Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400084945 | Potato | nucleus | 84.58 | 82.13 |
| Solyc10g019150.1.1 | Tomato | nucleus | 62.19 | 76.22 |
| Solyc11g013560.1.1 | Tomato | nucleus | 49.25 | 48.06 |
| Solyc11g013620.1.1 | Tomato | plasma membrane | 44.28 | 35.18 |
| Solyc05g013420.1.1 | Tomato | nucleus | 30.35 | 32.97 |
| Solyc05g013430.1.1 | Tomato | nucleus | 18.41 | 17.62 |
| Solyc02g082380.1.1 | Tomato | nucleus | 18.41 | 16.67 |
| Solyc02g082390.1.1 | Tomato | nucleus | 19.9 | 14.23 |
| TraesCS7A01G135600.1 | Wheat | cytosol | 2.99 | 2.82 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | UniProt:K4D8N7 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR44377 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc11g050730.1 | EnsemblPlants:Solyc11g050730.1.1 |
| TIGRFAMs:TIGR01557 | UniParc:UPI000276A904 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr11:-:15837571..15838176
Molecular Weight (calculated)
22580.6 Da
IEP (calculated)
10.019
GRAVY (calculated)
-0.722
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MERNCTVCGG NGHNQRTCSE KGKSIKLFGV EITTTTSAGG AMSKKDSMER RVKKGNPWTE DEQTAFLKGL DFHGKGNWSK IAKDFVPSRT STQVASHAQK
101: YFMRLLGANE RKYHKKSSVF DLRLDQLEDT HDHAIVPLGN NYKSQNVPSV VPNYYMMKRV LPLTWVYMYP YYHRDYASTS ASATTFNKPL SGISSSSNSS
201: S
101: YFMRLLGANE RKYHKKSSVF DLRLDQLEDT HDHAIVPLGN NYKSQNVPSV VPNYYMMKRV LPLTWVYMYP YYHRDYASTS ASATTFNKPL SGISSSSNSS
201: S
001: MTRRCSHCNH NGHNSRTCPN RGVKLFGVRL TEGSIRKSAS MGNLSHYTGS GSGGHGTGSN TPGSPGDVPD HVAGDGYASE DFVAGSSSSR ERKKGTPWTE
101: EEHRMFLLGL QKLGKGDWRG ISRNYVTTRT PTQVASHAQK YFIRQSNVSR RKRRSSLFDM VPDEVGDIPM DLQEPEEDNI PVETEMQGAD SIHQTLAPSS
201: LHAPSILEIE ECESMDSTNS TTGEPTATAA AASSSSRLEE TTQLQSQLQP QPQLPGSFPI LYPTYFSPYY PFPFPIWPAG YVPEPPKKEE THEILRPTAV
301: HSKAPINVDE LLGMSKLSLA ESNKHGESDQ SLSLKLGGGS SSRQSAFHPN PSSDSSDIKS VIHAL
101: EEHRMFLLGL QKLGKGDWRG ISRNYVTTRT PTQVASHAQK YFIRQSNVSR RKRRSSLFDM VPDEVGDIPM DLQEPEEDNI PVETEMQGAD SIHQTLAPSS
201: LHAPSILEIE ECESMDSTNS TTGEPTATAA AASSSSRLEE TTQLQSQLQP QPQLPGSFPI LYPTYFSPYY PFPFPIWPAG YVPEPPKKEE THEILRPTAV
301: HSKAPINVDE LLGMSKLSLA ESNKHGESDQ SLSLKLGGGS SSRQSAFHPN PSSDSSDIKS VIHAL
Arabidopsis Description
KUA1Transcription factor KUA1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVS0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.