Factsheet for TraesCS1B01G268800.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

peroxisome 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G257600.1	Wheat	peroxisome	98.85	98.96
TraesCS1A01G258300.1	Wheat	peroxisome	98.75	98.85
HORVU1Hr1G063560.5	Barley	mitochondrion, peroxisome, plasma membrane	97.7	95.41
EES13591	Sorghum	cytosol, peroxisome, plasma membrane	83.61	84.05
Zm00001d050214_P001	Maize	plasma membrane	82.88	83.58
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	80.9	81.24
GSMUA_Achr5P22720_001	Banana	cytosol, peroxisome, plasma membrane	72.76	80.86
EER92929	Sorghum	cytosol, peroxisome, plasma membrane	80.69	80.6
TraesCS2B01G530500.1	Wheat	peroxisome	79.65	80.23
Zm00001d027490_P002	Maize	plasma membrane	80.06	80.06
KXG34177	Sorghum	peroxisome	79.44	79.94
Os08t0241800-01	Rice	plasma membrane	25.68	79.35
GSMUA_Achr4P20580_001	Banana	cytosol, peroxisome, plasma membrane	77.14	79.29
TraesCS6B01G393400.1	Wheat	peroxisome	69.1	76.0
TraesCS7B01G421700.1	Wheat	plasma membrane	75.26	75.97
TraesCS7B01G047600.1	Wheat	peroxisome	73.49	74.42
TraesCS4B01G031000.1	Wheat	plasma membrane	71.29	74.08
TraesCS4B01G376400.1	Wheat	peroxisome	72.03	70.62
TraesCS4B01G300000.1	Wheat	plasma membrane	65.97	66.67
VIT_02s0025g03360.t01	Wine grape	peroxisome	8.14	51.32

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0008553	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0120029
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	InterPro:P-type_ATPase_IIIA	PFAM:PF00122
PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR42861
PANTHER:PTHR42861:SF34	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665
TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01647	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G268800	EnsemblPlants:TraesCS1B01G268800.1	TIGR:cd02076
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:471760097..471764361

Molecular Weight (calculated)

105035.0 Da

IEP (calculated)

6.476

GRAVY (calculated)

0.094

Length

958 amino acids

Sequence
(BLAST)

001: MAAAAAAEGL ERIKNEAVDL ENIPVEEVFE NLQCSQAGLT SKDGQERIAV FGPNKLEEKK ESEILKFLGF MWNPLSWVME VAAIMAIALA NGGGRPPDWQ
101: DFVGIIALLL LNSTISYIEE SNAGSSAKAL MANLAPKTKV LRDGRWSEQD ASILVPGDII SIKLGDIVPA DARLLLEGDP LKIDQSALTG ESLPVTKNPG
201: DSVYSGSTCK QGEIEAVVIA TGVHTFFGKA AHLVDSTNQV GHFQKVLRAI GNFCIGAIAI GMIVEIIVMY FIQHRRYRDG IDNLLVLLIG GIPIAMPTVL
301: SVTMAIGSHR LSKQGAITKR MTAIEEMAGM DVLCSDKTGT LTLNKLSVDR NLIEVFAAGV AKDEVLLFAA MASRVENQDA IDAAMVGMLA DPKEARAGIQ
401: EMHFLPFNPV DKRTALTYQD AADGTWHRVS KGAPEQILEL CNCRDDVKNK AHAIIDKYAE RGLRSLAVAR QEVPERSKDS SGGPWEFVGL LPLLDPPRHD
501: SAETIKQALN LGVNVKMITG DQLAIAKETG RRLGMGTNMY PSSALLGQSV DESIVSLPVD ELIEKADGFA GVFPEHKYEI VKKLQQMKHI CGMTGDGVND
601: APALKKADIG IAVADATDAA RSASDIVLTE PGLSVIISAV LTSRAIFQRM KNYTIYAVSI TIRIVLGFML IALIWKFDFS PFMILVIAIL NDGTIMTISK
701: DRVKPSPHPD SWKLPEIFIT GIVYGAYLAV TTVVFFFAMT STDFFSEKFH VRSLRGNKDA MMSALYLQVS IISQALIFVT RSRRWCFQER PGLWLCFAFV
801: VAQIIATVIA VYCNLPFAHI RGIGWGWAGV IWLYSIITFI PLDLFKFAIG YALSGKAWDT LFENKIAFTN KKDYGKEKRE LQWATAQRTL HGLPTADPNS
901: TPQERSNYGE LSEMAEQAKR RAEMARLREL STLKGRVESA VRLKGLDMET VDNHHYTV

Best Arabidopsis Sequence Match ( AT4G30190.1 )
(BLAST)

001: MSSLEDIKNE TVDLEKIPIE EVFQQLKCSR EGLTTQEGED RIQIFGPNKL EEKKESKLLK FLGFMWNPLS WVMEMAAIMA IALANGDGRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL TAIGNFCICS IAIGMVIEII VMYPIQRRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDGSGNWHR VSKGAPEQIL ELAKASNDLS KKVLSIIDKY AERGLRSLAV ARQVVPEKTK ESPGAPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSSALLGT HKDANLASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLKEIF ATGVVLGGYQ AIMTVIFFWA AHKTDFFSDT FGVRSIRDNN HELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FLIAQLIATL
801: IAVYANWEFA KIRGIGWGWA GVIWLYSIVT YFPLDVFKFA IRYILSGKAW LNLFENKTAF TMKKDYGKEE REAQWALAQR TLHGLQPKEA VNIFPEKGSY
901: RELSEIAEQA KRRAEIARLR ELHTLKGHVE SVVKLKGLDI ETPSHYTV

Arabidopsis Description

HA2Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:F4JPJ7]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.