Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
No Homology Data
Protein Annotations
| MapMan:15.5.32 | Gene3D:3.30.450.40 | Gene3D:4.10.280.10 | InterPro:GAF-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR029016 | InterPro:IPR036638 |
| InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF93 |
| SUPFAM:SSF47459 | EnsemblPlantsGene:TraesCS1B01G113100 | EnsemblPlants:TraesCS1B01G113100.1 | InterPro:bHLH_dom | TIGR:cd00083 | SEG:seg |
Description
No Description!
Coordinates
chr1B:+:131775632..131784585
Molecular Weight (calculated)
57616.1 Da
IEP (calculated)
5.834
GRAVY (calculated)
-0.567
Length
522 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSGEVHRS LQAVAQGLRW TYAILWQLCP DQGALVWTEG HYNGAIKTRK TVQPAVAQAQ APAAEAADQA RSRQLRELFD SLAREAAAGG GTGFRDVHGC
101: AQEARRPSAA LAPEDLTETE WFYLMSASYS FPPGVGLPGR AFARGGHVWL SRANEVDSKA FSRAILARSA GIKTVVCIPI VDGVLEIGTT EKVEEEMGLV
201: QYAMAIFMDQ QETHMIPSIC HSNQTSHIDQ QSLQTHTGQT KPEPNKFDPE YEDDEMEYDE DEIDAGCASG SETNTGRDYC RHGPPNITSN DDHATHNAGR
301: SSELMQVEMS ERVRDGCSSN LGDEIQMLMV CQNGTSDHSN LHVQDEPWHF LYEELCSGYP QSSAAGEDQA MAENAHYAHT VSLILHRNNA RRQADGLNTR
401: SYLAVSHRSS FSRWDAGIHG RTVAEGTTRQ KMLKSVLLFF NAACNKPPGD LILRCDEAGA RREVDFGASH VMQERKRREK LNERFIILRS LVPFVTKAHG
501: QSVDTRGHDR VREAADEAHP GP
101: AQEARRPSAA LAPEDLTETE WFYLMSASYS FPPGVGLPGR AFARGGHVWL SRANEVDSKA FSRAILARSA GIKTVVCIPI VDGVLEIGTT EKVEEEMGLV
201: QYAMAIFMDQ QETHMIPSIC HSNQTSHIDQ QSLQTHTGQT KPEPNKFDPE YEDDEMEYDE DEIDAGCASG SETNTGRDYC RHGPPNITSN DDHATHNAGR
301: SSELMQVEMS ERVRDGCSSN LGDEIQMLMV CQNGTSDHSN LHVQDEPWHF LYEELCSGYP QSSAAGEDQA MAENAHYAHT VSLILHRNNA RRQADGLNTR
401: SYLAVSHRSS FSRWDAGIHG RTVAEGTTRQ KMLKSVLLFF NAACNKPPGD LILRCDEAGA RREVDFGASH VMQERKRREK LNERFIILRS LVPFVTKAHG
501: QSVDTRGHDR VREAADEAHP GP
001: MDESSIIPAE KVAGAEKKEL QGLLKTAVQS VDWTYSVFWQ FCPQQRVLVW GNGYYNGAIK TRKTTQPAEV TAEEAALERS QQLRELYETL LAGESTSEAR
101: ACTALSPEDL TETEWFYLMC VSFSFPPPSG MPGKAYARRK HVWLSGANEV DSKTFSRAIL AKSAKIQTVV CIPMLDGVVE LGTTKKVRED VEFVELTKSF
201: FYDHCKTNPK PALSEHSTYE VHEEAEDEEE VEEEMTMSEE MRLGSPDDED VSNQNLHSDL HIESTHTLDT HMDMMNLMEE GGNYSQTVTT LLMSHPTSLL
301: SDSVSTSSYI QSSFATWRVE NGKEHQQVKT APSSQWVLKQ MIFRVPFLHD NTKDKRLPRE DLSHVVAERR RREKLNEKFI TLRSMVPFVT KMDKVSILGD
401: TIAYVNHLRK RVHELENTHH EQQHKRTRTC KRKTSEEVEV SIIENDVLLE MRCEYRDGLL LDILQVLHEL GIETTAVHTS VNDHDFEAEI RAKVRGKKAS
501: IAEVKRAIHQ VIIHDTNL
101: ACTALSPEDL TETEWFYLMC VSFSFPPPSG MPGKAYARRK HVWLSGANEV DSKTFSRAIL AKSAKIQTVV CIPMLDGVVE LGTTKKVRED VEFVELTKSF
201: FYDHCKTNPK PALSEHSTYE VHEEAEDEEE VEEEMTMSEE MRLGSPDDED VSNQNLHSDL HIESTHTLDT HMDMMNLMEE GGNYSQTVTT LLMSHPTSLL
301: SDSVSTSSYI QSSFATWRVE NGKEHQQVKT APSSQWVLKQ MIFRVPFLHD NTKDKRLPRE DLSHVVAERR RREKLNEKFI TLRSMVPFVT KMDKVSILGD
401: TIAYVNHLRK RVHELENTHH EQQHKRTRTC KRKTSEEVEV SIIENDVLLE MRCEYRDGLL LDILQVLHEL GIETTAVHTS VNDHDFEAEI RAKVRGKKAS
501: IAEVKRAIHQ VIIHDTNL
Arabidopsis Description
TT8Transcription factor TT8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FT81]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.