Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
No Homology Data
Protein Annotations
| EnsemblPlants:TraesCS2B01G202700.1 | EnsemblPlantsGene:TraesCS2B01G202700 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:Jas | InterPro:NINJA_B | InterPro:Ninja_fam | InterPro:Ninja_motif | ncoils:Coil | PANTHER:PTHR31413 |
| PANTHER:PTHR31413:SF9 | PFAM:PF07897 | PFAM:PF16135 | PFAM:PF16136 | SEG:seg | MapMan:15.5.53.3 |
Description
No Description!
Coordinates
chr2B:+:182569319..182570997
Molecular Weight (calculated)
31580.3 Da
IEP (calculated)
10.192
GRAVY (calculated)
-0.744
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRDFLGRF GGEKGSSSDK AGGGAGEPDE VVELSLGLSL GGCFGANSGR DAKKPRLVRS SSLAAMYSLP TETEEERWRR REMQSLKRLQ AKRKRLERRT
101: SMNSGKSGGS SSRDDAQEPL YPSAFQLRRS VVDQGNTSSS MPEQGSADGA EAKSTSSMEI SSDNNNNNNA SNQNKSLPPP APSPAGKLPN GIVKEQPPLR
201: TLRSLTMRTT STGDLRKSMM EDMPMVSSKV DGPNGKKIDG FLYKYRKGEE VRIVCVCHGN FLTPAEFVKH AGGGDVTNPL RHIVVNPAPS VFL
101: SMNSGKSGGS SSRDDAQEPL YPSAFQLRRS VVDQGNTSSS MPEQGSADGA EAKSTSSMEI SSDNNNNNNA SNQNKSLPPP APSPAGKLPN GIVKEQPPLR
201: TLRSLTMRTT STGDLRKSMM EDMPMVSSKV DGPNGKKIDG FLYKYRKGEE VRIVCVCHGN FLTPAEFVKH AGGGDVTNPL RHIVVNPAPS VFL
001: MGEASRQQRA WNREMTVTTN LSLDIDKYPR DLLRGFMSEN GGGRVFHGGE TNCDDESTIE LNLGLSLGGR FGVDKTPRKL KRSSSVLDTV PFNDSTVAEP
101: ENYTVGLERT TSLPAEMEEE WRKRKEMQSL RRMEAKRRRC EKQSFRVGNS DDQTVSFENE RWVTASKSGF LQRHLVSSNR QVCGVDSDGG GATGGGSSSS
201: LSELDNKNQQ GSSNSCNDER SPKIVAGCSS NSGSQGTERP SVTRANKVNE NENEKRVRSE DSVDRKGKGM ATSTGLVDMP CVFTKGDGPN GRRVDGILYK
301: YGKGEEVRIM CICHGSFLTP AEFVKHGGGG DVDRPLRHIV VNTSSSTF
101: ENYTVGLERT TSLPAEMEEE WRKRKEMQSL RRMEAKRRRC EKQSFRVGNS DDQTVSFENE RWVTASKSGF LQRHLVSSNR QVCGVDSDGG GATGGGSSSS
201: LSELDNKNQQ GSSNSCNDER SPKIVAGCSS NSGSQGTERP SVTRANKVNE NENEKRVRSE DSVDRKGKGM ATSTGLVDMP CVFTKGDGPN GRRVDGILYK
301: YGKGEEVRIM CICHGSFLTP AEFVKHGGGG DVDRPLRHIV VNTSSSTF
Arabidopsis Description
AFP2AFP2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.