Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G172200.1 | Wheat | cytosol | 95.15 | 95.4 |
| TraesCS2A01G165100.1 | Wheat | cytosol | 94.9 | 95.14 |
| HORVU2Hr1G030250.2 | Barley | cytosol | 87.76 | 88.43 |
| Os07t0620200-01 | Rice | cytosol, mitochondrion, nucleus | 67.09 | 66.41 |
| KXG36712 | Sorghum | cytosol | 60.2 | 54.25 |
| Zm00001d022168_P001 | Maize | cytosol, mitochondrion, peroxisome | 60.46 | 53.62 |
| TraesCS4B01G160100.1 | Wheat | cytosol | 48.47 | 47.38 |
| GSMUA_Achr10P... | Banana | cytosol | 41.58 | 38.72 |
| GSMUA_Achr1P21390_001 | Banana | cytosol | 39.29 | 38.21 |
| GSMUA_Achr3P06790_001 | Banana | cytosol | 31.38 | 37.85 |
| Bra009389.1-P | Field mustard | cytosol | 19.13 | 25.6 |
| CDY69792 | Canola | cytosol | 19.13 | 25.6 |
| CDY21586 | Canola | cytosol | 18.37 | 24.91 |
| AT5G09540.1 | Thale cress | nucleus | 17.35 | 24.29 |
| CDY31322 | Canola | cytosol | 22.96 | 24.13 |
| Bra031921.1-P | Field mustard | cytosol | 22.7 | 24.12 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 26.28 | 21.19 |
| KRH42098 | Soybean | nucleus | 24.23 | 20.88 |
| TraesCS5B01G242900.1 | Wheat | cytosol | 26.53 | 19.73 |
| Solyc07g007230.2.1 | Tomato | nucleus | 21.43 | 19.72 |
| Bra024289.1-P | Field mustard | nucleus | 22.96 | 19.61 |
| KRH49811 | Soybean | nucleus | 23.21 | 19.32 |
| AT5G64360.7 | Thale cress | nucleus | 22.45 | 18.97 |
| CDX84519 | Canola | nucleus | 22.7 | 18.74 |
| KRH10601 | Soybean | nucleus | 23.47 | 18.51 |
| CDY58269 | Canola | nucleus | 23.21 | 18.13 |
| KRH21766 | Soybean | nucleus | 21.17 | 16.63 |
| PGSC0003DMT400079004 | Potato | cytosol | 21.43 | 16.44 |
| CDY46799 | Canola | nucleus | 15.05 | 15.05 |
| Solyc11g006170.1.1 | Tomato | nucleus | 23.72 | 14.33 |
| PGSC0003DMT400073845 | Potato | cytosol | 23.21 | 13.96 |
| Solyc01g105780.2.1 | Tomato | nucleus | 25.0 | 13.67 |
| Solyc11g006140.1.1 | Tomato | nucleus | 20.15 | 13.28 |
| PGSC0003DMT400083794 | Potato | nucleus | 25.0 | 13.19 |
| CDY45966 | Canola | nucleus | 20.92 | 11.02 |
| CDY45473 | Canola | nucleus | 20.92 | 10.96 |
| Bra027007.1-P | Field mustard | nucleus | 20.66 | 10.86 |
| AT1G62970.1 | Thale cress | nucleus | 19.9 | 9.79 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G191300.1 | EnsemblPlantsGene:TraesCS2B01G191300 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR45496 | SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 | TIGR:cd06257 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:166610880..166612414
Molecular Weight (calculated)
41095.2 Da
IEP (calculated)
5.925
GRAVY (calculated)
-0.368
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSAGGGGG EPARSLEIAA KLLAARDLVG CKRFAEHAVD ADPLLPGADE LLAVADVHLA AQRLLPSGRP DPLAILQLQP NPDSADVKRA FRRLANLLAP
101: RRNPHPGADT ALRAVEEAFA HLSESTSTGT APAPAAPGGA SAAEDTFWTV CPHCCHVHQY ERLLVGRSLM CASAGCRRAF VATELPAAPP IVPGTDYYYC
201: AWGFIPMGFP KPADLSTDWK PFFPMPRDSS APQPASQPAP TDNFGKQNVG NNVGVGHTNA NAPPSNAHPG NKSAGGGTVA TGPPRGKIKK TAARKKVGGG
301: LKKHASGGVE SGIEPSLLGP DWSENAESGH TENSRGININ EVAKATDDSM MLHFGADGDI GFDLDVDASD DIMENLPDLP FLREDDNSRR MF
101: RRNPHPGADT ALRAVEEAFA HLSESTSTGT APAPAAPGGA SAAEDTFWTV CPHCCHVHQY ERLLVGRSLM CASAGCRRAF VATELPAAPP IVPGTDYYYC
201: AWGFIPMGFP KPADLSTDWK PFFPMPRDSS APQPASQPAP TDNFGKQNVG NNVGVGHTNA NAPPSNAHPG NKSAGGGTVA TGPPRGKIKK TAARKKVGGG
301: LKKHASGGVE SGIEPSLLGP DWSENAESGH TENSRGININ EVAKATDDSM MLHFGADGDI GFDLDVDASD DIMENLPDLP FLREDDNSRR MF
001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.