Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plasma membrane 1
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G478100.1 | Wheat | nucleus | 94.33 | 94.65 |
| TraesCS2B01G503200.1 | Wheat | nucleus | 93.33 | 93.18 |
| TraesCS6A01G226600.1 | Wheat | nucleus | 74.5 | 65.64 |
| Zm00001d051126_P004 | Maize | nucleus | 50.33 | 59.57 |
| Os02t0621100-01 | Rice | nucleus | 63.67 | 51.55 |
| OQU85329 | Sorghum | nucleus | 55.67 | 49.26 |
| CDX92067 | Canola | nucleus | 34.83 | 44.28 |
| AT3G04380.1 | Thale cress | nucleus | 35.0 | 42.68 |
| PGSC0003DMT400051920 | Potato | nucleus | 35.17 | 41.45 |
| VIT_05s0049g01800.t01 | Wine grape | nucleus | 36.33 | 38.93 |
| GSMUA_Achr1P20340_001 | Banana | nucleus | 45.83 | 38.73 |
| CDY49341 | Canola | nucleus | 35.83 | 38.6 |
| KRH68776 | Soybean | nucleus | 40.5 | 35.89 |
| KRH34133 | Soybean | nucleus | 40.67 | 35.57 |
| KRG92731 | Soybean | nucleus | 41.33 | 34.78 |
| KRG97025 | Soybean | nucleus | 16.0 | 33.8 |
| TraesCS2A01G382000.5 | Wheat | nucleus | 38.0 | 33.68 |
| KRG95723 | Soybean | nucleus | 40.33 | 33.43 |
| Bra036004.1-P | Field mustard | nucleus | 33.83 | 32.48 |
| CDY14903 | Canola | nucleus | 34.17 | 32.03 |
| TraesCS3A01G520700.1 | Wheat | nucleus | 15.0 | 31.25 |
| PGSC0003DMT400044180 | Potato | nucleus | 39.83 | 31.0 |
| VIT_07s0005g04190.t01 | Wine grape | mitochondrion, nucleus | 43.67 | 30.9 |
| Solyc09g090630.1.1 | Tomato | nucleus | 40.0 | 30.23 |
| TraesCS2A01G478000.1 | Wheat | mitochondrion, nucleus | 37.5 | 30.2 |
| KRH19618 | Soybean | nucleus | 41.33 | 30.17 |
| AT5G43990.9 | Thale cress | nucleus | 37.17 | 30.14 |
| KRH32246 | Soybean | nucleus | 41.0 | 29.96 |
| Solyc09g072890.1.1 | Tomato | nucleus | 41.17 | 29.94 |
| Solyc06g083760.2.1 | Tomato | nucleus | 42.67 | 29.73 |
| CDX94744 | Canola | nucleus | 33.83 | 29.64 |
| AT1G04050.1 | Thale cress | nucleus | 35.83 | 29.29 |
| CDY22319 | Canola | nucleus | 34.33 | 29.22 |
| Bra001104.1-P | Field mustard | nucleus | 36.5 | 28.97 |
| Bra033710.1-P | Field mustard | nucleus | 34.5 | 27.6 |
| CDX96935 | Canola | nucleus | 34.33 | 26.28 |
| CDY42922 | Canola | plasma membrane, vacuole | 35.33 | 25.6 |
| TraesCS3A01G295200.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 14.0 | 25.3 |
| Bra040197.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 35.5 | 22.61 |
| TraesCS3A01G457900.1 | Wheat | plastid | 14.33 | 15.9 |
| TraesCS3A01G457800.1 | Wheat | mitochondrion, nucleus | 13.67 | 15.44 |
| TraesCS5A01G140500.1 | Wheat | nucleus | 16.83 | 14.81 |
| TraesCS3A01G385200.1 | Wheat | plastid | 17.83 | 14.74 |
| TraesCS3A01G441200.1 | Wheat | nucleus | 16.83 | 14.64 |
| TraesCS1A01G308300.1 | Wheat | nucleus | 16.33 | 14.54 |
| TraesCS1A01G362000.1 | Wheat | nucleus | 16.17 | 14.35 |
| TraesCS1A01G042900.1 | Wheat | nucleus | 14.33 | 13.31 |
| TraesCS3A01G336100.1 | Wheat | nucleus | 16.5 | 13.29 |
| TraesCS4A01G100900.1 | Wheat | nucleus | 14.5 | 12.95 |
| TraesCS4A01G023500.1 | Wheat | nucleus | 17.67 | 12.71 |
| TraesCS2A01G235400.1 | Wheat | nucleus | 14.17 | 12.69 |
| TraesCS1A01G241600.2 | Wheat | nucleus | 15.67 | 11.48 |
| TraesCS1A01G117300.1 | Wheat | nucleus | 17.17 | 10.88 |
| TraesCS2A01G389600.1 | Wheat | mitochondrion, nucleus | 15.33 | 9.13 |
| TraesCS5A01G197900.1 | Wheat | nucleus | 14.83 | 8.97 |
| TraesCS5A01G194500.1 | Wheat | plastid | 16.0 | 8.28 |
| TraesCS6A01G274600.1 | Wheat | nucleus | 18.33 | 6.74 |
| CDY42923 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX92068 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| KEGG:00310+2.1.1.43 | Gene3D:1.10.8.850 | MapMan:12.3.3.7 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 |
| GO:GO:0018024 | GO:GO:0019538 | GO:GO:0034968 | InterPro:IPR001214 | InterPro:IPR007728 | InterPro:IPR025776 |
| PFAM:PF00856 | PFAM:PF05033 | PFAM:PF10440 | PFscan:PS50280 | PFscan:PS50867 | PFscan:PS51580 |
| PANTHER:PTHR22884 | PANTHER:PTHR22884:SF459 | InterPro:Pre-SET_dom | InterPro:SET_dom | SMART:SM00317 | SMART:SM00468 |
| SUPFAM:SSF82199 | InterPro:SUVR4/1/2 | EnsemblPlantsGene:TraesCS2A01G478800 | EnsemblPlants:TraesCS2A01G478800.1 | InterPro:WIYLD_domain | SEG:seg |
Description
No Description!
Coordinates
chr2A:-:717208896..717213492
Molecular Weight (calculated)
67054.4 Da
IEP (calculated)
5.384
GRAVY (calculated)
-0.430
Length
600 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSKVCKER FDAAVTYLGA IGIQRETVSP VLTNLLDLYD HNWEFIEADH FRVLTDAIFD EPDPKEEQQR QANKRMNPDS DHCKKKLKIK HHSRKPTSKV
101: RVNEKTELTE GPLQQEAGKL CPQTVCATGN TLQLSFSRVP IEEINMENDV LKDTLTDEDS SALSLQGQEL PTFETPLAVM CPLVQDSSHQ RAYKDAHNQC
201: IELDYTYSGP RESGMLQIVP AMDFLSKPSV PNQAGSSCMP PSNSMIHGGI CPSSATAGEQ CSSSNMLVIA KPKGPAHDVN DITKGEEHVS IPIINEGGNG
301: ILPAPFHYIP RNITFQKAYV NLSLARIGDD NCCSDCFGDC LVEPLPCACA AETGGDFAYT RDGLLKEEFL NSCLSVLPKF YCKICSRERV KIVNSESPNA
401: KVNPCKGHPI RKFIKECWNK CGCARNCGNR VVQRGISRHL QVFLTPGEKG WGLRAAEELP RGAFICEYVG EILTNNELYE RNNQMVSNGK HTYPTLLDAD
501: WVTEDVLEDD HALCLDGTFY GNVARFINHR CSDANLIVIP VEIETPDHHY YHPAFFTTRQ IKPFEELTWD YGLDFDDVNH PVEAFKCCCG SEFCQDKRNI
101: RVNEKTELTE GPLQQEAGKL CPQTVCATGN TLQLSFSRVP IEEINMENDV LKDTLTDEDS SALSLQGQEL PTFETPLAVM CPLVQDSSHQ RAYKDAHNQC
201: IELDYTYSGP RESGMLQIVP AMDFLSKPSV PNQAGSSCMP PSNSMIHGGI CPSSATAGEQ CSSSNMLVIA KPKGPAHDVN DITKGEEHVS IPIINEGGNG
301: ILPAPFHYIP RNITFQKAYV NLSLARIGDD NCCSDCFGDC LVEPLPCACA AETGGDFAYT RDGLLKEEFL NSCLSVLPKF YCKICSRERV KIVNSESPNA
401: KVNPCKGHPI RKFIKECWNK CGCARNCGNR VVQRGISRHL QVFLTPGEKG WGLRAAEELP RGAFICEYVG EILTNNELYE RNNQMVSNGK HTYPTLLDAD
501: WVTEDVLEDD HALCLDGTFY GNVARFINHR CSDANLIVIP VEIETPDHHY YHPAFFTTRQ IKPFEELTWD YGLDFDDVNH PVEAFKCCCG SEFCQDKRNI
001: MISLSGLTSS VESDLDMQQA MLTNKDEKVL KALERTRQLD IPDEKTMPVL MKLLEEAGGN WSYIKLDNYT ALVDAIYSVE DENKQSEGSS NGNRGKNLKV
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK
Arabidopsis Description
SUVR4Histone-lysine N-methyltransferase SUVR4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W595]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.