Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
No Homology Data
Protein Annotations
| MapMan:15.5.32 | Gene3D:3.30.450.40 | Gene3D:4.10.280.10 | InterPro:GAF-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR029016 | InterPro:IPR036638 |
| InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF93 |
| SMART:SM00353 | SUPFAM:SSF47459 | EnsemblPlantsGene:TraesCS1A01G102400 | EnsemblPlants:TraesCS1A01G102400.1 | InterPro:bHLH_dom | TIGR:cd00083 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:98584808..98591571
Molecular Weight (calculated)
68338.3 Da
IEP (calculated)
5.900
GRAVY (calculated)
-0.426
Length
624 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSGEVQRS LQAVAQGLRW TYALLWQLCP DQGALVWAEG HYNGAIKTRK TVQPAVAQAQ VPAPAAEAAD QARSRQLREL FDSLAREAAA GGGTGFRDVH
101: GCAQEARRPS AALAPEDLTE TEWFYLMSAS YSFPPGVGLP GRAFARGGHV WLSRANEVDS KAFSRAILAR SAGIKTVVCI PIVDGVLEIG TTEKVEEDMG
201: LVQYAMAIFM DQQETHMISS ICHSNQTSHI DQQSFQTQRK TPTGQPKPEP NKFNPEYEDD EMEYDDDEID AECASGSASH DDHTTHNAGS SELMQVETSE
301: RVRDGCSSNF GDEIQMLMVC QNSTDDHSNL HGQNEAWHFL YEELCSGYPQ SSGENQAMAE NAHYAQTLSL ILHRNNALRQ GGGLNTGSYL AVSLQSSFSR
401: WDAGIHGRTV AQGTTRQKML KSVLLFFSAA CNKPPGDPRC DDAGARREVD FGASHVMQER KRREKLNERF IVLRSLVPFV TKMDKASILG DTIEYVKQLT
501: KRIQDLESST VRGPAMSKEK RALPTGMEGA SSSSGSTPVA TDVQVSIIES DALLELRCPD THGLLVTIMQ TLQEQLRLEV TSVQASSDHG VLLAELRAKV
601: REVHGRRSSI SQVKRAIHLI ISSG
101: GCAQEARRPS AALAPEDLTE TEWFYLMSAS YSFPPGVGLP GRAFARGGHV WLSRANEVDS KAFSRAILAR SAGIKTVVCI PIVDGVLEIG TTEKVEEDMG
201: LVQYAMAIFM DQQETHMISS ICHSNQTSHI DQQSFQTQRK TPTGQPKPEP NKFNPEYEDD EMEYDDDEID AECASGSASH DDHTTHNAGS SELMQVETSE
301: RVRDGCSSNF GDEIQMLMVC QNSTDDHSNL HGQNEAWHFL YEELCSGYPQ SSGENQAMAE NAHYAQTLSL ILHRNNALRQ GGGLNTGSYL AVSLQSSFSR
401: WDAGIHGRTV AQGTTRQKML KSVLLFFSAA CNKPPGDPRC DDAGARREVD FGASHVMQER KRREKLNERF IVLRSLVPFV TKMDKASILG DTIEYVKQLT
501: KRIQDLESST VRGPAMSKEK RALPTGMEGA SSSSGSTPVA TDVQVSIIES DALLELRCPD THGLLVTIMQ TLQEQLRLEV TSVQASSDHG VLLAELRAKV
601: REVHGRRSSI SQVKRAIHLI ISSG
001: MDESSIIPAE KVAGAEKKEL QGLLKTAVQS VDWTYSVFWQ FCPQQRVLVW GNGYYNGAIK TRKTTQPAEV TAEEAALERS QQLRELYETL LAGESTSEAR
101: ACTALSPEDL TETEWFYLMC VSFSFPPPSG MPGKAYARRK HVWLSGANEV DSKTFSRAIL AKSAKIQTVV CIPMLDGVVE LGTTKKVRED VEFVELTKSF
201: FYDHCKTNPK PALSEHSTYE VHEEAEDEEE VEEEMTMSEE MRLGSPDDED VSNQNLHSDL HIESTHTLDT HMDMMNLMEE GGNYSQTVTT LLMSHPTSLL
301: SDSVSTSSYI QSSFATWRVE NGKEHQQVKT APSSQWVLKQ MIFRVPFLHD NTKDKRLPRE DLSHVVAERR RREKLNEKFI TLRSMVPFVT KMDKVSILGD
401: TIAYVNHLRK RVHELENTHH EQQHKRTRTC KRKTSEEVEV SIIENDVLLE MRCEYRDGLL LDILQVLHEL GIETTAVHTS VNDHDFEAEI RAKVRGKKAS
501: IAEVKRAIHQ VIIHDTNL
101: ACTALSPEDL TETEWFYLMC VSFSFPPPSG MPGKAYARRK HVWLSGANEV DSKTFSRAIL AKSAKIQTVV CIPMLDGVVE LGTTKKVRED VEFVELTKSF
201: FYDHCKTNPK PALSEHSTYE VHEEAEDEEE VEEEMTMSEE MRLGSPDDED VSNQNLHSDL HIESTHTLDT HMDMMNLMEE GGNYSQTVTT LLMSHPTSLL
301: SDSVSTSSYI QSSFATWRVE NGKEHQQVKT APSSQWVLKQ MIFRVPFLHD NTKDKRLPRE DLSHVVAERR RREKLNEKFI TLRSMVPFVT KMDKVSILGD
401: TIAYVNHLRK RVHELENTHH EQQHKRTRTC KRKTSEEVEV SIIENDVLLE MRCEYRDGLL LDILQVLHEL GIETTAVHTS VNDHDFEAEI RAKVRGKKAS
501: IAEVKRAIHQ VIIHDTNL
Arabidopsis Description
TT8Transcription factor TT8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FT81]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.