Factsheet for TraesCS1D01G118300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G117300.1	Wheat	nucleus	72.71	93.98
TraesCS1B01G137100.1	Wheat	nucleus, plastid	94.04	86.67
HORVU1Hr1G025960.1	Barley	nucleus, plastid	87.75	77.6
Os08t0400200-00	Rice	nucleus	48.77	50.9
EES13798	Sorghum	nucleus	46.49	45.16
Os08t0400000-01	Rice	mitochondrion	34.07	44.98
EES13797	Sorghum	nucleus	40.36	43.68
Zm00001d032343_P001	Maize	plastid	37.58	41.59
Os08t0399300-00	Rice	nucleus	28.76	40.37
TraesCS5D01G197700.2	Wheat	plastid	36.27	39.15
OQU80395	Sorghum	nucleus	18.63	38.45
Zm00001d050267_P001	Maize	peroxisome	18.3	37.77
TraesCS1D01G307700.1	Wheat	nucleus	17.32	31.45
TraesCS1D01G366800.1	Wheat	nucleus	17.24	31.21
TraesCS3D01G433900.1	Wheat	nucleus	16.59	29.42
TraesCS5D01G152000.1	Wheat	nucleus	16.5	29.36
TraesCS2D01G389100.1	Wheat	nucleus	22.63	28.85
TraesCS3D01G329100.1	Wheat	nucleus	17.08	28.13
TraesCS2D01G240000.1	Wheat	nucleus	15.36	27.85
TraesCS1D01G043400.1	Wheat	nucleus	14.46	27.66
TraesCS4D01G204500.1	Wheat	nucleus	14.62	26.36
TraesCS1D01G241500.1	Wheat	nucleus	17.48	26.13
TraesCS3D01G450600.1	Wheat	nucleus	14.3	25.77
TraesCS4D01G278500.1	Wheat	nucleus	16.99	25.4
TraesCS3D01G450700.1	Wheat	nucleus	14.46	25.32
TraesCS5D01G193000.2	Wheat	nucleus	23.2	25.29
TraesCS3D01G307900.1	Wheat	nucleus	6.78	25.0
TraesCS3D01G378200.1	Wheat	plastid	12.83	22.92
TraesCS2D01G478100.1	Wheat	nucleus	8.25	16.89
TraesCS2D01G378500.3	Wheat	nucleus	8.82	15.93
TraesCS6D01G208400.1	Wheat	nucleus	8.82	15.86
TraesCS2D01G477200.1	Wheat	mitochondrion, nucleus	9.31	15.45
TraesCS2D01G566400.1	Wheat	nucleus	8.91	14.79
TraesCS6D01G254900.2	Wheat	nucleus	11.27	8.54
TraesCS5D01G192900.1	Wheat	cytosol	0.74	5.52

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant
InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987
PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868
PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF471	InterPro:PUA-like_sf	InterPro:Post-SET_dom
InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf
InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	EnsemblPlantsGene:TraesCS1D01G118300	EnsemblPlants:TraesCS1D01G118300.1	SEG:seg

Description

No Description!

Coordinates

chr1D:+:114153239..114157162

Molecular Weight (calculated)

132047.0 Da

IEP (calculated)

6.891

GRAVY (calculated)

-0.432

Length

1224 amino acids

Sequence
(BLAST)

0001: MAALPRPSPH PLSPPLAAGG TVVRVRGEAE VARGRRQGGG DGAERQEVAV AAGGDNVAVS GGLVGDSAAG VSGLVALEER GCGGGKLQRK RGLEFPARPP
0101: PKRRAVSAVR HFPPGCGRDA PPLIVGGDDD GLPVGTAPSS GARPAGSSAR EEGGLSLQTA PANADVPVPE KLTASDSGAP VSDGDHRGPE AAEVKSSDST
0201: ERGADLVVKG RGRTRPISRL LAKRRMISAN RRFPPGCGMD VVVLPLASRG GDEVGLQLEA LPPGGGLGAL EDGRCSNVCA TAMGTTEAVG KNALDAIVNV
0301: QELEEGEIPP EPYQVLQEFP VTHSNIMPEL TADGLDEKIS VNMLQRKGES VSWEVAEDLK VMNECEGSSP KAASKLSAEA PLKEYLGDTT EAVRKNALDV
0401: IVEVQELEEG ELPTEPDHVL QENPVTHNNS LHELTAGTLE CVVPSMVDAE PPLRHFSNEK IPVNMLEHKG ESVSWEVAED LKVMKKCKGN SPKAASKPPP
0501: EDPLKEYLGD KKVSESCSMK SAPLDVEAGV HGDGIMRRMV TFTARNYPEE GNSPKGASKP SPEDPLKEYL VDKKVSESSA PLDVAAGVHG DGIMRRVVSF
0601: TARKTSRLPV EANHKSALVN LDRPCSMGKE KESVATMSES FAPTKKLKIK GPAQSKYLPM NTISSKENLK HEEASHLEDD EVLNAIAVHE GKLEMYLNDP
0701: SWRHMQHGGQ TADARSKVRM ICRRFQFICR TIVQAVEQGS LKSRRIDLAA DKLIRKLPGF TKQGPIVGKV PGVEIGDEFL YRVELAIVGL HRPYQGGIDT
0801: TKDINGMPIA ISIVASGGYP DDLSSSGEII YTGSGGKPAG KKENEDQKLV RGNLALKNCI KTETPVRVIH GFKGPNREEG SHSKAKEVSI FTYDGLYHVV
0901: QCWQEGLPGS RVFKYRLQRI SGQPELPLHV AKVLRKSVAR PGLCIADISQ GKEKIPICVV NNIDAARPAS FKYITRIKGS SLTAKRSHQG CDCTNGCSDS
1001: ASCACVLKNG GEFPFNFNGA VVHAKPLIYE CGPSCRCPPS CHSRVSQHGM KIPLEVFRTT KTGWGVRSLR SISAGSFICE YVGELLHSDE ANQRMNDEYL
1101: FDIGHNYDIW KGMPSVVPGL SSSGPRSVTM DDDRAFTIDA AEYGNIGRFI NHSCSPNLYA QNILWDHDDK RVPHIMFFAA ENISPLQELT YDYNYEIDHV
1201: RDMNGEVKVK YCHCGSPQCR DRLY

Best Arabidopsis Sequence Match ( AT2G22740.2 )
(BLAST)

001: MEMGVMENLM VHTEISKVKS QSNGEVEKRG VSVLENGGVC KLDRMSGLKF KRRKVFAVRD FPPGCGSRAM EVKIACENGN VVEDVKVVES LVKEEESLGQ
101: RDASENVSDI RMAEPVEVQP LRICLPGGDV VRDLSVTAGD ECSNSEQIVA GSGVSSSSGT ENIVRDIVVY ADESSLGMDN LDQTQPLEIE MSDVAVAKPR
201: LVAGRKKAKK GIACHSSLKV VSREFGEGSR KKKSKKNLYW RDRESLDSPE QLRILGVGTS SGSSSGDSSR NKVKETLRLF HGVCRKILQE DEAKPEDQRR
301: KGKGLRIDFE ASTILKRNGK FLNSGVHILG EVPGVEVGDE FQYRMELNIL GIHKPSQAGI DYMKYGKAKV ATSIVASGGY DDHLDNSDVL TYTGQGGNVM
401: QVKKKGEELK EPEDQKLITG NLALATSIEK QTPVRVIRGK HKSTHDKSKG GNYVYDGLYL VEKYWQQVGS HGMNVFKFQL RRIPGQPELS WVEVKKSKSK
501: YREGLCKLDI SEGKEQSPIS AVNEIDDEKP PLFTYTVKLI YPDWCRPVPP KSCCCTTRCT EAEARVCACV EKNGGEIPYN FDGAIVGAKP TIYECGPLCK
601: CPSSCYLRVT QHGIKLPLEI FKTKSRGWGV RCLKSIPIGS FICEYVGELL EDSEAERRIG NDEYLFDIGN RYDNSLAQGM SELMLGTQAG RSMAEGDESS
701: GFTIDAASKG NVGRFINHSC SPNLYAQNVL YDHEDSRIPH VMFFAQDNIP PLQELCYDYN YALDQVRDSK GNIKQKPCFC GAAVCRRRLY

Arabidopsis Description

SUVH6Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.