Factsheet for Solyc12g096990.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075191	Potato	nucleus	96.54	97.27
Solyc09g090810.1.1	Tomato	nucleus	73.53	70.26
VIT_05s0049g02220.t01	Wine grape	nucleus	65.86	65.18
CDX73506	Canola	nucleus	54.89	57.66
CDX78210	Canola	nucleus	54.44	57.37
Bra007048.1-P	Field mustard	nucleus	54.29	57.21
AT4G13460.2	Thale cress	nucleus	55.64	56.92
KRH49479	Soybean	nucleus	59.4	55.71
KRG89164	Soybean	nucleus	59.85	55.59
CDY23755	Canola	nucleus	51.13	53.38
AT2G33290.2	Thale cress	nucleus	52.18	53.3
CDY37735	Canola	nucleus, plastid	50.08	52.28
Bra021840.1-P	Field mustard	nucleus, plastid	50.08	52.28
GSMUA_Achr5P13120_001	Banana	nucleus	46.77	51.24
GSMUA_Achr4P29270_001	Banana	nucleus	41.2	50.93
KRH07636	Soybean	nucleus	43.61	50.43
CDY19475	Canola	nucleus	40.9	49.28
TraesCS2A01G235400.1	Wheat	nucleus	49.47	49.1
GSMUA_Achr1P01130_001	Banana	nucleus	40.45	48.91
Os07t0435900-01	Rice	nucleus	50.23	48.83
HORVU2Hr1G053260.1	Barley	nucleus	49.47	48.81
CDY17156	Canola	nucleus	41.5	48.76
TraesCS2D01G240000.1	Wheat	nucleus	49.47	48.74
TraesCS2B01G254700.1	Wheat	nucleus	48.72	48.14
EER96294	Sorghum	nucleus	49.17	46.06
Bra005511.1-P	Field mustard	plastid	41.5	45.02
GSMUA_Achr6P36730_001	Banana	nucleus	39.7	44.75
Zm00001d005445_P001	Maize	nucleus	37.59	43.78
Zm00001d019520_P001	Maize	nucleus	37.29	37.75
Solyc09g082050.2.1	Tomato	nucleus	30.38	31.22
Solyc03g093740.1.1	Tomato	nucleus	14.14	30.62
Solyc10g077070.1.1	Tomato	nucleus	31.28	29.13
Solyc03g093720.1.1	Tomato	nucleus	12.93	28.67
Solyc02g094520.2.1	Tomato	nucleus	26.17	25.7
Solyc03g093770.1.1	Tomato	golgi, plasma membrane	14.44	23.7
Solyc03g093760.1.1	Tomato	nucleus	25.11	20.95
Solyc01g068370.2.1	Tomato	nucleus	10.53	20.53
Solyc03g093700.1.1	Tomato	nucleus	25.41	20.14
Solyc03g093710.1.1	Tomato	nucleus	24.96	19.81
Solyc08g077940.1.1	Tomato	nucleus	28.57	18.32
Solyc06g060960.1.1	Tomato	nucleus	28.87	18.2
Solyc09g072890.1.1	Tomato	nucleus	15.04	12.12
Solyc06g083760.2.1	Tomato	nucleus	15.19	11.73
Solyc09g090630.1.1	Tomato	nucleus	13.83	11.59
Solyc02g089970.2.1	Tomato	nucleus	16.99	7.49

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009987	GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538
GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR025794
InterPro:IPR036987	UniProt:K4DHH2	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280
PFscan:PS50867	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF95	InterPro:PUA-like_sf
InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf
InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	EnsemblPlantsGene:Solyc12g096990.1	EnsemblPlants:Solyc12g096990.1.1	UniParc:UPI0002769ED5

Description

No Description!

Coordinates

chr12:-:65678106..65680327

Molecular Weight (calculated)

74504.3 Da

IEP (calculated)

5.566

GRAVY (calculated)

-0.401

Length

665 amino acids

Sequence
(BLAST)

001: MEMGSVVGLG DVNFSTEPKT PTPTMIFPKI EPKLEPLDEF TPQSMNPNSN FSYNSGFRNT TTPQQQQLNA TSSQTPSSIE AGVHSEYNRI SELFQTAFAQ
101: SVQRDGDVEA NEDLGCRAIV PVSNGSQVSD IVITRRKYEK RSSELVRVTD LKPEDVRYFR DLIRKTRMLY DSLRIFVNLE DENSQHLGSG RQTRARGDLK
201: ASQMMREHGL WLNRDKRTVG PIPGVLVGDL FLYRMELCVV GLHGTPQAGI DYLPANQSSN GEPIATSIIA SGGYEDDEDA GDVIIYTGQG GQDKNSRQVV
301: HQKLEGGNLA LERSMYYGVE VRVIRGFKYV GSSSGKVYVY DGLYRITESW FDVGKSGFGV YKYKLVRIEN QPDMGSAILR FAESLRTRPL EVRPMGYISL
401: DISRKKENVP VFLFNDIDNE RDPACYDYLL KTVFPPYVYQ HVGNGSGCEC TDGCGNGTNC FCAMKNGGQF AYDTNGILLR GKPIIFECGP HCSCPPTCLN
501: RVSQKGVRNR FEVFRSRETD WGVRSLDLLQ AGSFICEYTG VVLTQEQAQI FTMNGDSLIY PSHFAERWAE WGDLSRIDSN YARPAYPSIP PLDFAMDVSR
601: MRNLACYMSH SSSPNVLVQP VLYDHNNVSF PHLMLFAMEN IPPLRELSID YGMPDDCTGK LAICN

Best Arabidopsis Sequence Match ( AT4G13460.1 )
(BLAST)

001: MGSSHIPLDP SLNPSPSLIP KLEPVTESTQ NLAFQLPNTN PQALISSAVS DFNEATDFSS DYNTVAESAR SAFAQRLQRH DDVAVLDSLT GAIVPVEENP
101: EPEPNPYSTS DSSPSVATQR PRPQPRSSEL VRITDVGPES ERQFREHVRK TRMIYDSLRM FLMMEEAKRN GVGGRRARAD GKAGKAGSMM RDCMLWMNRD
201: KRIVGSIPGV QVGDIFFFRF ELCVMGLHGH PQSGIDFLTG SLSSNGEPIA TSVIVSGGYE DDDDQGDVIM YTGQGGQDRL GRQAEHQRLE GGNLAMERSM
301: YYGIEVRVIR GLKYENEVSS RVYVYDGLFR IVDSWFDVGK SGFGVFKYRL ERIEGQAEMG SSVLKFARTL KTNPLSVRPR GYINFDISNG KENVPVYLFN
401: DIDSDQEPLY YEYLAQTSFP PGLFVQQSGN ASGCDCVNGC GSGCLCEAKN SGEIAYDYNG TLIRQKPLIH ECGSACQCPP SCRNRVTQKG LRNRLEVFRS
501: LETGWGVRSL DVLHAGAFIC EYAGVALTRE QANILTMNGD TLVYPARFSS ARWEDWGDLS QVLADFERPS YPDIPPVDFA MDVSKMRNVA CYISHSTDPN
601: VIVQFVLHDH NSLMFPRVML FAAENIPPMT ELSLDYGVVD DWNAKLAICN

Arabidopsis Description

SUVH9Histone-lysine N-methyltransferase family member SUVH9 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0G7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.