Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G237200.2 | Wheat | plastid | 98.74 | 98.17 |
| HORVU2Hr1G051300.27 | Barley | plastid | 93.97 | 92.35 |
| Os07t0492100-01 | Rice | plastid | 77.47 | 79.4 |
| EER97255 | Sorghum | plastid | 77.97 | 78.57 |
| Zm00001d006443_P001 | Maize | nucleus | 76.8 | 74.98 |
| GSMUA_Achr4P26310_001 | Banana | cytosol | 5.44 | 73.03 |
| Solyc03g093850.1.1 | Tomato | cytosol | 32.66 | 64.04 |
| GSMUA_Achr4P26320_001 | Banana | cytosol, mitochondrion, nucleus | 45.64 | 59.76 |
| CDY11056 | Canola | nucleus, plastid | 47.82 | 52.19 |
| CDX92677 | Canola | nucleus, plastid | 47.65 | 51.96 |
| VIT_16s0013g00300.t01 | Wine grape | nucleus | 45.9 | 50.69 |
| AT4G25120.1 | Thale cress | nucleus | 48.66 | 50.65 |
| Bra019188.1-P | Field mustard | nucleus | 47.32 | 49.56 |
| Solyc03g093840.1.1 | Tomato | endoplasmic reticulum | 9.8 | 49.37 |
| KRH33265 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 6.87 | 37.27 |
| TraesCS2B01G254500.1 | Wheat | plastid | 6.28 | 20.33 |
Protein Annotations
| Gene3D:1.10.10.160 | Gene3D:1.10.486.10 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:DExx_box_DNA_helicase_dom_sf | InterPro:DNA_helicase_UvrD-like_C |
| InterPro:DNA_helicase_UvrD/REP | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003678 |
| GO:GO:0003824 | GO:GO:0004003 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006310 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 |
| GO:GO:0036292 | GO:GO:0043138 | InterPro:IPR013986 | InterPro:IPR014016 | InterPro:IPR014017 | InterPro:P-loop_NTPase |
| PFAM:PF00580 | PFAM:PF13361 | PFscan:PS51198 | PFscan:PS51217 | PANTHER:PTHR11070 | PANTHER:PTHR11070:SF2 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS2A01G226500 | EnsemblPlants:TraesCS2A01G226500.1 | InterPro:UvrD-like_ATP-bd | InterPro:UvrD/AddA_N | SEG:seg |
Description
No Description!
Coordinates
chr2A:-:235301329..235334711
Molecular Weight (calculated)
133785.0 Da
IEP (calculated)
6.231
GRAVY (calculated)
-0.428
Length
1194 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSRWKENIYP APPHYGSSSN PSRLLPCKRP LQSPCPPPRR PLADVTGNAL QQPGSAGGVE DIDYGYITPL PKVPKSCGFL LEDDDMDEAF LLEVDAICEE
0101: HSRSMAGKDK GREKDLTVER GPVVVAAATH AGPVCGTLED AFWTEAYAIF EECDAQRAAK SQDEELKEMV EVESSVLSCG DDSLLPAISI ADDCVKLEDT
0201: FWEVNAISKE HHVASSEMNQ EHYVASSAIN QDEIDEMYVE DGSVALCVDF PRVISIAEAG GEVVDALLGE VDVIHEGQVA MSAAKGKEEP GEMGLEMEEN
0301: EGCAPRKYYE YLHSLNDKQR EAACSDVAVP LMIVAGPGSG KTSTMVGRVL TLLKEGIPPS NILAMTFTTA AASEMRDRIG AVVGKAVAKE IIISTFHSFC
0401: LQLCRTHAEK LGRTSEFIIY GHGQQRRAII EAERLLEHGK SDGLGDAVKQ QYDGDIKHSF KDKAKKWLKF VTQAKSSGQT PEEYEKKGDL TGASILRHYN
0501: EILVSCNALD YHDFINSSIT LLTKFPEVYK ECQNTWQAIV VDEFQDTSAM QYFLLKLLAS HNHITIVGDD DQSIFSFNGA DVSGFDSFRR DFPNHKEIRL
0601: NKNYRSTRAI VEAATALIHN NTKRCNHKLA ETDNPSGSKI TVKECHSEDS QCAFVIDKII ETTSSSAEGR DFGKIAVLYR RQITGKAFQV SFRNRKIPFN
0701: VHGVAFYRKK AIKAIMAILR TTLPGCDDGP WRQALKTLLP GDKEEKKKII DHVEKISLAR KCSFISAATD IFSAKVSGTF KRTQITQGRK VLSTLYSLSK
0801: FVEREQSVSA VISSAGNMLP QQYLLEKRAV IDNDGGKLLN EDNDIRSVLQ FLMDDVSDFL STHFSSSGDA NQTEEKGCTA TLKAFIDYIS LRETENFRSR
0901: KEENKNSITL TTIHQSKGLE WDVVFIVQAN DSEIPLLHEY NGTVKEAGCT LEEERRLFYV AMTRARKKLY ILHVTVDSHR QLLLPSRFLR EIPGHLFDIQ
1001: GEGPATKYHE QPSGDISFDH AEGETSTEKP IVNQNETSPY PELMQSCLAN DFLKRFEIDD RAVVSHIFHH WAKRQAFQIP KRLLDKIKFV IDERLRGKGY
1101: KRKDVLCKLK SLLSDDEALG YAEYVIKWEQ IPIDKRSHLM RERQEHFQKQ RIENSMGSSE PTPKQISYLR SLGCTITPTS RLHASNLIEK YKSL
0101: HSRSMAGKDK GREKDLTVER GPVVVAAATH AGPVCGTLED AFWTEAYAIF EECDAQRAAK SQDEELKEMV EVESSVLSCG DDSLLPAISI ADDCVKLEDT
0201: FWEVNAISKE HHVASSEMNQ EHYVASSAIN QDEIDEMYVE DGSVALCVDF PRVISIAEAG GEVVDALLGE VDVIHEGQVA MSAAKGKEEP GEMGLEMEEN
0301: EGCAPRKYYE YLHSLNDKQR EAACSDVAVP LMIVAGPGSG KTSTMVGRVL TLLKEGIPPS NILAMTFTTA AASEMRDRIG AVVGKAVAKE IIISTFHSFC
0401: LQLCRTHAEK LGRTSEFIIY GHGQQRRAII EAERLLEHGK SDGLGDAVKQ QYDGDIKHSF KDKAKKWLKF VTQAKSSGQT PEEYEKKGDL TGASILRHYN
0501: EILVSCNALD YHDFINSSIT LLTKFPEVYK ECQNTWQAIV VDEFQDTSAM QYFLLKLLAS HNHITIVGDD DQSIFSFNGA DVSGFDSFRR DFPNHKEIRL
0601: NKNYRSTRAI VEAATALIHN NTKRCNHKLA ETDNPSGSKI TVKECHSEDS QCAFVIDKII ETTSSSAEGR DFGKIAVLYR RQITGKAFQV SFRNRKIPFN
0701: VHGVAFYRKK AIKAIMAILR TTLPGCDDGP WRQALKTLLP GDKEEKKKII DHVEKISLAR KCSFISAATD IFSAKVSGTF KRTQITQGRK VLSTLYSLSK
0801: FVEREQSVSA VISSAGNMLP QQYLLEKRAV IDNDGGKLLN EDNDIRSVLQ FLMDDVSDFL STHFSSSGDA NQTEEKGCTA TLKAFIDYIS LRETENFRSR
0901: KEENKNSITL TTIHQSKGLE WDVVFIVQAN DSEIPLLHEY NGTVKEAGCT LEEERRLFYV AMTRARKKLY ILHVTVDSHR QLLLPSRFLR EIPGHLFDIQ
1001: GEGPATKYHE QPSGDISFDH AEGETSTEKP IVNQNETSPY PELMQSCLAN DFLKRFEIDD RAVVSHIFHH WAKRQAFQIP KRLLDKIKFV IDERLRGKGY
1101: KRKDVLCKLK SLLSDDEALG YAEYVIKWEQ IPIDKRSHLM RERQEHFQKQ RIENSMGSSE PTPKQISYLR SLGCTITPTS RLHASNLIEK YKSL
0001: MENLPPNRGM WNQEYSHGRI SQSFRSAKPL LDRKRPIENA PNSSNPLPQR MKESMDTESV SHNINFNSTP LMELSANTPY KRLKPEIESY ADGHPCGLRT
0101: PPPRFDLDKE IINGFQTDIY ADVGSLSEAF VTPLKEPERV TLSNGCSTSS ILDDDFDDSI LEEIDLICEQ SARKAACQTP TTSIYQTPSK DNKSSDPKAS
0201: LDFRDVEKFE PDSNVKLKLD EETPTIAADP ALLNSMPDEC SKYMLSLNDR QRDAACSNIS TPLMVIAGPG SGKTSTMVGR VLVLLNEGLL PSNILAMTFT
0301: KAATSEMRER IGKSAGKKAA KDITISTFHS FSLQLCRMHA DKLQRTSEFS VYGHGQQRRA IIEAVRLYEE EKKNGSKTSV PCESGEGLNG AGAGAVCPEY
0401: AKDLSKKWQK FVTQGKASGK SPEQCRKMGN EIGAKILGNY NDILKACDAL DYHDLISCSV TLLSDFPEVF KECQDTWKAI IVDEFQDTST MQYKLLRMLG
0501: SHNHITIVGD DDQSIFGFNG ADSSGFDSFR RDFPNYKEVR LIKNYRSSRH IVEAASSIIK NNTKRCQSKS ISSENSQGSK ITVKECHNEE AQCAYVIDKI
0601: IEITNDGSTP CCSHGDIAIL YRRQVSGKVF QNAFRQRKIP FNVHGVAFYR KKVVQVILAM LKTTFSECDD ASYRRVFKAL LPFEKEEKKR IIEHIEKIST
0701: SRKCSFISAA SDIFNAKISG TFKRSQLTQG RKVLQTLDMV AKLVDREQSL SAVVTCVANM IPQKYLLEQR AVVDNDGGKL LNEDNDLRSV LQYLMDDVAE
0801: FISTHCTTTE EEDAIKEKKG CNQLHSFINY ISERETENFR SRRRDNENSV TLTTIHQSKG LEWDIVFIVK ANENEIPLLH ESNGNASESG TSLEEERRLL
0901: YVAMTRARKK LFFLYVTVDS NWQVLQPSRF LKEIPGHLLQ GDMSVNDCRK VHENLPNKTE QSVSSFGTDI KHEESKLTDN DVMNIPEDYA SEESIAAYAL
1001: NGNNFLKRFD VEVRSVVSHL FHNWAKKQAF QEPKRLIDKV RFVIGERLAI KKNKHKDVLR ALKSSLTSEE AFQYAEHVLR WEQLPADTRA HIVREKQEHF
1101: QKLRIENSMG TSEATSKQIA FLHSLGCTVV PTSRLHASRL IEQYKSL
0101: PPPRFDLDKE IINGFQTDIY ADVGSLSEAF VTPLKEPERV TLSNGCSTSS ILDDDFDDSI LEEIDLICEQ SARKAACQTP TTSIYQTPSK DNKSSDPKAS
0201: LDFRDVEKFE PDSNVKLKLD EETPTIAADP ALLNSMPDEC SKYMLSLNDR QRDAACSNIS TPLMVIAGPG SGKTSTMVGR VLVLLNEGLL PSNILAMTFT
0301: KAATSEMRER IGKSAGKKAA KDITISTFHS FSLQLCRMHA DKLQRTSEFS VYGHGQQRRA IIEAVRLYEE EKKNGSKTSV PCESGEGLNG AGAGAVCPEY
0401: AKDLSKKWQK FVTQGKASGK SPEQCRKMGN EIGAKILGNY NDILKACDAL DYHDLISCSV TLLSDFPEVF KECQDTWKAI IVDEFQDTST MQYKLLRMLG
0501: SHNHITIVGD DDQSIFGFNG ADSSGFDSFR RDFPNYKEVR LIKNYRSSRH IVEAASSIIK NNTKRCQSKS ISSENSQGSK ITVKECHNEE AQCAYVIDKI
0601: IEITNDGSTP CCSHGDIAIL YRRQVSGKVF QNAFRQRKIP FNVHGVAFYR KKVVQVILAM LKTTFSECDD ASYRRVFKAL LPFEKEEKKR IIEHIEKIST
0701: SRKCSFISAA SDIFNAKISG TFKRSQLTQG RKVLQTLDMV AKLVDREQSL SAVVTCVANM IPQKYLLEQR AVVDNDGGKL LNEDNDLRSV LQYLMDDVAE
0801: FISTHCTTTE EEDAIKEKKG CNQLHSFINY ISERETENFR SRRRDNENSV TLTTIHQSKG LEWDIVFIVK ANENEIPLLH ESNGNASESG TSLEEERRLL
0901: YVAMTRARKK LFFLYVTVDS NWQVLQPSRF LKEIPGHLLQ GDMSVNDCRK VHENLPNKTE QSVSSFGTDI KHEESKLTDN DVMNIPEDYA SEESIAAYAL
1001: NGNNFLKRFD VEVRSVVSHL FHNWAKKQAF QEPKRLIDKV RFVIGERLAI KKNKHKDVLR ALKSSLTSEE AFQYAEHVLR WEQLPADTRA HIVREKQEHF
1101: QKLRIENSMG TSEATSKQIA FLHSLGCTVV PTSRLHASRL IEQYKSL
Arabidopsis Description
SRS2ATP-dependent DNA helicase SRS2-like protein At4g25120 [Source:UniProtKB/Swiss-Prot;Acc:D1KF50]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.