Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- nucleus 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400056702 | Potato | endoplasmic reticulum, extracellular, plastid | 5.63 | 92.54 |
| KRH29119 | Soybean | mitochondrion | 19.69 | 49.43 |
| VIT_03s0038g01920.t01 | Wine grape | plasma membrane | 51.18 | 42.34 |
| Os10t0154600-01 | Rice | peroxisome, plasma membrane, plastid | 20.42 | 34.83 |
| GSMUA_Achr11P... | Banana | plasma membrane | 33.12 | 27.48 |
| KRH24149 | Soybean | nucleus | 45.92 | 25.74 |
| AT4G38760.1 | Thale cress | cytosol | 39.47 | 22.14 |
| CDX72740 | Canola | cytosol | 39.29 | 21.99 |
| Bra033575.1-P | Field mustard | cytosol | 39.2 | 21.7 |
| Zm00001d030340_P037 | Maize | plasma membrane | 31.03 | 19.03 |
| CDY22413 | Canola | cytosol | 29.67 | 18.6 |
| OQU82713 | Sorghum | plastid | 31.13 | 17.49 |
| TraesCS7D01G153000.1 | Wheat | cytosol, plasma membrane, plastid | 30.76 | 17.28 |
| HORVU7Hr1G031100.1 | Barley | cytosol | 30.49 | 17.12 |
| TraesCS7B01G055100.1 | Wheat | cytosol, plasma membrane, plastid | 30.49 | 17.11 |
| TraesCS7A01G151100.1 | Wheat | plastid | 30.4 | 17.06 |
| Os10t0154566-00 | Rice | plastid | 0.54 | 3.77 |
| Solyc11g039880.1.1 | Tomato | nucleus | 0.54 | 0.81 |
| Solyc11g039890.1.1 | Tomato | cytosol | 0.09 | 0.6 |
| GSMUA_Achr11P... | Banana | cytosol | 0.0 | 0.0 |
| VIT_03s0038g01870.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_03s0038g01880.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| Zm00001d030342_P001 | Maize | plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:23.5.1.1.2.2 | GO:GO:0003674 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005635 | GO:GO:0006405 | GO:GO:0006606 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0017056 | GO:GO:0044611 | UniProt:K4D7W3 | PANTHER:PTHR31431 | EnsemblPlantsGene:Solyc11g039870.1 | EnsemblPlants:Solyc11g039870.1.1 |
| UniParc:UPI0002769E08 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:41561501..41571592
Molecular Weight (calculated)
123485.0 Da
IEP (calculated)
6.751
GRAVY (calculated)
0.041
Length
1102 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVCNCAKRKN LLPMQKIQVG SARLLSSLFI IRDDSQSYAI SSVCFGLDDK QIYNFKNTIC SILCQEKVES EDLIIATFKM LTSAARYQAS FLTAVIALEE
0101: NPISESCKGD NHPANNDALQ CNAANLLDCI WIYVKRSDDL VMTKSRIMCN VLNFLKALWQ GAAHYTSLLK QLRNSDFWEK LLISAVLSIS KKSCQSESTT
0201: KLELQNLAYK YQCQHNVLDV VACEIILQKK ILHSELVTEE SSKCLHNGSD GCKVATAESS CNLKEIFGAW CGSSLDAETI KTFVSFEYDD SVKLRARVAA
0301: GLFAVRIMCK VKGGDRGSLS VSLVDKITNL WQKLRKLPAF SELMAIYTKH GYRGGNELDN LILNDLFYHL QGELEGRQIS HMSFKELSQY LLQSNFLQTY
0401: QCKHHEDIFP QTDGVCLYDT DRLQGDMAID LWDLSDWKAS KAVAEMLLLS LQNVNVMVSL TTSKLSALIA LATTFSISDN DNVSFESLDN EVRSGRKIPE
0501: KSLSSSIDNI CQSLHRTIEL LPSVSDASED IVNILAAQAE LLFHFTRSPS THLSLSTCLL ILKTAGCGLK VLCNCRQLVT GVLFPMKIFL MLVLFSLQSS
0601: RRGSHLGVQT KIEHNEALAE AANVSLGLLP LICSCIELTE HCSLSVIITD QIIKGFSTLT TWFPIIQKHL PMQRIVLKLQ DKSSYSNIGI ILKFLLTIAH
0701: VKEGAEMLVK TGFFASLSVL LADLSNGRPL SVVERERNLA DTFENNERAQ PIWGLSLAVV TAIINSLGES SIFNVEHVVT YFLLEKADLI SYYLSAPDFP
0801: PDDHDKKRLR ALKPHTSLSA LREIENTVML ICVLAKHRNT WSRAIKEMES QLRERCIHLL AFISCGTPRH GESQGRVPPI FCHPTIREEY EWHKKPSSIN
0901: SKNGWFAFSA YCCSLNPKYS SFSSRTGTVI KDQPNEHVNL TSQTHFSDAM SIQIYRITSL LLKFLCQQAE DAAARAEEVG FVDLSHFPEL PMPDILHCLQ
1001: DQGISIVTEL CEVNKLKQVS SEIQGVCVLL LQITVMALYL EFCVIQICGM RPVHGHVEYF SKEFYALTKA MEGNAFLKES MNSLKQMVSF VYPELLQAED
1101: LI
0101: NPISESCKGD NHPANNDALQ CNAANLLDCI WIYVKRSDDL VMTKSRIMCN VLNFLKALWQ GAAHYTSLLK QLRNSDFWEK LLISAVLSIS KKSCQSESTT
0201: KLELQNLAYK YQCQHNVLDV VACEIILQKK ILHSELVTEE SSKCLHNGSD GCKVATAESS CNLKEIFGAW CGSSLDAETI KTFVSFEYDD SVKLRARVAA
0301: GLFAVRIMCK VKGGDRGSLS VSLVDKITNL WQKLRKLPAF SELMAIYTKH GYRGGNELDN LILNDLFYHL QGELEGRQIS HMSFKELSQY LLQSNFLQTY
0401: QCKHHEDIFP QTDGVCLYDT DRLQGDMAID LWDLSDWKAS KAVAEMLLLS LQNVNVMVSL TTSKLSALIA LATTFSISDN DNVSFESLDN EVRSGRKIPE
0501: KSLSSSIDNI CQSLHRTIEL LPSVSDASED IVNILAAQAE LLFHFTRSPS THLSLSTCLL ILKTAGCGLK VLCNCRQLVT GVLFPMKIFL MLVLFSLQSS
0601: RRGSHLGVQT KIEHNEALAE AANVSLGLLP LICSCIELTE HCSLSVIITD QIIKGFSTLT TWFPIIQKHL PMQRIVLKLQ DKSSYSNIGI ILKFLLTIAH
0701: VKEGAEMLVK TGFFASLSVL LADLSNGRPL SVVERERNLA DTFENNERAQ PIWGLSLAVV TAIINSLGES SIFNVEHVVT YFLLEKADLI SYYLSAPDFP
0801: PDDHDKKRLR ALKPHTSLSA LREIENTVML ICVLAKHRNT WSRAIKEMES QLRERCIHLL AFISCGTPRH GESQGRVPPI FCHPTIREEY EWHKKPSSIN
0901: SKNGWFAFSA YCCSLNPKYS SFSSRTGTVI KDQPNEHVNL TSQTHFSDAM SIQIYRITSL LLKFLCQQAE DAAARAEEVG FVDLSHFPEL PMPDILHCLQ
1001: DQGISIVTEL CEVNKLKQVS SEIQGVCVLL LQITVMALYL EFCVIQICGM RPVHGHVEYF SKEFYALTKA MEGNAFLKES MNSLKQMVSF VYPELLQAED
1101: LI
0001: MANPNSVDSS LWWDPFDSLL TDLENASLSD DLPQPIAKKL EENHAWFVGT LSMFKPPSEK SKEALNSDLV KIKEHQLVIK PQLKDKALRI SSHLNLDEIQ
0101: SYILVERSME QEYGTTDSVA QELTQEFIDM ILLQYYIQRQ CLLKCTKRIL IHALYAPREE SSIKEEAVKL ISDGLERRQS SVLEDLLSSC FPKNMDVNLF
0201: TLWAEETLIE DNLILDILFL IYNESYCSCN GERWRKLCSF YKGILSGSYN FSKLAVSVEA QHSACRVQIQ LLMILIETLD MENLLQMVHD GVPFRSGTCV
0301: FSIVDVQEMD ATISSLNTSE VNEAGPLVLA WAVFLCLISS LPGKEESPFL MDIDHVSYVH QAFEAASLSY FLEILQSNLL NDFDGPISGH RSVVRTFISA
0401: FIASYEINLQ LEDGTLELIL DILSKVYQGE ESLCCQFWDR KSFVDGPIRC LLFDLESEFP FRSAEFIRLL SSLSEGSWPA ECVYNFLDKS VGVSTLFDIT
0501: SDSPADDASQ LVETSRPLHI PGLEGLVIPS NTRGRILRVI SENTVLVRWE YSLSGIIVLI IRLANKLYIG NNREAFVTLE LLRRMVTFNK AVCFSLLNIS
0601: HFFYVQESYV NGKMESDVRV VDIICNSVRS LTFDSGGAAV MAMAIDILAK LLRCSPSSVA PMVLKSNIFD MTSCSDVPDS GYNISLSGSW SLSGKLAKMI
0701: LIDCEKNDTS CPLVISVLEF TMQLVEGGLE NDVVFALVVF SLQYILASHE YWKYNHGNMR WKVTLKVIEL MKTCLRFSKF STKLRDVLLD ILLNDASVHS
0801: ALFRIICTTT QNLENLCSSR FIEPAEIEGW QLAIVSVLDV LNVILSQFSE STHSGLPVFH QAMLSSTTKP ISVVAAITSL ISYFRNPTIQ VCAAQVLSKL
0901: FALAESSQLY IISNAGFGLD NKQITDLRNS VTQIVLDLSG QNEHLVVATL KLLTVAARFQ PALLVAIFDS DEDSDSSNVK QSRKDASSIP DWACKSRLLH
1001: TILQYVERAT DFVDRHTDIL LGLLDFLKTL WQEAGQYANM LEPFKASKKL WQEFSDIISQ ASKIKDSTVG SLGKEEISKL LVKYQCQASV LEIMACNMFL
1101: YKKLLFAESL KKPCVETKKT ASNGVSPPKL TWTADSDPKD IFSKWCDISV LDGIIQSVSS LDGESEINFQ AKVAAVLLIV HLIVKLETSG AGALSMVLVE
1201: KIKLISETLC AQPAFSELLA QYSKLGYSGG KELMPMIFSD LYCHLQGKLE GRDIPTGPFK ELFQFLVETS FWEKYKQKTN KDVNMALGDC LFDTQQIQTE
1301: LGIDIWDFSE WKTSKTTAEE MLNYMQRANS MVLLSTSQLS VLHALISVLI LYEDNSLEES AAAERKIPSR VTLLSIDKVC RKFCTTVDSL ASLWDAPKIV
1401: FDILTAQADL LSRLLKSAKK NLSLSVCALV LRNVGPGLKI LGSLRHSNAI LKKTINLLLE VLLLVVGFGS DNSNSSGMGH MVLAKDFAEI SDATIGLLPL
1501: LCNFMGNPEY LTLCLTTVDL ILRNFLTPET WFPIIQSQLR LQHVILQLQD KKSTTSVSAI LKFFLTIAQV HGGAQMLLNS GFFSTLRALL MEFPDGMSTL
1601: VSDNEKGSLL EKTEKTQHIW GIGLAVVTAM VHSLGSVSAG ADIVESVISY FFLEKGYMIS YYLAAPDFPS DDRDKVRLRS QRTWTSLAYL RVTEHTLLLL
1701: CALASHWRSW VKIMKDMDSP LREMTIHLLA FISKGAQRLR ESQSHISHLL CPPVAKEEFD SCKRPSFINT KHGWFSLAPL VCVGKPKITA VSISTALVVR
1801: GDTTEHPGSV PQSQFSDSVA IQIYRVASLL LKFLCLQAEG VVTRAEEVGY VDIAHFPELP EPEILHGLQD QATAIVAELC DNYKSKEIPD EVKKLCLMLI
1901: QTTEMSLYLE LCVVQVCRIH PVFGRVDNFS KDLKKLVKAA EVHTYLEPSI DSLKKIAAFL YPGSL
0101: SYILVERSME QEYGTTDSVA QELTQEFIDM ILLQYYIQRQ CLLKCTKRIL IHALYAPREE SSIKEEAVKL ISDGLERRQS SVLEDLLSSC FPKNMDVNLF
0201: TLWAEETLIE DNLILDILFL IYNESYCSCN GERWRKLCSF YKGILSGSYN FSKLAVSVEA QHSACRVQIQ LLMILIETLD MENLLQMVHD GVPFRSGTCV
0301: FSIVDVQEMD ATISSLNTSE VNEAGPLVLA WAVFLCLISS LPGKEESPFL MDIDHVSYVH QAFEAASLSY FLEILQSNLL NDFDGPISGH RSVVRTFISA
0401: FIASYEINLQ LEDGTLELIL DILSKVYQGE ESLCCQFWDR KSFVDGPIRC LLFDLESEFP FRSAEFIRLL SSLSEGSWPA ECVYNFLDKS VGVSTLFDIT
0501: SDSPADDASQ LVETSRPLHI PGLEGLVIPS NTRGRILRVI SENTVLVRWE YSLSGIIVLI IRLANKLYIG NNREAFVTLE LLRRMVTFNK AVCFSLLNIS
0601: HFFYVQESYV NGKMESDVRV VDIICNSVRS LTFDSGGAAV MAMAIDILAK LLRCSPSSVA PMVLKSNIFD MTSCSDVPDS GYNISLSGSW SLSGKLAKMI
0701: LIDCEKNDTS CPLVISVLEF TMQLVEGGLE NDVVFALVVF SLQYILASHE YWKYNHGNMR WKVTLKVIEL MKTCLRFSKF STKLRDVLLD ILLNDASVHS
0801: ALFRIICTTT QNLENLCSSR FIEPAEIEGW QLAIVSVLDV LNVILSQFSE STHSGLPVFH QAMLSSTTKP ISVVAAITSL ISYFRNPTIQ VCAAQVLSKL
0901: FALAESSQLY IISNAGFGLD NKQITDLRNS VTQIVLDLSG QNEHLVVATL KLLTVAARFQ PALLVAIFDS DEDSDSSNVK QSRKDASSIP DWACKSRLLH
1001: TILQYVERAT DFVDRHTDIL LGLLDFLKTL WQEAGQYANM LEPFKASKKL WQEFSDIISQ ASKIKDSTVG SLGKEEISKL LVKYQCQASV LEIMACNMFL
1101: YKKLLFAESL KKPCVETKKT ASNGVSPPKL TWTADSDPKD IFSKWCDISV LDGIIQSVSS LDGESEINFQ AKVAAVLLIV HLIVKLETSG AGALSMVLVE
1201: KIKLISETLC AQPAFSELLA QYSKLGYSGG KELMPMIFSD LYCHLQGKLE GRDIPTGPFK ELFQFLVETS FWEKYKQKTN KDVNMALGDC LFDTQQIQTE
1301: LGIDIWDFSE WKTSKTTAEE MLNYMQRANS MVLLSTSQLS VLHALISVLI LYEDNSLEES AAAERKIPSR VTLLSIDKVC RKFCTTVDSL ASLWDAPKIV
1401: FDILTAQADL LSRLLKSAKK NLSLSVCALV LRNVGPGLKI LGSLRHSNAI LKKTINLLLE VLLLVVGFGS DNSNSSGMGH MVLAKDFAEI SDATIGLLPL
1501: LCNFMGNPEY LTLCLTTVDL ILRNFLTPET WFPIIQSQLR LQHVILQLQD KKSTTSVSAI LKFFLTIAQV HGGAQMLLNS GFFSTLRALL MEFPDGMSTL
1601: VSDNEKGSLL EKTEKTQHIW GIGLAVVTAM VHSLGSVSAG ADIVESVISY FFLEKGYMIS YYLAAPDFPS DDRDKVRLRS QRTWTSLAYL RVTEHTLLLL
1701: CALASHWRSW VKIMKDMDSP LREMTIHLLA FISKGAQRLR ESQSHISHLL CPPVAKEEFD SCKRPSFINT KHGWFSLAPL VCVGKPKITA VSISTALVVR
1801: GDTTEHPGSV PQSQFSDSVA IQIYRVASLL LKFLCLQAEG VVTRAEEVGY VDIAHFPELP EPEILHGLQD QATAIVAELC DNYKSKEIPD EVKKLCLMLI
1901: QTTEMSLYLE LCVVQVCRIH PVFGRVDNFS KDLKKLVKAA EVHTYLEPSI DSLKKIAAFL YPGSL
Arabidopsis Description
Protein of unknown function (DUF3414) [Source:TAIR;Acc:AT4G38760]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.