Factsheet for TraesCS1A01G241600.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G241500.1	Wheat	nucleus	96.09	96.09
OQU77925	Sorghum	nucleus	61.66	66.98
GSMUA_Achr8P00500_001	Banana	extracellular	20.88	62.64
TraesCS3A01G441200.1	Wheat	nucleus	52.26	62.03
VIT_14s0068g01090.t01	Wine grape	nucleus	37.73	58.86
KRG94709	Soybean	nucleus	19.9	54.15
GSMUA_Achr8P00490_001	Banana	nucleus	22.59	51.1
Solyc02g094520.2.1	Tomato	nucleus	41.27	49.93
Bra006226.1-P	Field mustard	nucleus	36.39	49.83
CDX78549	Canola	nucleus	36.51	49.5
CDX70530	Canola	nucleus	36.39	49.42
KRH20251	Soybean	nucleus, plastid	38.83	48.04
AT5G13960.1	Thale cress	nucleus	36.14	47.44
KRH06819	Soybean	nucleus	40.9	46.53
TraesCS3A01G520700.1	Wheat	nucleus	13.43	38.19
TraesCS3A01G457800.1	Wheat	mitochondrion, nucleus	20.27	31.26
TraesCS3A01G457900.1	Wheat	plastid	18.8	28.47
TraesCS1A01G308300.1	Wheat	nucleus	23.2	28.19
TraesCS1A01G362000.1	Wheat	nucleus	22.95	27.81
TraesCS5A01G140500.1	Wheat	nucleus	22.34	26.83
TraesCS1A01G042900.1	Wheat	nucleus	21.12	26.78
TraesCS2A01G235400.1	Wheat	nucleus	21.86	26.72
TraesCS4A01G100900.1	Wheat	nucleus	21.49	26.19
TraesCS3A01G336100.1	Wheat	nucleus	23.32	25.64
TraesCS3A01G295200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	10.38	25.6
TraesCS3A01G385200.1	Wheat	plastid	21.61	24.38
TraesCS4A01G023500.1	Wheat	nucleus	23.2	22.78
TraesCS1A01G117300.1	Wheat	nucleus	24.66	21.33
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	22.83	18.55
TraesCS5A01G194500.1	Wheat	plastid	24.91	17.6
TraesCS2A01G478800.1	Wheat	nucleus	11.48	15.67
TraesCS2A01G382000.5	Wheat	nucleus	12.58	15.21
TraesCS6A01G226600.1	Wheat	nucleus	12.33	14.83
TraesCS5A01G197900.1	Wheat	nucleus	17.09	14.11
TraesCS2A01G478000.1	Wheat	mitochondrion, nucleus	11.36	12.48
TraesCS6A01G274600.1	Wheat	nucleus	15.14	7.6

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.30.280.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016571
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214
InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	PFAM:PF00856
PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015
PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF390	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom
InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	SMART:SM00508	InterPro:SRA-YDG_sf
InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	EnsemblPlantsGene:TraesCS1A01G241600	EnsemblPlants:TraesCS1A01G241600.2	SEG:seg

Description

No Description!

Coordinates

chr1A:-:429485883..429498470

Molecular Weight (calculated)

90771.8 Da

IEP (calculated)

7.529

GRAVY (calculated)

-0.553

Length

819 amino acids

Sequence
(BLAST)

001: MEVPGFADSP CRPRSARYAV KGYPNYAEEP DFCGPATPCR PRTARHARKG CLDYAVPPDA RAVHAPCRPR SARDADKGCL DYAELPDVRS SAAPCRPRSA
101: RYAEKGYPDY AEPDDFTDPA PRRPRSAPHT EKGCPDDAGS VGRLGHKRDE GGVPVKKPVL HYVRRKQREA AKAAETAVDM LVPLLQGMEV ESDAVALDGR
201: KRRRTVTAPM ATAMTACEVL ALPKDNEEVA PVDGGADEHG GGGKSWRLRV KETLRAFSSN YLHFVQEEQQ REQAVRQELK ASRALKRQTN NQDDEDFEEV
301: KRPSKRPDLK ALTKMQATNA VLYPEKRIGH LPGVDVGDQF YSRAEMVVLG IHGHWMKGID YIGSKHQDKP GYQDLIFPLA TCIVMSGAYE DDFDKADEII
401: YTGEGGNNLL GNGHQKTEQT LLRGNLALKN SKDNGNPIRV IRGHIEKNSY TGKVYTYDGL YKVVDCLSEK GVRGHLVFKF RLKRLEGQPP LTTSRVLFNR
501: GDVHMPISEL PGLVCRDISY GQENIPIPAT NLVDDPPVPP SGFVYSKSLQ IPEYIKMPAD SMGCNCKGDC SSSTHCLCAD RNGSDLPYVS TQKKVRAKHL
601: DSTHKNVGRL VEPKAVVFEC GANCSCHCSC VNRTSQQGLQ YRLEVFKTEL KGWSVRTWDT ILPGALICEY TGVLRRNAEV EGLLDNNYIF DIDCLQTIKG
701: LDGRKQRSGS ELHMASLQDE HDLEASQAPE YCIDAGSIGN IARFINHSCQ PNLFIQCVLS SHRDIKLAKI MLVAADTIPP LQELSYDYGY GMDSVIDPDG
801: NVVKLACHCG ASDCRKWLY

Best Arabidopsis Sequence Match ( AT5G13960.1 )
(BLAST)

001: MAGKRKRANA PDQTERRSSV RVQKVRQKAL DEKARLVQER VKLLSDRKSE ICVDDTELHE KEEENVDGSP KRRSPPKLTA MQKGKQKLSV SLNGKDVNLE
101: PHLKVTKCLR LFNKQYLLCV QAKLSRPDLK GVTEMIKAKA ILYPRKIIGD LPGIDVGHRF FSRAEMCAVG FHNHWLNGID YMSMEYEKEY SNYKLPLAVS
201: IVMSGQYEDD LDNADTVTYT GQGGHNLTGN KRQIKDQLLE RGNLALKHCC EYNVPVRVTR GHNCKSSYTK RVYTYDGLYK VEKFWAQKGV SGFTVYKYRL
301: KRLEGQPELT TDQVNFVAGR IPTSTSEIEG LVCEDISGGL EFKGIPATNR VDDSPVSPTS GFTYIKSLII EPNVIIPKSS TGCNCRGSCT DSKKCACAKL
401: NGGNFPYVDL NDGRLIESRD VVFECGPHCG CGPKCVNRTS QKRLRFNLEV FRSAKKGWAV RSWEYIPAGS PVCEYIGVVR RTADVDTISD NEYIFEIDCQ
501: QTMQGLGGRQ RRLRDVAVPM NNGVSQSSED ENAPEFCIDA GSTGNFARFI NHSCEPNLFV QCVLSSHQDI RLARVVLFAA DNISPMQELT YDYGYALDSV
601: HGPDGKVKQL ACYCGALNCR KRLY

Arabidopsis Description

SUVH4Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZB6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.