Factsheet for TraesCS1A01G042900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G043400.1	Wheat	nucleus	96.59	97.5
TraesCS1B01G055800.1	Wheat	nucleus	93.5	94.23
HORVU1Hr1G008690.1	Barley	nucleus	84.98	90.89
Os08t0565700-01	Rice	nucleus	58.05	63.13
Zm00001d031858_P001	Maize	nucleus	61.92	61.35
TraesCS3A01G457800.1	Wheat	mitochondrion, nucleus	50.15	61.02
EES14036	Sorghum	nucleus	61.61	59.76
TraesCS4A01G100900.1	Wheat	nucleus	57.74	55.51
TraesCS3A01G457900.1	Wheat	plastid	46.13	55.08
TraesCS2A01G235400.1	Wheat	nucleus	42.57	41.04
TraesCS3A01G520700.1	Wheat	nucleus	13.16	29.51
TraesCS1A01G308300.1	Wheat	nucleus	30.03	28.78
TraesCS5A01G140500.1	Wheat	nucleus	30.19	28.59
TraesCS1A01G362000.1	Wheat	nucleus	29.26	27.96
TraesCS3A01G336100.1	Wheat	nucleus	29.1	25.23
TraesCS3A01G441200.1	Wheat	nucleus	26.47	24.78
TraesCS3A01G385200.1	Wheat	plastid	27.55	24.52
TraesCS4A01G023500.1	Wheat	nucleus	29.26	22.66
TraesCS3A01G295200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	11.46	22.29
TraesCS1A01G241600.2	Wheat	nucleus	26.78	21.12
TraesCS1A01G117300.1	Wheat	nucleus	26.32	17.95
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	24.77	15.87
TraesCS5A01G194500.1	Wheat	plastid	26.63	14.84
TraesCS2A01G478800.1	Wheat	nucleus	13.31	14.33
TraesCS2A01G382000.5	Wheat	nucleus	13.47	12.85
TraesCS5A01G197900.1	Wheat	nucleus	19.5	12.7
TraesCS6A01G226600.1	Wheat	nucleus	13.16	12.48
KRH67447	Soybean	nucleus	13.93	12.41
TraesCS2A01G478000.1	Wheat	mitochondrion, nucleus	13.78	11.95
TraesCS6A01G274600.1	Wheat	nucleus	16.25	6.43
KRH67444	Soybean	cytosol	0.0	0.0
CDY18235	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987
GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968
InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987
PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS51015
PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF328	InterPro:PUA-like_sf	InterPro:Pre-SET_dom	InterPro:SET_dom
SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199
SUPFAM:SSF88697	EnsemblPlantsGene:TraesCS1A01G042900	EnsemblPlants:TraesCS1A01G042900.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr1A:+:23816232..23818172

Molecular Weight (calculated)

70967.1 Da

IEP (calculated)

6.428

GRAVY (calculated)

-0.397

Length

646 amino acids

Sequence
(BLAST)

001: MASSPPPPPP PQPLPTQIPL TPKPDPDAPQ SPSTVPSTAL IPKLEPIALT PELCDLYRRE LEPSPDGHPD FAGHLHFTQQ QIDAVPADRR LVVSNPQPEP
101: SPQGSIPPAH SDTSVSSSSS TAKKRARGGE MVRVNTVTPQ DHIHFRSLVR RARLTFEALR GIYQREESYD GGPRNRFDLR ASSKMLSRGL WLYRDVRIVG
201: PIPGVLVGDA FHYRAELCVV GLHCTPQAGI GYIPASLVSE GHPVATSIVS SGGYLDDEDN GQVLVYSGSG GRQRNRVEHH ADQTLERGNL ALHYSCHYGV
301: EVRVIRCHAC DSSPSRKVYV YDGLYKAVSS TYEPGKSGRH VCKYTLVRIP GQEELGSSNW CLAKDIKDKL LANQALPPGY ISPDLSNGRE VLRVPVFNGV
401: DHESSLLDFD YIARPEFPLP LVKQQHWGCH CVTSPCGPEC GCVIKNGGGG PVYNEDGTLV RGRPVVYECG ALCGCPMSCA NRATQRGMKH TLEVFRSMET
501: EWGVRTLDLI QPGAFVCEYS GDVVVTTGEC ELAMDEGSII DPKRFPKRWS EWGDASPALV GDDDDKVPRP QFPHFQEPGY VLDVSRRRNL ASYISHSCTP
601: NVFVQYVVRG GENESCPHLM VFAMDAIPPM RELSIDYGMD DQQICA

Best Arabidopsis Sequence Match ( AT4G13460.1 )
(BLAST)

001: MGSSHIPLDP SLNPSPSLIP KLEPVTESTQ NLAFQLPNTN PQALISSAVS DFNEATDFSS DYNTVAESAR SAFAQRLQRH DDVAVLDSLT GAIVPVEENP
101: EPEPNPYSTS DSSPSVATQR PRPQPRSSEL VRITDVGPES ERQFREHVRK TRMIYDSLRM FLMMEEAKRN GVGGRRARAD GKAGKAGSMM RDCMLWMNRD
201: KRIVGSIPGV QVGDIFFFRF ELCVMGLHGH PQSGIDFLTG SLSSNGEPIA TSVIVSGGYE DDDDQGDVIM YTGQGGQDRL GRQAEHQRLE GGNLAMERSM
301: YYGIEVRVIR GLKYENEVSS RVYVYDGLFR IVDSWFDVGK SGFGVFKYRL ERIEGQAEMG SSVLKFARTL KTNPLSVRPR GYINFDISNG KENVPVYLFN
401: DIDSDQEPLY YEYLAQTSFP PGLFVQQSGN ASGCDCVNGC GSGCLCEAKN SGEIAYDYNG TLIRQKPLIH ECGSACQCPP SCRNRVTQKG LRNRLEVFRS
501: LETGWGVRSL DVLHAGAFIC EYAGVALTRE QANILTMNGD TLVYPARFSS ARWEDWGDLS QVLADFERPS YPDIPPVDFA MDVSKMRNVA CYISHSTDPN
601: VIVQFVLHDH NSLMFPRVML FAAENIPPMT ELSLDYGVVD DWNAKLAICN

Arabidopsis Description

SUVH9Histone-lysine N-methyltransferase family member SUVH9 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0G7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.