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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • plastid 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, mitochondrion, plasma membrane, plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:plastid
golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G208100.1 Wheat cytosol 99.11 99.15
TraesCS1D01G197000.1 Wheat cytosol 98.95 98.95
HORVU1Hr1G050580.1 Barley cytosol 98.1 98.1
Os10t0575200-01 Rice plasma membrane 59.76 91.02
EER94441 Sorghum cytosol 88.51 88.62
Zm00001d030026_P004 Maize cytosol 87.35 87.45
Zm00001d047015_P022 Maize cytosol 85.45 85.85
VIT_00s0214g00010.t01 Wine grape cytosol 2.95 81.72
GSMUA_Achr11P... Banana cytosol 71.71 76.33
VIT_11s0016g04420.t01 Wine grape cytosol 75.13 74.2
Solyc08g021910.1.1 Tomato nucleus, plastid 57.82 72.51
KRH56679 Soybean endoplasmic reticulum 72.68 72.34
Solyc08g021920.2.1 Tomato cytosol, nucleus, plastid 3.03 72.22
KRH03795 Soybean cytosol 72.33 72.16
CDY69866 Canola cytosol 24.8 71.72
PGSC0003DMT400036235 Potato cytosol, nucleus, peroxisome 71.48 71.23
AT2G26890.1 Thale cress cytosol 69.93 70.56
Bra012041.1-P Field mustard cytosol 69.46 70.22
CDY04468 Canola cytosol 69.38 69.82
CDX71484 Canola cytosol 69.31 69.63
Protein Annotations
Gene3D:1.10.287.110Gene3D:1.25.10.10MapMan:35.1InterPro:ARM-likeInterPro:ARM-type_foldncoils:Coil
InterPro:DUF4339InterPro:DnaJ_domainGO:GO:0003674GO:GO:0005488InterPro:IPR001623InterPro:IPR011989
InterPro:IPR036869InterPro:J_dom_sfPFAM:PF00226PFAM:PF14237PFscan:PS50076PANTHER:PTHR36983
SMART:SM00271SUPFAM:SSF46565SUPFAM:SSF48371EnsemblPlantsGene:TraesCS1A01G193300EnsemblPlants:TraesCS1A01G193300.1TIGR:cd06257
SEG:seg:::::
Description
No Description!
Coordinates
chr1A:-:349997939..350018147
Molecular Weight (calculated)
281342.0 Da
IEP (calculated)
6.207
GRAVY (calculated)
-0.096
Length
2577 amino acids
Sequence
(BLAST)
0001: MDFASRHTAS APSANAGADA SSSAVTEEPE YLARYFVVKH SWRGRYRRIL CIAASGVVTL DPTTLAVTNS YDFAADFDRA APDPNAAAEF SLSVRSDGKG
0101: KFKAMRFSSP LRAGILTELH RLRPVHPVVE FPVLHLRRRT QEWAPFKIKV TSLGIELLEV HSGNLRWCLD FRDMDSPAIL LLGDNYGRRS AEGGGFVLCP
0201: LYGRKSKAFM AASGSTNTLI ISSLTKTAKS AIGLSLSVDN SQSMTAADFI ARRANEAVGA AETRHGEWSV IRLRPAAHGT ACIESLSLGV GPRGGLGEQG
0301: DSVSRQLVLT NTSLVERRPE NYEATIVRPL SAVSALVRFA EEPQMFAFEF NDGCPIHVYA STSRDNLIAT VVDVLQTQRQ CAIPVLPRLT MPGHRIDPPC
0401: GVAHLQIPHN ATVDMEAANM YVKHLAVVAK EAVASSDTVP GAKIRLWRRI REFNACIPYT GVPINIEVPE VVLMALISLL PATPQNLPAD APPLPPPSPK
0501: AAATIMGFVA CLRRLLTSRS VSSHVMAFPV AVGRIMGLLR NGSEGVAAEA AGLVAMLIGG GPGDTSMLMD TRGESHATYM HAKSVLFAQP IYVPVLVSRL
0601: KPLSVSPLLS LSVVEILEAM LCDPHGETTQ HATFVELLRQ VAGLRRRLFA LFAHPAESVR ETISVIMRTI AEEDAIAAES MRDAALKDGA LLRHLLNAFF
0701: FPAGERRDVS RQLVALWADS YQPALDLLSR ILPPGLVAYL HTRSDEDSQN QYDEVPLSRR QKRILQQRRA LGGKNMETPE QGMPPNSVDD GDFFRHTSVG
0801: PYGGADVNQR HVGQYSTAHT PSPATSIDPS HAVPHGAVPQ SVSENHQLGT PQLDSHTYSV DPTANGDLIE SSHSDFSVPA QIVVENTPVG SGRLLCNWFG
0901: FWRAFGLDHN RADLIWNERT RQELREALQT EVHNLDVEKE RTDDIDPGSS VSEDDGGSDT LPRISWNYAE FFVSYPSLSK EVCVGQYYLR LLLESGSNYR
1001: AQDFPLRDPV AFFRALYHRF LCDADVGLTV DGAVPDELGS SDDWCDMGRL DGFGGGGGSS VRELCSRAMA IVYEQHYKVI GPFDGTAHIT VLLDRTDDRA
1101: LRHRLLLLLK AFMNDLSNVE ACVLVGGCVL AVDLLTVAHE ASERTAIPLQ SNLIASTAFM EPSKEWMYID NDGTKVGPLE KDAIRRLWSK KSIDWTTKCW
1201: ASSMSDWKRL RDIRELRWAL SVRTPVLTST QIADAALSIL HSMASAHSDL DDAGEIVTPT PRVKRILSSP RCLPHVAQAM LTGEPSIVEV SASLLKAIVT
1301: RNPKAMIRLY STGAFYFALA YPGSNLLSIA QLFSATHTHQ AFHGGEEAAV SSSLPLAKRS VLGGLLPESL LYVLERSGPS AFAAAMVSDS DTPEIIWTHK
1401: MRAEHLIRQV LQHLGDFSQK LAQHCHSLYD YAPMPPVTYP NLKDEMWCHR YYLRNLCDEI RFPNWPIVEH VEFLQSLLAM WREELTRRPM DLSEEEACKI
1501: LEITLDDLVI GEKGSSKKSS ELNLASLAKN IENIDEEKLK RQYRKLAIKY HPDKNPEGRE KFVAVQKAYE RLQASMQGLQ GPQLWRLILL LKAQCILYKR
1601: YGHVLEPFKY AGYPMLLNAV TVDKDDSNFL SSDRAPLLIA ASELIWLTCS SSSLNGEELI RDSGIPLLAT LLSRCMCIVQ PTTPAHEPAA KIVTNIMHTF
1701: SALSLFESGR VEILKFAGLV EDIVHCTELE FVPSAVDAAL QTAANVSVSS ELQNALLAAG FLWFVLPLLL QYDSTAEENE TNESHGVGAR VQIAKNLHAV
1801: HAAQALSKLC GLGGDGTSSP SNLPAFNTLR ALLTPKLADM LRNRPPKDLL SNLNSNLESP EIIWNSSTRG ELLKFVDQQR TSQGPDGSYD LTESQSFNYE
1901: ALSKELNVGD VYLRVYNNQP DYEISDQEGF CIALLKFIAG LVQKWSSINS EENMTHEHDS VIDTSTENGG ASDSTNEGKE DNSFEKGSKY ETGGDCEVIT
2001: NLRSGLTSLQ NLLTSNPGLA AVFASKERLT PLFECLALPV PPESNIPQIC LSVLSLLTKH APCLEAMVAE RTSLILLFQI LHCNPSCRDG ALAVLYSLAS
2101: TPELAWAAAK HGGVVYILEL MLPLQEEIPM QQRAAAASLL GKLAGQPMHG PRVAITLARF LPDGLVSAIR DGPGEAVVSS LEQTTETPEL VWTPAMAASL
2201: SAQLSTMAAD LYQEQMKGRL VDWDVPEQAS GQHVMKDEPQ VGGIYVRLFL KDPKFPLRNP KRFLEGLLDQ YVSSVAATHY EANAVDPELP LLLSAALVSL
2301: LRVHPALADH VGYLGYVPKL VAAMAYEGRR ETMASGQDTS RVQAEPIEHD NSDGVPETTV QTPQERVRLS CLRVLHQLAS STTCAEAMAA TSAGTPQVVA
2401: LLMKAIGWQG GSILALETLK RVVGAGNRAR DALVAQGLKV GLVDVLLGIL DWRAGGRQGL CNQMKWNESE ASIGRVLAVE VLHAFATEGA HCAKVREILN
2501: SSDVWSAYKD QKHDLFLPSN AQTSAAGVAG LIESSSSRLT YALTAAPSPQ PALVRLPSSS PPPPTGPVNP ASGRRHS
Best Arabidopsis Sequence Match ( AT2G26890.1 )
(BLAST)
0001: MDSVSRGAVA STTGGAVEEP EYLARYLVVK HSWRGRYKRI LCISSGGIVT LDPNTLAVTN SYDTGSNFDG ASPLVGRDEN TESVGGEFTV NVRTDGKGKF
0101: KAMKFSSRCR ASILTELYRL RWNQIRPVAE FQVLHLRRRN AEWVPYKLKI TFVGLELVDS KSGNSRWILD FRDMGSPAII LLSDAYRTKS ADSAGFVLCP
0201: MYGRKSKAFR AAPGTTNSSI VASLAKTAKS MVGVFLSVDD SQLLTVSEYM TRRAKEAVGA EETPNGWWSV TRLRSAAHGT LNMPGLSLAI GPKGGLGEHG
0301: DAVALQLILT KASLVERRID NYEVVIVRPL SSVSSLVRFA EEPQMFAIEF SDGCPVLVYA SISRDNLLAA ILDTLQTEGH CPIPVLPRLT MPGHRIDPPC
0401: GRVSLISGPQ HLVADLETCS LHLKHLAAAA KDAVAEGGSV PGCRARLWRR IREFNACIPY TGVPANSEVP EVTLMALITM LPSTPNLPVD APPLPPPSPK
0501: AAATVIGFVT CLRRLLSSRS AASHIMSFPA AVNRIMGLLR NGSEGVAAEA AGLIASLIGG WSADLSTAPD SRGEKHATIM HTKSVLFAQQ GYVTILVNRL
0601: KPMSVSPLFS MAIVEVFEAM VCDPHGETTQ YTVFVELLRQ IAALRRRLFA LFAHPAESVR ETIAVIMRTI AEEDAIAAES MRDAALRDGA LLRHLLNAFS
0701: LPASERREVS RQLVALWADS YQPALDLLSR VLPPGLVAYL HTRPDDVVDD TDQEGSSTNR RQKRLLQQRR GRIAKGMGAQ DIPLPPGNNV EAGDAAKHMS
0801: ANASVPDNFQ RRAADSSSEA SNPQASAFPG VDSTIAGVSQ NGYPAFASVT TNANGHEQPE TNASDVVGSD PNLYGIQNSV LPAPAQVIVE STAVGSGKLL
0901: LNWREFWRAF GLDHNRADLI WNERTRQELI EALKAEVHNL DVEKERTEDI SPGDVEATTG QEIIPRISWN YSEFSVSYRS LSKEVCVGQY YLRLLLESGN
1001: AGKAQDFPLR DPVAFFRALY HRFQCDADMG LTIDGAVPDE LGSSGDWCDM SRLDGFGGGG GASVRELCAR AMAIVYEQHY NTIGPFEGTA HITALIDRTN
1101: DRALRHRLLL LLKALVKVLL NVEGCVVVGG CVLAVDLLTV VHENSERTPI PLQSNLIAAT AFMEPPKEWM YIDKGGAEVG PVEKDVIRSL WSKKDIDWTT
1201: KCRALGMSDW KKLRDIRELR WAVAVRVPVL TPSQVGDAAL SILHSMVSAH SDLDDAGEIV TPTPRVKRIL SSTRCLPHIA QALLSGEPVI VEAGAALLKD
1301: VVTRNSKAMI RLYSTGAFYF ALAYPGSNLY SIAQLFSVTH VHQAFHGGEE ATVSSSLPLA KRSVLGGLLP ESLLYVLERS GPAAFAAGMV SDSDTPEIIW
1401: THKMRAENLI CQVLQHLGDY PQKLSQHCHS LYDYAPMPPV TYPELRDEMW CHRYYLRNLC DEIQFPNWPI VEHVEFLQSL LVMWREELTR KPMDLSEGEA
1501: CKILEISLNN VSSDDLNRTA SVELNEEISN ISKQIQNLDE EKLKRQYRKL AMRYHPDKNP EGREKFLAVQ KAYECLQATM QGLQGPQPWR LLLLLKAQCI
1601: LYRRYGHVLR PFKYAGYPML LDAVTVDKDD NNFLSNDRSP LLVAASELVS LTCAASSLNG EELVRDGGVQ LLSTLLSRCM CVVQPTTSQH EPAAIIVTNV
1701: MRTLSVISQF ESARAGFLEL PSLIEDIVHC TELERVPAAV DAALQSIAKV SVFPELQHGL LKAGALWYIL PLLLQYDSTA EESNSVESHG VGVSIQIAKN
1801: EHALQASQAL SRLTGLCADE SLTPYNATAA DVLKALLTPK LASLLKDEVA KDLLSKLNTN LETPEIIWNS ATRSELLNFV DEQRACQCPD GSYDLKNAQS
1901: FSYDALSKEV FVGNVYLKVY NDQPDSEISE PESFCNALID FISSLVHTEL PSVSEDQNLI EDRNSSNDTP ELQSSVAEPS LIEEHSDHQP SSEGMKNEEC
2001: FLIDHLQLGL TALQNLLTKY PDLASVFSSK ERLLPLFECF SVAIASKTDI PKLCLNVLSR LTAYAPCLET MVSDGSSLLL LLQMLHSAPS FREGALHVLY
2101: ALASTPELAW AAAKHGGVVY ILELLLPLQK EIPLQQRAAA ASLLGKLVAQ PMHGPRVAIT LVRFLPDGLV SIIRDGPGEA VVHALERTTE TPELVWTPAM
2201: AASLSAQIAT MASDIYREQQ KGSVIEWDVP EQSAGQQEMR DEPQVGGIYV RRFLKDPKFP LRNPKRFLEG LLDQYLSAMA ATHYEQHPVD PELPLLLSAA
2301: LVSLLRVHPA LADHIGHLGY VPKLVAAVAY EGRRETMSSG EVKAEEIGSD GVNESTDPSS LPGQTPQERV RLSCLRVLHQ LAASTTCAEA MAATSAGNAQ
2401: VVPLLMKAIG WLGGSILALE TLKRVVVAGN RARDALVAQG LKVGLIEVLL GLLDWRTGGR YGLSSHMKWN ESEASIGRVL AVEVLHGFAT EGAHCSKVRE
2501: ILDASEVWSA YKDQKHDLFL PSNTQSAAGV AGFIENSSNS LTYALTAPPP PSHP
Arabidopsis Description
GRV2DnaJ homolog subfamily C GRV2 [Source:UniProtKB/Swiss-Prot;Acc:F4IVL6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.