Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G139900.1 | Wheat | plastid | 97.54 | 96.59 |
| HORVU1Hr1G037060.2 | Barley | cytosol, plasma membrane, plastid | 88.67 | 81.82 |
| Zm00001d030537_P001 | Maize | cytosol, nucleus, plastid | 55.17 | 56.85 |
| Os10t0378450-00 | Rice | plastid | 46.31 | 48.21 |
| TraesCS2A01G165100.1 | Wheat | cytosol | 33.0 | 17.14 |
| TraesCS4A01G160900.1 | Wheat | cytosol | 32.02 | 16.25 |
| TraesCS5A01G245400.1 | Wheat | cytosol, nucleus, plastid | 20.2 | 7.77 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G141000.1 | EnsemblPlantsGene:TraesCS1A01G141000 | ncoils:Coil | PANTHER:PTHR45496 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr1A:-:238869848..238870506
Molecular Weight (calculated)
21815.5 Da
IEP (calculated)
4.579
GRAVY (calculated)
-0.312
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHFAGPSAS ASADEAFWTA CPHCCYTHSY PRLYVGRRLR CPTATCRRVF SADELPSTPP IVPGADMYFC TWAFFPLGPT AVAEGWAPFT PFNPAPPPSP
101: SPVPNPTAAT PACAVPTRVR PTSRKKVGVC LKGRARVEAE EEEEEEEEKA STVANLKAGE EVQADWLTLG DNGGSSGINI NETVDLSELG FRVDESGFLQ
201: EIP
101: SPVPNPTAAT PACAVPTRVR PTSRKKVGVC LKGRARVEAE EEEEEEEEKA STVANLKAGE EVQADWLTLG DNGGSSGINI NETVDLSELG FRVDESGFLQ
201: EIP
001: MLGFQLFNQT PQSQSQSPQH HQQQSQSPQH PNQNQTVSFQ NQQLPFQLHQ PHFAQAVQTQ SQSQQQRSQF DQQLLQEQQQ ASWRQQVGQE HSSGSSGDWK
101: RPVEEVRLIN LNNATERVQS SRRFAEPERP PSRSFEGSSH RTPSTELTWA SKPTPVSEPV RHSELVPWQY SEPARQYQLS SRSSEAAQLS LLPSVSDSSH
201: ASQPTRSNQS HAVSKPQPVS KPHPPFPMSQ PPPTSNPFPL SQPPSNSKPF PMSQSSQNSK PFPVSQSSQK SKPLLVSQSS QRSKPLPVSQ SLQNSNPFPV
301: SQPSSNSKPF PVSQPQPASN PFPVSQPRPN SQPFSMSQPS STARPFPASQ PPAASKSFPI SQPPTTSKPF VSQPPNTSKP MPVSQPPTTS KPLPVSQPPP
401: TFQSTCPSQP PAASSSLSPL PPVFNSTQSF QSPPVSTTPS AVPEASTIPS PPAPAPVAQP THVFNQTPPP EQTPKSGAAR TDSEPEVSSF WTTCPYCYVL
501: YEYPIIYEES VLKCQTKSCR RAYQAVKVPS PPPVAEEDSY YCCWGFYPIG FSEVVTKIPV TGLHTKIPVS DLPKSAPKKP SPKVYYYDDE EEDDDSYIGS
601: DPSEDDDDDD WLMNGTKRRK NVKQSKAKAT TKPKRQKVIE VD
101: RPVEEVRLIN LNNATERVQS SRRFAEPERP PSRSFEGSSH RTPSTELTWA SKPTPVSEPV RHSELVPWQY SEPARQYQLS SRSSEAAQLS LLPSVSDSSH
201: ASQPTRSNQS HAVSKPQPVS KPHPPFPMSQ PPPTSNPFPL SQPPSNSKPF PMSQSSQNSK PFPVSQSSQK SKPLLVSQSS QRSKPLPVSQ SLQNSNPFPV
301: SQPSSNSKPF PVSQPQPASN PFPVSQPRPN SQPFSMSQPS STARPFPASQ PPAASKSFPI SQPPTTSKPF VSQPPNTSKP MPVSQPPTTS KPLPVSQPPP
401: TFQSTCPSQP PAASSSLSPL PPVFNSTQSF QSPPVSTTPS AVPEASTIPS PPAPAPVAQP THVFNQTPPP EQTPKSGAAR TDSEPEVSSF WTTCPYCYVL
501: YEYPIIYEES VLKCQTKSCR RAYQAVKVPS PPPVAEEDSY YCCWGFYPIG FSEVVTKIPV TGLHTKIPVS DLPKSAPKKP SPKVYYYDDE EEDDDSYIGS
601: DPSEDDDDDD WLMNGTKRRK NVKQSKAKAT TKPKRQKVIE VD
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WQM3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.