Factsheet for TraesCS1D01G241500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G241600.2	Wheat	nucleus	96.09	96.09
OQU77925	Sorghum	nucleus	61.9	67.24
GSMUA_Achr8P00500_001	Banana	extracellular	21.12	63.37
TraesCS3D01G433900.1	Wheat	nucleus	52.38	62.17
VIT_14s0068g01090.t01	Wine grape	nucleus	37.73	58.86
KRG94709	Soybean	nucleus	19.66	53.49
GSMUA_Achr8P00490_001	Banana	nucleus	22.47	50.83
Bra006226.1-P	Field mustard	nucleus	36.75	50.33
CDX78549	Canola	nucleus	36.87	50.0
CDX70530	Canola	nucleus	36.75	49.92
Solyc02g094520.2.1	Tomato	nucleus	40.54	49.04
KRH20251	Soybean	nucleus, plastid	38.71	47.89
AT5G13960.1	Thale cress	nucleus	36.26	47.6
KRH06819	Soybean	nucleus	40.54	46.11
TraesCS1D01G307700.1	Wheat	nucleus	23.57	28.64
TraesCS1D01G366800.1	Wheat	nucleus	23.44	28.4
TraesCS1D01G043400.1	Wheat	nucleus	20.63	26.41
TraesCS5D01G152000.1	Wheat	nucleus	22.1	26.31
TraesCS2D01G240000.1	Wheat	nucleus	21.12	25.63
TraesCS4D01G204500.1	Wheat	nucleus	21.25	25.63
TraesCS3D01G307900.1	Wheat	nucleus	10.26	25.3
TraesCS3D01G329100.1	Wheat	nucleus	22.47	24.76
TraesCS3D01G450600.1	Wheat	nucleus	20.39	24.59
TraesCS4D01G278500.1	Wheat	nucleus	23.57	23.57
TraesCS3D01G450700.1	Wheat	nucleus	20.02	23.46
TraesCS3D01G378200.1	Wheat	plastid	18.68	22.34
TraesCS2D01G389100.1	Wheat	nucleus	22.1	18.85
TraesCS5D01G197700.2	Wheat	plastid	25.89	18.69
TraesCS1D01G118300.1	Wheat	nucleus, plastid	26.13	17.48
TraesCS2D01G478100.1	Wheat	nucleus	11.72	16.05
TraesCS2D01G378500.3	Wheat	nucleus	12.7	15.34
TraesCS6D01G208400.1	Wheat	nucleus	12.33	14.83
TraesCS2D01G566400.1	Wheat	nucleus	12.7	14.11
TraesCS2D01G477200.1	Wheat	mitochondrion, nucleus	11.6	12.87
TraesCS5D01G193000.2	Wheat	nucleus	16.61	12.11
TraesCS6D01G254900.2	Wheat	nucleus	15.02	7.62
TraesCS5D01G192900.1	Wheat	cytosol	0.61	3.07

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.30.280.10	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant
InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987
PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868
PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF390	InterPro:PUA-like_sf	InterPro:Post-SET_dom
InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	SMART:SM00508
InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	EnsemblPlantsGene:TraesCS1D01G241500	EnsemblPlants:TraesCS1D01G241500.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:332213014..332233946

Molecular Weight (calculated)

90427.3 Da

IEP (calculated)

7.287

GRAVY (calculated)

-0.539

Length

819 amino acids

Sequence
(BLAST)

001: MEVPGFADSP CRPRSARYAV KGYPNYAEEP DFCGPATPCR PRTARHARKG CLDYAEPPDA RAVHAPCLPR SARDADKGCL DYTEPPDARA SAAPCRPRSA
101: RYAEKGYPDY AEPDDFTDFA PRRPRSAPHT ENGCPDDAGS VGRLGHKRDE GGVPVKKPVL HYVRRKQREA AKAAETAVDM LVPLLQGMEV ESDAGALDGR
201: KRRRTVTAPM ATAMTACEVL ALPKDNEEVA PVDGGADEHG GGGKSWRLRV KETLRAFSSN YLHFVQEEEQ REQAVRQELK ASRALKRQAN NQDDEGFEEV
301: KRPSKHPDLK ALTKMQATNA VLYPEKRIGH LPGVEVGDQF YSRAEMVVLG IHGHWMKGID YMGSKHQDNP GYQDLIFPLA TCIVMSGAYE DDFDKADEII
401: YTGEGGNNLL GNGHQKTEQT LLRGNLALKN SKDNGNPIRV IRGHIEKNSY TGKVYTYDGL YKVVDCLSEK GVRGHLVFKF RLKRLEGQPP LTTSRVLFNR
501: GDVHMPISEL PGLVCRDISY GQENIPIPAT NLVDNPPVPP SGFVYSKSLQ IPEYIKIPAD SIGCNCKGDC SSSTHCLCAV HNGSDLPYVS RQKKLSAKHV
601: DSTHKNIGRL VEPKAVVFEC GANCSCHCSC VNRTSQQGLQ YHLEVFKTEL KGWAVRTWDT ILPGALICEY TGVLRRNAEV EGLLDNNYIF DIDCLQTIKG
701: LDGRKQRSGS ELHMASLQDE HDSEASQAPE YCIDAGSIGN IARFINHSCQ PNLFIQCILS SHRDIKLAKI MLVAADTIPP LQELSYDYGY GMDSVIGPDG
801: NVVKLACHCG ASDCRKRLY

Best Arabidopsis Sequence Match ( AT5G13960.1 )
(BLAST)

001: MAGKRKRANA PDQTERRSSV RVQKVRQKAL DEKARLVQER VKLLSDRKSE ICVDDTELHE KEEENVDGSP KRRSPPKLTA MQKGKQKLSV SLNGKDVNLE
101: PHLKVTKCLR LFNKQYLLCV QAKLSRPDLK GVTEMIKAKA ILYPRKIIGD LPGIDVGHRF FSRAEMCAVG FHNHWLNGID YMSMEYEKEY SNYKLPLAVS
201: IVMSGQYEDD LDNADTVTYT GQGGHNLTGN KRQIKDQLLE RGNLALKHCC EYNVPVRVTR GHNCKSSYTK RVYTYDGLYK VEKFWAQKGV SGFTVYKYRL
301: KRLEGQPELT TDQVNFVAGR IPTSTSEIEG LVCEDISGGL EFKGIPATNR VDDSPVSPTS GFTYIKSLII EPNVIIPKSS TGCNCRGSCT DSKKCACAKL
401: NGGNFPYVDL NDGRLIESRD VVFECGPHCG CGPKCVNRTS QKRLRFNLEV FRSAKKGWAV RSWEYIPAGS PVCEYIGVVR RTADVDTISD NEYIFEIDCQ
501: QTMQGLGGRQ RRLRDVAVPM NNGVSQSSED ENAPEFCIDA GSTGNFARFI NHSCEPNLFV QCVLSSHQDI RLARVVLFAA DNISPMQELT YDYGYALDSV
601: HGPDGKVKQL ACYCGALNCR KRLY

Arabidopsis Description

SUVH4Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZB6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.