Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
No Homology Data
Protein Annotations
| Gene3D:1.20.58.1880 | MapMan:15.4.3.2 | MapMan:15.5.2.2 | GO:GO:0000126 | GO:GO:0001026 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006383 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017884 | PFAM:PF15963 | PFscan:PS51293 | PANTHER:PTHR22929 |
| InterPro:SANT/Myb | InterPro:SANT_dom | SMART:SM00717 | SUPFAM:SSF46689 | InterPro:TFIIIB_B'' | EnsemblPlantsGene:TraesCS1A01G314400 |
| EnsemblPlants:TraesCS1A01G314400.1 | TIGR:cd00167 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1A:-:506282215..506285655
Molecular Weight (calculated)
87107.3 Da
IEP (calculated)
4.754
GRAVY (calculated)
-1.041
Length
787 amino acids
Sequence
(BLAST)
(BLAST)
001: MIDDEANFGD ITDAPAEAEA AAKFHPNKLR GKLRKKSVPS RSVVPNRTVE TSDEKALALS QDNLSQGLAT NQEIASSAVH GSETIGGAEV CGGTIYTPSD
101: DVLAVSSVDR VSQNDDPHDD PSEVVTLQES LVVSDTQASS THPTSKTVDD LADFGELFDT HSEEENAAKS KLKIKVKLSK AASKSRKTGQ KKAASTVDVV
201: SQNKEDGNDD VRGCNDEQVQ AQHEEHVQTS DSQPPLGTDD GTVDNFVNHN RILEEPGPEE TAAKLCPKSQ RKPGRASSKA VGTSDDYAAA NLKDINASVD
301: IDSQDGLINP HTDDTQPIFG EPSAEAAATF LLDLGKKKSK GKSVTFVLPD DYEGVAATDT NHNDIGSDEN LNTLPQQAPQ KHCLTEEHSD DQEYTDRESQ
401: YYEGERSDHG VEQQSKLDVG KQELSMKLRS RTEIQKVGLS EHIVDDHLDE DFVEPSAAEQ NNDSSDENTA GGKQKAPRKS RKKDPNKEPL RGSKRTSTKS
501: TSEKSQPNQQ KNKSEVSSRG CKRALKDTMT EQPEKNLTHR IRQKRAQEVQ TLLQKPDHEI DRMKLSVTHL RLLQEARERI QSKTPSGPSS SNQSSRFGDT
601: DDFDPFGDNY DNDRTENQAL ESATKLNYHS YMDKKTRAKW TKSDTDLFYQ GLQQFGSDFA MIQQLFPDKS RDQVRQKFKS EDKKHPMQVH DAILHRSRDN
701: LYLKQVMKQL NIEDSLKDIN ITQKQEVAST EGNTGNDVIS ETNTFSVENV SNLSDEEMGT HQSEVKEGED VAAGNADDVD LDVFDWY
101: DVLAVSSVDR VSQNDDPHDD PSEVVTLQES LVVSDTQASS THPTSKTVDD LADFGELFDT HSEEENAAKS KLKIKVKLSK AASKSRKTGQ KKAASTVDVV
201: SQNKEDGNDD VRGCNDEQVQ AQHEEHVQTS DSQPPLGTDD GTVDNFVNHN RILEEPGPEE TAAKLCPKSQ RKPGRASSKA VGTSDDYAAA NLKDINASVD
301: IDSQDGLINP HTDDTQPIFG EPSAEAAATF LLDLGKKKSK GKSVTFVLPD DYEGVAATDT NHNDIGSDEN LNTLPQQAPQ KHCLTEEHSD DQEYTDRESQ
401: YYEGERSDHG VEQQSKLDVG KQELSMKLRS RTEIQKVGLS EHIVDDHLDE DFVEPSAAEQ NNDSSDENTA GGKQKAPRKS RKKDPNKEPL RGSKRTSTKS
501: TSEKSQPNQQ KNKSEVSSRG CKRALKDTMT EQPEKNLTHR IRQKRAQEVQ TLLQKPDHEI DRMKLSVTHL RLLQEARERI QSKTPSGPSS SNQSSRFGDT
601: DDFDPFGDNY DNDRTENQAL ESATKLNYHS YMDKKTRAKW TKSDTDLFYQ GLQQFGSDFA MIQQLFPDKS RDQVRQKFKS EDKKHPMQVH DAILHRSRDN
701: LYLKQVMKQL NIEDSLKDIN ITQKQEVAST EGNTGNDVIS ETNTFSVENV SNLSDEEMGT HQSEVKEGED VAAGNADDVD LDVFDWY
001: MDLDFDDQPS DHAAPAVRAG ARFKPKGRPQ PKKKQVSLST TQTTLSPDVA QEKLSTQSED LVPLDGSSEI PSNALPSETN VPDSGSINKS TIGTLSEENE
101: DAFPRGVHWS VKPSILRACN NVNLVGNRRD DGIEATTSFP DDPRTQDSAI FGDYVTPETG ADEGRVDMET LDIVQEEGTT SSYVQHTGKL QPKPRLLETV
201: VEEPEPHYSA GDTGYFPMGT NESEFMANVE SRNGFSTYED LQEEELNIPE APRETVGEME AQNASGGWEQ EEQGVSPCIN NTVTGEEENC MGNTVEEQSK
301: RESKTGKSKR ATSRKRKKTS EEPNKSSEKT EQKKFKHSSR RQKRTLEKEL LETPDHEIRS LPLRDMLRLV EYKEWMQKKE AKGAGVQPSQ ESNNMNGSGS
401: QYHSQGFDEE DEFGDFGIES SEYQENNVVK PDSPVNYQTY MNKTSRTRWS KEDTELFYEG IQEFGSNLSM IQQLFPERTR EQMKLKFKLE ERRNPLKLND
501: ALSSRSKHFT HFKNVIKKLQ QEAAAAKEGE EEEEAGAEAE TTDVPENEEP EKSEETERAS DGVAAGVKES DGGDVENGVR SDGGDECDDD EDFWNSYKSD
601: M
101: DAFPRGVHWS VKPSILRACN NVNLVGNRRD DGIEATTSFP DDPRTQDSAI FGDYVTPETG ADEGRVDMET LDIVQEEGTT SSYVQHTGKL QPKPRLLETV
201: VEEPEPHYSA GDTGYFPMGT NESEFMANVE SRNGFSTYED LQEEELNIPE APRETVGEME AQNASGGWEQ EEQGVSPCIN NTVTGEEENC MGNTVEEQSK
301: RESKTGKSKR ATSRKRKKTS EEPNKSSEKT EQKKFKHSSR RQKRTLEKEL LETPDHEIRS LPLRDMLRLV EYKEWMQKKE AKGAGVQPSQ ESNNMNGSGS
401: QYHSQGFDEE DEFGDFGIES SEYQENNVVK PDSPVNYQTY MNKTSRTRWS KEDTELFYEG IQEFGSNLSM IQQLFPERTR EQMKLKFKLE ERRNPLKLND
501: ALSSRSKHFT HFKNVIKKLQ QEAAAAKEGE EEEEAGAEAE TTDVPENEEP EKSEETERAS DGVAAGVKES DGGDVENGVR SDGGDECDDD EDFWNSYKSD
601: M
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JVA4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.