Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
No Homology Data
Protein Annotations
| Gene3D:1.20.58.1880 | MapMan:15.4.3.2 | MapMan:15.5.2.2 | GO:GO:0000126 | GO:GO:0001026 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006383 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017884 | PFAM:PF15963 | PFscan:PS51293 | PANTHER:PTHR22929 |
| InterPro:SANT/Myb | InterPro:SANT_dom | SMART:SM00717 | SUPFAM:SSF46689 | InterPro:TFIIIB_B'' | EnsemblPlantsGene:TraesCS1B01G326700 |
| EnsemblPlants:TraesCS1B01G326700.1 | TIGR:cd00167 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1B:-:553017549..553021065
Molecular Weight (calculated)
87374.7 Da
IEP (calculated)
4.863
GRAVY (calculated)
-1.084
Length
787 amino acids
Sequence
(BLAST)
(BLAST)
001: MIDDEANFGD ITDAPAEAEA AVKFHPNKLR GKLRKKSVPS RSVVPNHTVE TSDEKAVALS QDNLSQGLTT NQEITSSTVL GSETIGGAEA CGGTLYTPSD
101: DVLTVSSVDR VSQDDDPHDD PSEVATLQEN LVVSDTQASS THPTSKTVDD LADFGELFDT HSEEENVAKS KLKIKVKLSK AASKSRKTGQ KKAASTVDVV
201: SQNKEDGNDD LRGCNDEQVQ APRHEEHVQT SDSQPPLGTD DGTVDNFVNH NRILEEPGPE ETAAKLRPKS QRKPGRASSK AVGTSDDHAE ANLKDINASV
301: DIDSEDGLIN PHTDDTQPIF GEPSAEAAAT FLLDLGKKKG KGKSVTFVLP DDYEGVAATD TNHNDIHSDE NLNTLPQQAP QKHCLTEEHS DDQEYTDRES
401: QYHEGERSDH GVEQQSKLDV GKQELSMKLR SRTEIQKVGL SEHIVDDHLD EDFVEPSATE QNNDSGDENT AGGKQKAPRK SRKKDPNKEP LRGSKRTSTK
501: STSEKSQPNQ QKNKSEVSSR GRKRALKDTM TEQPEKKLTH RIRQKRAQEV QTLLQKPDHE IDRMKLSVTH LRLLQEARER IQSKTPSGPS SSNQSSHFGD
601: TDDFDPFGDN YDNDRTENHA LENATKLNYH SYMDKKTRAK WTKSDTDLFY QGLRQFGSDF AMIQQLFPDK SRDQVRQKFK SEDKKHPMQV HDAILHRSRD
701: NLYLKQVMKQ LNIEDSLKDI NSTQKQEVAS TEGNTGNDVI SETNISVENV SNLSDEEMGT LQSEVKEGED VAAGNADDVD LDVFDWY
101: DVLTVSSVDR VSQDDDPHDD PSEVATLQEN LVVSDTQASS THPTSKTVDD LADFGELFDT HSEEENVAKS KLKIKVKLSK AASKSRKTGQ KKAASTVDVV
201: SQNKEDGNDD LRGCNDEQVQ APRHEEHVQT SDSQPPLGTD DGTVDNFVNH NRILEEPGPE ETAAKLRPKS QRKPGRASSK AVGTSDDHAE ANLKDINASV
301: DIDSEDGLIN PHTDDTQPIF GEPSAEAAAT FLLDLGKKKG KGKSVTFVLP DDYEGVAATD TNHNDIHSDE NLNTLPQQAP QKHCLTEEHS DDQEYTDRES
401: QYHEGERSDH GVEQQSKLDV GKQELSMKLR SRTEIQKVGL SEHIVDDHLD EDFVEPSATE QNNDSGDENT AGGKQKAPRK SRKKDPNKEP LRGSKRTSTK
501: STSEKSQPNQ QKNKSEVSSR GRKRALKDTM TEQPEKKLTH RIRQKRAQEV QTLLQKPDHE IDRMKLSVTH LRLLQEARER IQSKTPSGPS SSNQSSHFGD
601: TDDFDPFGDN YDNDRTENHA LENATKLNYH SYMDKKTRAK WTKSDTDLFY QGLRQFGSDF AMIQQLFPDK SRDQVRQKFK SEDKKHPMQV HDAILHRSRD
701: NLYLKQVMKQ LNIEDSLKDI NSTQKQEVAS TEGNTGNDVI SETNISVENV SNLSDEEMGT LQSEVKEGED VAAGNADDVD LDVFDWY
001: MDLDFDDQPS DHAAPAVRAG ARFKPKGRPQ PKKKQVSLST TQTTLSPDVA QEKLSTQSED LVPLDGSSEI PSNALPSETN VPDSGSINKS TIGTLSEENE
101: DAFPRGVHWS VKPSILRACN NVNLVGNRRD DGIEATTSFP DDPRTQDSAI FGDYVTPETG ADEGRVDMET LDIVQEEGTT SSYVQHTGKL QPKPRLLETV
201: VEEPEPHYSA GDTGYFPMGT NESEFMANVE SRNGFSTYED LQEEELNIPE APRETVGEME AQNASGGWEQ EEQGVSPCIN NTVTGEEENC MGNTVEEQSK
301: RESKTGKSKR ATSRKRKKTS EEPNKSSEKT EQKKFKHSSR RQKRTLEKEL LETPDHEIRS LPLRDMLRLV EYKEWMQKKE AKGAGVQPSQ ESNNMNGSGS
401: QYHSQGFDEE DEFGDFGIES SEYQENNVVK PDSPVNYQTY MNKTSRTRWS KEDTELFYEG IQEFGSNLSM IQQLFPERTR EQMKLKFKLE ERRNPLKLND
501: ALSSRSKHFT HFKNVIKKLQ QEAAAAKEGE EEEEAGAEAE TTDVPENEEP EKSEETERAS DGVAAGVKES DGGDVENGVR SDGGDECDDD EDFWNSYKSD
601: M
101: DAFPRGVHWS VKPSILRACN NVNLVGNRRD DGIEATTSFP DDPRTQDSAI FGDYVTPETG ADEGRVDMET LDIVQEEGTT SSYVQHTGKL QPKPRLLETV
201: VEEPEPHYSA GDTGYFPMGT NESEFMANVE SRNGFSTYED LQEEELNIPE APRETVGEME AQNASGGWEQ EEQGVSPCIN NTVTGEEENC MGNTVEEQSK
301: RESKTGKSKR ATSRKRKKTS EEPNKSSEKT EQKKFKHSSR RQKRTLEKEL LETPDHEIRS LPLRDMLRLV EYKEWMQKKE AKGAGVQPSQ ESNNMNGSGS
401: QYHSQGFDEE DEFGDFGIES SEYQENNVVK PDSPVNYQTY MNKTSRTRWS KEDTELFYEG IQEFGSNLSM IQQLFPERTR EQMKLKFKLE ERRNPLKLND
501: ALSSRSKHFT HFKNVIKKLQ QEAAAAKEGE EEEEAGAEAE TTDVPENEEP EKSEETERAS DGVAAGVKES DGGDVENGVR SDGGDECDDD EDFWNSYKSD
601: M
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JVA4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.