Factsheet for TraesCS2B01G409600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 3
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G389100.1	Wheat	nucleus	95.11	95.31
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	94.8	90.48
Os04t0544100-01	Rice	nucleus	57.48	65.76
EES12588	Sorghum	nucleus	54.99	59.37
TraesCS3B01G590300.1	Wheat	nucleus	34.1	52.23
VIT_16s0013g00310.t01	Wine grape	nucleus	22.56	46.97
Bra005362.1-P	Field mustard	nucleus	19.85	46.7
PGSC0003DMT400054167	Potato	nucleus	20.37	40.66
VIT_16s0013g00650.t01	Wine grape	nucleus	24.53	40.55
VIT_00s0309g00020.t01	Wine grape	nucleus	28.9	38.34
Solyc03g093740.1.1	Tomato	nucleus	12.06	37.78
Solyc03g093720.1.1	Tomato	nucleus	10.91	35.0
PGSC0003DMT400080404	Potato	nucleus, plastid	22.14	34.86
CDX89510	Canola	nucleus	27.44	34.83
KRG90121	Soybean	nucleus	19.96	34.78
CDY25627	Canola	nucleus	26.72	34.45
CDY31670	Canola	nucleus	24.74	33.19
CDX84255	Canola	nucleus	24.43	32.59
Bra030212.1-P	Field mustard	nucleus	26.4	32.07
PGSC0003DMT400092528	Potato	cytosol	7.07	31.78
AT2G22740.1	Thale cress	nucleus	25.99	31.65
AT2G35160.3	Thale cress	nucleus	25.26	30.6
PGSC0003DMT400080391	Potato	nucleus	14.03	30.07
Solyc03g093710.1.1	Tomato	nucleus	24.53	28.16
TraesCS1B01G378900.1	Wheat	nucleus	19.65	28.04
Solyc03g093760.1.1	Tomato	nucleus	23.08	27.85
TraesCS3B01G342100.1	Wheat	nucleus	9.56	27.71
PGSC0003DMT400054154	Potato	nucleus	24.12	27.36
TraesCS1B01G319000.1	Wheat	nucleus	18.82	26.85
Solyc03g093700.1.1	Tomato	nucleus	23.39	26.82
KRH77297	Soybean	nucleus	29.83	26.55
PGSC0003DMT400054163	Potato	extracellular, nucleus	23.18	26.55
TraesCS2B01G254700.1	Wheat	nucleus	18.5	26.45
Solyc06g060960.1.1	Tomato	nucleus	28.59	26.07
PGSC0003DMT400068351	Potato	nucleus	28.79	26.03
KRH28192	Soybean	nucleus	29.63	25.77
PGSC0003DMT400080398	Potato	nucleus	23.28	25.45
Solyc03g093770.1.1	Tomato	golgi, plasma membrane	10.6	25.19
Solyc08g077940.1.1	Tomato	nucleus	27.13	25.17
TraesCS3B01G367200.1	Wheat	nucleus	19.33	25.03
TraesCS3B01G366900.1	Wheat	nucleus	19.33	25.03
TraesCS5B01G190000.1	Wheat	plastid	29.63	24.98
TraesCS3B01G475200.1	Wheat	nucleus	17.05	24.96
TraesCS5B01G138800.1	Wheat	nucleus	18.3	24.79
TraesCS1B01G055800.1	Wheat	nucleus	16.42	24.65
PGSC0003DMT400067504	Potato	nucleus	26.82	24.43
TraesCS3B01G498000.1	Wheat	nucleus	16.11	24.11
TraesCS3B01G498100.1	Wheat	nucleus	15.49	23.69
TraesCS4B01G280000.1	Wheat	nucleus	17.78	23.59
TraesCS4B01G203900.1	Wheat	nucleus	15.9	22.6
TraesCS3B01G417400.1	Wheat	nucleus	18.4	21.25
TraesCS1B01G137100.1	Wheat	nucleus, plastid	29.21	21.16
KRH77260	Soybean	nucleus	10.6	20.94
KRH28232	Soybean	nucleus	10.08	19.84
TraesCS5B01G185700.3	Wheat	nucleus	22.14	19.21
TraesCS2B01G503200.1	Wheat	nucleus	9.98	15.97
TraesCS6B01G255000.1	Wheat	nucleus	10.71	15.12
TraesCS2B01G501300.2	Wheat	mitochondrion, nucleus	10.71	13.92
TraesCS2B01G399300.4	Wheat	nucleus	9.77	13.88
TraesCS2B01G616200.1	Wheat	nucleus	10.39	13.57
TraesCS6B01G302100.2	Wheat	nucleus	11.33	6.72

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:IPR001214
InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR036987	PFAM:PF00856	PFAM:PF02182
PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PANTHER:PTHR22884
PANTHER:PTHR22884:SF388	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317
SMART:SM00466	SMART:SM00468	SMART:SM00508	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199
SUPFAM:SSF88697	EnsemblPlantsGene:TraesCS2B01G409600	EnsemblPlants:TraesCS2B01G409600.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr2B:-:583065711..583068599

Molecular Weight (calculated)

104680.0 Da

IEP (calculated)

9.068

GRAVY (calculated)

-0.603

Length

962 amino acids

Sequence
(BLAST)

001: METGEAAVQG GRRTTSGRRY KALMPWRFQR GFVRNQAKSP AAAPIGRGGA PSGGSGAKRS RSASVVGSGG RSAGDPSDVQ SKKRSTRSAT MKRTDGENSA
101: RSAGAGKDSQ LRRSTRSATM KNSSAEMDCL LRRGTRSEAA KSSGGVKLEN GACSGAGKDL PFKRHTRSTA VNSSHAIKME NDSPSSAGKD FQIKRGTHRV
201: TTRSSNREKI DNNARTGAEM ECGLGKSSCN IMGDGLANAA GGDCCFEGPD YSGVLRDEHV QNFGTGGSVG AGDGAACIPE GIQSNVGAEN CESEGSKKSR
301: VTGNGLKSNI SSAADHVLEQ PEGKGANTGN GASKESDVAA KGCSSAVPGS NANDPNCRRG RKVISPWRFQ IGYKRSFSKA FCSNGGSLET PEYSAQGSST
401: QCTPGTRSTV RCYASPLSNV RVSAVRDFSS GKGEKETRAA YKKVKTEKDD DNQGMPKNGV ALAREKVIRS LRDFRLIYKN LLNKLEDKSR EGGADLQAYK
501: IFRDRFLAQC NDERFVGNVP GIHVGDIFYA RVELCIIGLH RPHRLGIDHI RKEDGTCIAV SIVAYALLSD VKDNFDALVY SGSRTATMNQ KIEGTNLALK
601: KSMDTKTPVR VIHGFTIHAK RNSQRKSILL YGGLYLVEKY WREKESEDRY VYMFRMRRMA GQKHIDIEAI MKSEQAEPYD GVIMKDISQG LERIPISVLN
701: SISDEHPMPY IYMSRLKYPP NYQPAPPAGC ACVGGCSDSK LCACVVKNGG EIPFNDKGCI IAAKPLVYEC GPSCKCPPTC HNRVGQKGIK FRLQVFKTKS
801: MGWGVKTLNY IPSGSFVCEY IGEVLDDEEA QKRMTDEYLF AIGHNYYDES LWEGLSRSIP SLQNGPGKDE ETGFAVDASK MGNFAKFINH SCTPNLYAQN
901: VLYDHDDKSA PHIMFFACED IPPGQELVYH YNYAIDQVHD ENGNIKKKKC LCGSVECDGW LY

Best Arabidopsis Sequence Match ( AT2G35160.1 )
(BLAST)

001: MVHSESSILS SLRGGDGGGI PCSKDELAIN GSYTDPMGRR KSKRFKVAAE SEFSPDFGSI TRQLRSRRMQ KEFTVETYET RNVSDVCVLS SQADVELIPG
101: EIVAERDSFK SVDCNDMSVG LTEGAESLGV NMQEPMKDRN MPENTSEQNM VEVHPPSISL PEEDMMGSVC RKSITGTKEL HGRTISVGRD LSPNMGSKFS
201: KNGKTAKRSI SVEEENLVLE KSDSGDHLGP SPEVLELEKS EVWIITDKGV VMPSPVKPSE KRNGDYGEGS MRKNSERVAL DKKRLASKFR LSNGGLPSCS
301: SSGDSARYKV KETMRLFHET CKKIMQEEEA RPRKRDGGNF KVVCEASKIL KSKGKNLYSG TQIIGTVPGV EVGDEFQYRM ELNLLGIHRP SQSGIDYMKD
401: DGGELVATSI VSSGGYNDVL DNSDVLIYTG QGGNVGKKKN NEPPKDQQLV TGNLALKNSI NKKNPVRVIR GIKNTTLQSS VVAKNYVYDG LYLVEEYWEE
501: TGSHGKLVFK FKLRRIPGQP ELPWKEVAKS KKSEFRDGLC NVDITEGKET LPICAVNNLD DEKPPPFIYT AKMIYPDWCR PIPPKSCGCT NGCSKSKNCA
601: CIVKNGGKIP YYDGAIVEIK PLVYECGPHC KCPPSCNMRV SQHGIKIKLE IFKTESRGWG VRSLESIPIG SFICEYAGEL LEDKQAESLT GKDEYLFDLG
701: DEDDPFTINA AQKGNIGRFI NHSCSPNLYA QDVLYDHEEI RIPHIMFFAL DNIPPLQELS YDYNYKIDQV YDSNGNIKKK FCYCGSAECS GRLY

Arabidopsis Description

SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.