Factsheet for TraesCS2A01G389600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G389100.1	Wheat	nucleus	91.96	96.56
TraesCS2B01G409600.1	Wheat	nucleus	90.48	94.8
Os04t0544100-01	Rice	nucleus	55.36	66.35
TraesCS3A01G520700.1	Wheat	nucleus	18.95	66.32
EES12588	Sorghum	nucleus	52.98	59.93
Bra005362.1-P	Field mustard	nucleus	18.95	46.7
VIT_16s0013g00310.t01	Wine grape	nucleus	21.33	46.54
PGSC0003DMT400054167	Potato	nucleus	19.35	40.46
VIT_16s0013g00650.t01	Wine grape	nucleus	23.12	40.03
VIT_00s0309g00020.t01	Wine grape	nucleus	27.38	38.07
Solyc03g093740.1.1	Tomato	nucleus	11.41	37.46
KRG90121	Soybean	nucleus	19.05	34.78
Solyc03g093720.1.1	Tomato	nucleus	10.32	34.67
PGSC0003DMT400080404	Potato	nucleus, plastid	20.93	34.53
CDX89510	Canola	nucleus	25.89	34.43
CDY25627	Canola	nucleus	25.4	34.32
CDY31670	Canola	nucleus	23.61	33.19
CDX84255	Canola	nucleus	23.31	32.59
Bra030212.1-P	Field mustard	nucleus	25.0	31.82
AT2G22740.1	Thale cress	nucleus	24.7	31.52
PGSC0003DMT400092528	Potato	cytosol	6.55	30.84
AT2G35160.3	Thale cress	nucleus	24.21	30.73
PGSC0003DMT400080391	Potato	nucleus	13.0	29.18
TraesCS3A01G457800.1	Wheat	mitochondrion, nucleus	14.98	28.44
Solyc03g093710.1.1	Tomato	nucleus	23.21	27.92
TraesCS1A01G362000.1	Wheat	nucleus	18.65	27.81
TraesCS3A01G295200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	9.13	27.71
Solyc03g093760.1.1	Tomato	nucleus	21.83	27.6
TraesCS1A01G308300.1	Wheat	nucleus	18.25	27.3
TraesCS1A01G117300.1	Wheat	nucleus	25.6	27.24
PGSC0003DMT400054154	Potato	nucleus	22.92	27.24
TraesCS3A01G457900.1	Wheat	plastid	14.58	27.17
TraesCS2A01G235400.1	Wheat	nucleus	17.96	27.01
Solyc03g093700.1.1	Tomato	nucleus	22.12	26.58
PGSC0003DMT400054163	Potato	extracellular, nucleus	21.92	26.31
KRH77297	Soybean	nucleus	27.88	25.99
TraesCS5A01G140500.1	Wheat	nucleus	17.36	25.66
PGSC0003DMT400068351	Potato	nucleus	27.08	25.66
Solyc06g060960.1.1	Tomato	nucleus	26.79	25.59
TraesCS3A01G441200.1	Wheat	nucleus	17.46	25.51
PGSC0003DMT400080398	Potato	nucleus	22.12	25.34
TraesCS3A01G336100.1	Wheat	nucleus	18.65	25.23
KRH28192	Soybean	nucleus	27.58	25.14
Solyc08g077940.1.1	Tomato	nucleus	25.5	24.78
TraesCS1A01G042900.1	Wheat	nucleus	15.87	24.77
Solyc03g093770.1.1	Tomato	golgi, plasma membrane	9.92	24.69
TraesCS3A01G385200.1	Wheat	plastid	17.36	24.1
PGSC0003DMT400067504	Potato	nucleus	25.2	24.05
TraesCS5A01G194500.1	Wheat	plastid	27.58	23.99
TraesCS4A01G100900.1	Wheat	nucleus	15.38	23.07
TraesCS1A01G241600.2	Wheat	nucleus	18.55	22.83
TraesCS4A01G023500.1	Wheat	nucleus	17.76	21.46
KRH77260	Soybean	nucleus	9.92	20.53
TraesCS5A01G197900.1	Wheat	nucleus	19.74	20.06
KRH28232	Soybean	nucleus	9.42	19.43
TraesCS2A01G478800.1	Wheat	nucleus	9.13	15.33
TraesCS6A01G226600.1	Wheat	nucleus	10.02	14.83
TraesCS2A01G382000.5	Wheat	nucleus	9.62	14.33
TraesCS2A01G478000.1	Wheat	mitochondrion, nucleus	10.02	13.56
TraesCS6A01G274600.1	Wheat	nucleus	10.62	6.56

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:IPR001214	InterPro:IPR003105
InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR036987	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033
PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PANTHER:PTHR22884	PANTHER:PTHR22884:SF388
InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466
SMART:SM00468	SMART:SM00508	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697
EnsemblPlantsGene:TraesCS2A01G389600	EnsemblPlants:TraesCS2A01G389600.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:+:638305584..638308610

Molecular Weight (calculated)

109252.0 Da

IEP (calculated)

8.792

GRAVY (calculated)

-0.605

Length

1008 amino acids

Sequence
(BLAST)

0001: METGKAAVPP RATSGRRYKA LTPWRFQRGF VRYQAKTPAA AAAAPRGRAG APAGGSGTKR PRSSSVVGSG GRSAGDPMDG QSKKRSTRSA TMKRTDGENS
0101: ARSAGAGKDS QLRRSTRSAT MKNPGAEMDC LLRRATRSAT AKSSDGVKME NGACSGAGKD FPLKRHTRST AANSSHAIKM ENDSSSSAGK DFQIKRGTHR
0201: VTTRSSNGEK MDNNARTGAE MDCGLGKSSC NIMGDGLANA AGGDCRVTTR STNGEKMDNN ARTGAEMDCG LGKSSCNIMG DGLANAAGGD CCFEGPDYSG
0301: VLRDEHVQNF GTGGSVDAGD GAACIPEGIQ SNVGAENCES EGSEKSRVTG NVLKSNVSSA ADHVLEQPEG KGANTGNGAS KESDVAAKGC SSAVPGSNAN
0401: GPNCRRGRKE IVPWRFQIGY KRSFSKAFCS NGGSLETPEY RAQGSSTQCT PGTRSTVRCY ASPLSNVRVS AVRDFSSGKG EKETRTAYKK VKTEKDDDNQ
0501: GMPKNGVALA REKAIRSLRD FRLIYKNLLN KLEDRSREGG ADLQAYKIFR DRFLAQCNDE RFVGNVPGIN VGDIFYARVE LCIIGLHRPH RLGIDHIRKE
0601: DGTCIAVSIV AYALLSDVKD NFDALVYSGS RTATMNQKIE GTNLALKKSM DTKTPVRVIH GFTIHAKNSQ RKSILVYGGL YLVEKYWREK ESEDRYVYMF
0701: RMRRMAGQKH IDIDAIMKSE QAEPYDGVIM KDISQGLERI PVSVLNSISD EHPMPYIYMS RLKYPPNYQP APPAGCACVG GCSDSKLCAC VVKNGGEIPF
0801: NDKGCIIAAK PLVYECGPSC KCPPTCHNRV GQKGIKFRLQ VFKTKSMGWG VKTLDYIPSG SFVCEYIGEV LDDEEAQKRM TDEYLFAIGH NYYDESLWEG
0901: LSRSIPSLQN GPGKDEEAGF AVDASKMGNF AKFINHSCTP NLYAQNVLYD HDDKSAPHIM FFACEDIPPG QELVYHYNYA IDQVHDENGN IKKKKCLCGS
1001: VECDGWLY

Best Arabidopsis Sequence Match ( AT2G35160.1 )
(BLAST)

001: MVHSESSILS SLRGGDGGGI PCSKDELAIN GSYTDPMGRR KSKRFKVAAE SEFSPDFGSI TRQLRSRRMQ KEFTVETYET RNVSDVCVLS SQADVELIPG
101: EIVAERDSFK SVDCNDMSVG LTEGAESLGV NMQEPMKDRN MPENTSEQNM VEVHPPSISL PEEDMMGSVC RKSITGTKEL HGRTISVGRD LSPNMGSKFS
201: KNGKTAKRSI SVEEENLVLE KSDSGDHLGP SPEVLELEKS EVWIITDKGV VMPSPVKPSE KRNGDYGEGS MRKNSERVAL DKKRLASKFR LSNGGLPSCS
301: SSGDSARYKV KETMRLFHET CKKIMQEEEA RPRKRDGGNF KVVCEASKIL KSKGKNLYSG TQIIGTVPGV EVGDEFQYRM ELNLLGIHRP SQSGIDYMKD
401: DGGELVATSI VSSGGYNDVL DNSDVLIYTG QGGNVGKKKN NEPPKDQQLV TGNLALKNSI NKKNPVRVIR GIKNTTLQSS VVAKNYVYDG LYLVEEYWEE
501: TGSHGKLVFK FKLRRIPGQP ELPWKEVAKS KKSEFRDGLC NVDITEGKET LPICAVNNLD DEKPPPFIYT AKMIYPDWCR PIPPKSCGCT NGCSKSKNCA
601: CIVKNGGKIP YYDGAIVEIK PLVYECGPHC KCPPSCNMRV SQHGIKIKLE IFKTESRGWG VRSLESIPIG SFICEYAGEL LEDKQAESLT GKDEYLFDLG
701: DEDDPFTINA AQKGNIGRFI NHSCSPNLYA QDVLYDHEEI RIPHIMFFAL DNIPPLQELS YDYNYKIDQV YDSNGNIKKK FCYCGSAECS GRLY

Arabidopsis Description

SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.