Factsheet for TraesCS1D01G043400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G042900.1	Wheat	nucleus	97.5	96.59
TraesCS1B01G055800.1	Wheat	nucleus	92.97	92.82
HORVU1Hr1G008690.1	Barley	nucleus	85.47	90.56
Os08t0565700-01	Rice	nucleus	58.44	62.96
Zm00001d031858_P001	Maize	nucleus	61.41	60.28
EES14036	Sorghum	nucleus	60.94	58.56
TraesCS4D01G204500.1	Wheat	nucleus	58.44	55.08
TraesCS3D01G450600.1	Wheat	nucleus	56.25	53.02
TraesCS3D01G450700.1	Wheat	nucleus	51.25	46.92
TraesCS2D01G240000.1	Wheat	nucleus	42.5	40.3
TraesCS1D01G307700.1	Wheat	nucleus	30.47	28.93
TraesCS5D01G152000.1	Wheat	nucleus	30.62	28.49
TraesCS1D01G366800.1	Wheat	nucleus	29.69	28.11
TraesCS3D01G329100.1	Wheat	nucleus	29.22	25.17
TraesCS3D01G433900.1	Wheat	nucleus	26.41	24.49
TraesCS4D01G278500.1	Wheat	nucleus	29.53	23.08
TraesCS3D01G378200.1	Wheat	plastid	24.53	22.92
TraesCS3D01G307900.1	Wheat	nucleus	11.56	22.29
TraesCS1D01G241500.1	Wheat	nucleus	26.41	20.63
TraesCS2D01G389100.1	Wheat	nucleus	24.69	16.46
TraesCS5D01G197700.2	Wheat	plastid	27.19	15.34
TraesCS2D01G478100.1	Wheat	nucleus	13.91	14.88
TraesCS1D01G118300.1	Wheat	nucleus, plastid	27.66	14.46
TraesCS2D01G378500.3	Wheat	nucleus	14.06	13.27
TraesCS6D01G208400.1	Wheat	nucleus	13.44	12.63
KRH67447	Soybean	nucleus	14.22	12.55
TraesCS2D01G566400.1	Wheat	nucleus	14.38	12.48
TraesCS2D01G477200.1	Wheat	mitochondrion, nucleus	14.22	12.33
TraesCS5D01G193000.2	Wheat	nucleus	18.12	10.33
TraesCS6D01G254900.2	Wheat	nucleus	16.25	6.44
CDY18235	Canola	mitochondrion	0.0	0.0
TraesCS5D01G192900.1	Wheat	cytosol	0.0	0.0
KRH67444	Soybean	cytosol	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987
GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968
InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987
PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS51015
PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF328	InterPro:PUA-like_sf	InterPro:Pre-SET_dom	InterPro:SET_dom
SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199
SUPFAM:SSF88697	EnsemblPlantsGene:TraesCS1D01G043400	EnsemblPlants:TraesCS1D01G043400.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr1D:-:22624026..22625948

Molecular Weight (calculated)

70215.1 Da

IEP (calculated)

6.533

GRAVY (calculated)

-0.417

Length

640 amino acids

Sequence
(BLAST)

001: MASSPPPPPP PHPLPTQIPL TPKPDPDAPQ SPSPVPSTSL IPKLEPIALT PELEPSPDGH PDLTGHLHFT QHQIDAVPAD HRLVVSNPQP EPNPQGSIPP
101: AHSDTSVSSS SSTAKKRARG GEMVRVNTVT PQDHIHFRSL VRRARLTFEA LRGIYQREES YDGGPRNRFD LRASSKMLSR GLWLYRDVRI VGPIPGVLVG
201: DAFHYRAELC VVGLHCTPQA GIGYIPASLV SEGHPVATSI VSSGGYLDDE DNGQVLVYSG SGGRQRNRVE HHADQTLERG NLALHYSCHY GVEVRVIRCH
301: ACDSSPSRKV YVYDGLYKAV SSTYEPGKSG RHVCKYTLVR IPGQEELGSS NWCLAKDIKD KLLANQALPP GYISPDLSNG REVLRVPVFN GVDHESSLLD
401: FDYIARPEFP LPLSRVKQQH WGCHCVTSPC GPECGCVIKN GGGGPVYNED GTLVRGRPVV YECGALCGCP MSCGNRATQR GMKHTLEVFR SMETEWGART
501: LDLIQPGAFV CEYSGDVVVT TGECEFAMDE GSVIDPKRFP KRWTEWGDAS PALVGDDDDR VPRPQFPHFQ EPGYVLDVSR RRNLASYISH SCTPNVFVQY
601: VVRGGENESC PHLMVFAMDA IPPMRELSID YGMDDQQICA

Best Arabidopsis Sequence Match ( AT2G33290.1 )
(BLAST)

001: MSTLLPFPDL NLMPDSQSST AGTTAGDTVV TGKLEVKSEP IEEWQTPPSS TSDQSANTDL IAEFIRISEL FRSAFKPLQV KGLDGVSVYG LDSGAIVAVP
101: EKENRELIEP PPGFKDNRVS TVVVSPKFER PRELARIAIL GHEQRKELRQ VMKRTRMTYE SLRIHLMAES MKNHVLGQGR RRRSDMAAAY IMRDRGLWLN
201: YDKHIVGPVT GVEVGDIFFY RMELCVLGLH GQTQAGIDCL TAERSATGEP IATSIVVSGG YEDDEDTGDV LVYTGHGGQD HQHKQCDNQR LVGGNLGMER
301: SMHYGIEVRV IRGIKYENSI SSKVYVYDGL YKIVDWWFAV GKSGFGVFKF RLVRIEGQPM MGSAVMRFAQ TLRNKPSMVR PTGYVSFDLS NKKENVPVFL
401: YNDVDGDQEP RHYEYIAKAV FPPGIFGQGG ISRTGCECKL SCTDDCLCAR KNGGEFAYDD NGHLLKGKHV VFECGEFCTC GPSCKSRVTQ KGLRNRLEVF
501: RSKETGWGVR TLDLIEAGAF ICEYAGVVVT RLQAEILSMN GDVMVYPGRF TDQWRNWGDL SQVYPDFVRP NYPSLPPLDF SMDVSRMRNV ACYISHSKEP
601: NVMVQFVLHD HNHLMFPRVM LFALENISPL AELSLDYGLA DEVNGKLAIC N

Arabidopsis Description

SUVH2Histone-lysine N-methyltransferase family member SUVH2 [Source:UniProtKB/Swiss-Prot;Acc:O22781]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.