Factsheet for TraesCS2A01G478000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, mitochondrion

Predictor Summary:

mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G477200.1	Wheat	mitochondrion, nucleus	95.17	96.07
TraesCS2B01G501300.2	Wheat	mitochondrion, nucleus	91.95	92.57
HORVU2Hr1G107560.8	Barley	mitochondrion, nucleus	87.11	89.27
TraesCS2A01G382000.5	Wheat	nucleus	42.15	46.38
CDX92067	Canola	nucleus	28.99	45.76
VIT_05s0049g01800.t01	Wine grape	nucleus	33.29	44.29
AT3G04380.1	Thale cress	nucleus	28.86	43.7
GSMUA_Achr1P20340_001	Banana	nucleus	41.48	43.52
KRG97025	Soybean	nucleus	16.51	43.31
KRH34133	Soybean	nucleus	37.18	40.38
KRH68776	Soybean	nucleus	36.38	40.03
PGSC0003DMT400051920	Potato	nucleus	27.11	39.69
CDY49341	Canola	nucleus	29.4	39.32
KRG92731	Soybean	nucleus	37.45	39.13
TraesCS2A01G478800.1	Wheat	nucleus	30.2	37.5
Bra036004.1-P	Field mustard	nucleus	30.74	36.64
TraesCS6A01G226600.1	Wheat	nucleus	33.15	36.27
CDY14903	Canola	nucleus	30.87	35.94
KRG95723	Soybean	nucleus	34.23	35.22
KRH32246	Soybean	nucleus	38.52	34.96
KRH19618	Soybean	nucleus	38.39	34.79
VIT_07s0005g04190.t01	Wine grape	mitochondrion, nucleus	39.19	34.43
Solyc09g072890.1.1	Tomato	nucleus	36.51	32.97
Solyc06g083760.2.1	Tomato	nucleus	37.99	32.87
CDX94744	Canola	nucleus	30.07	32.7
PGSC0003DMT400044180	Potato	nucleus	33.83	32.68
AT1G04050.1	Thale cress	nucleus	32.08	32.56
Solyc09g090630.1.1	Tomato	nucleus	34.36	32.24
CDY22319	Canola	nucleus	30.2	31.91
AT5G43990.9	Thale cress	nucleus	31.68	31.89
TraesCS3A01G520700.1	Wheat	nucleus	11.81	30.56
Bra033710.1-P	Field mustard	nucleus	30.07	29.87
Bra001104.1-P	Field mustard	nucleus	29.8	29.37
CDX96935	Canola	nucleus	30.87	29.34
CDY42922	Canola	plasma membrane, vacuole	29.26	26.33
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	29.8	23.57
TraesCS3A01G295200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	10.34	23.19
TraesCS5A01G140500.1	Wheat	nucleus	15.97	17.45
TraesCS3A01G457900.1	Wheat	plastid	11.81	16.27
TraesCS3A01G457800.1	Wheat	mitochondrion, nucleus	11.54	16.2
TraesCS1A01G308300.1	Wheat	nucleus	13.96	15.43
TraesCS1A01G362000.1	Wheat	nucleus	13.69	15.09
TraesCS2A01G235400.1	Wheat	nucleus	13.15	14.63
TraesCS3A01G441200.1	Wheat	nucleus	13.42	14.49
TraesCS3A01G385200.1	Wheat	plastid	14.09	14.46
TraesCS1A01G042900.1	Wheat	nucleus	11.95	13.78
TraesCS4A01G100900.1	Wheat	nucleus	12.35	13.69
TraesCS3A01G336100.1	Wheat	nucleus	13.42	13.42
TraesCS4A01G023500.1	Wheat	nucleus	14.23	12.71
TraesCS1A01G117300.1	Wheat	nucleus	15.57	12.25
TraesCS1A01G241600.2	Wheat	nucleus	12.48	11.36
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	13.56	10.02
TraesCS5A01G194500.1	Wheat	plastid	14.5	9.32
TraesCS5A01G197900.1	Wheat	nucleus	11.68	8.77
TraesCS6A01G274600.1	Wheat	nucleus	17.05	7.78
CDX92068	Canola	mitochondrion	0.0	0.0
CDY42923	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	Gene3D:1.10.8.850	MapMan:12.3.3.7	Gene3D:2.170.270.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:IPR001214	InterPro:IPR007728
InterPro:IPR025776	PFAM:PF00856	PFAM:PF05033	PFAM:PF10440	PFscan:PS50280	PFscan:PS50867
PFscan:PS51580	PANTHER:PTHR22884	PANTHER:PTHR22884:SF409	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317
SMART:SM00468	SUPFAM:SSF82199	InterPro:SUVR4/1/2	EnsemblPlantsGene:TraesCS2A01G478000	EnsemblPlants:TraesCS2A01G478000.1	InterPro:WIYLD_domain
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:716918177..716922069

Molecular Weight (calculated)

82882.2 Da

IEP (calculated)

6.417

GRAVY (calculated)

-0.606

Length

745 amino acids

Sequence
(BLAST)

001: MGSSRGNRNV RARRAVKAMK LLGISREQTA PVLRRLVELY DDNWQLIEAE SYRALADAIF DEQANGGPAN GGDQVQGQEE LDLELEETGT MPEMFTPEDD
101: DQRPSTSLAV VRKDPDNRIT APRSRTGSRA NPLGPDPTQA ASPTQTRALS KRRQMQMQMM DGDFQQPVFL REPKPEPVDM DAVDCLNVQP GLIHRSRKRS
201: APSSEFLALP PPEQTPTQIS EGDKNRTTQH CRNREMPTLS VEPANSTMNN GTGSGDGNVQ EAPCLDVDIA SSPRGDVKMS LKFCIDPSKF HMPALEAVLK
301: MVEDKCLRSH KVLPPDFSIR GLMTEMCQCV VQLGTKHTAE HNTQSDTVGN GSLSENAISR KRKARGEPLV SKGSESGPAN STLAQQHHLA LSVSKTIHDI
401: TDISKGEENV RISIADESGR EKCPPSFYYM PTNAVSQNAL VSMFLAKIGS EDCCPECFGN CLSAPAPCAC ARETGGEYAY TLDGLVKPAF IDECVSMNRF
501: PEEHHRVFCK TCPLERSRNK ASPEPCRGHL VRKFIKECWS KCGCNMQCGN RVVQRGIRCN LQVFFAEEGR GWGLRTLDDL PKGTFVCEYA GEILTNTELH
601: ERAIQNMQNA RYTHPILLDA GWCSGGEPKD EEALCLDGTF YGNVGRFINH RCCDANLAMI PVEVETPDHQ YYHVAFFTSK KVEAFEELTW DYGIDFDDER
701: QPMKPFECLC GSRYCRGGRR HLLRKERRRS RVTGTAGRAE VLEGC

Best Arabidopsis Sequence Match ( AT3G04380.2 )
(BLAST)

001: MISLSGLTSS VESDLDMQQA MLTNKDEKVL KALERTRQLD IPDEKTMPVL MKLLEEAGGN WSYIKLDNYT ALVDAIYSVE DENKQSEGSS NGSSIQVVQK
101: QPQLSNGDRK RKYKSRIADI TKGSESVKIP LVDDVGSEAV PKFTYIPHNI VYQSAYLHVS LARISDEDCC ANCKGNCLSA DFPCTCARET SGEYAYTKEG
201: LLKEKFLDTC LKMKKEPDSF PKVYCKDCPL ERDHDKGTYG KCDGHLIRKF IKECWRKCGC DMQCGNRVVQ RGIRCQLQVY FTQEGKGWGL RTLQDLPKGT
301: FICEYIGEIL TNTELYDRNV RSSSERHTYP VTLDADWGSE KDLKDEEALC LDATICGNVA RFINHRCEDA NMIDIPIEIE TPDRHYYHIA FFTLRDVKAM
401: DELTWDYMID FNDKSHPVKA FRCCCGSESC RDRKIKGSQG KSIERRKIVS AKKQQGSKEV SKKRK

Arabidopsis Description

SUVR4Histone-lysine N-methyltransferase SUVR4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W595]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.