (calculated)

6871.6 Da

IEP (calculated)

7.351

GRAVY (calculated)

1.078

Length

63 amino acids

Sequence
(BLAST)

1: MVAVYIWLPE VHVEAPTAGS VILARIALKL GTYGFLRFSV PMFPEATLCS TPFIYTLSAI AII

Best Arabidopsis Sequence Match ( ATMG00580.1 )
(BLAST)

001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH

Arabidopsis Description

NAD4NADH-ubiquinone oxidoreductase chain 4 [Source:UniProtKB/TrEMBL;Acc:G1C2U9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.