Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 5
- extracellular 5
- endoplasmic reticulum 5
- golgi 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G519700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 72.5 | 70.24 |
| TraesCS2A01G518100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 72.86 | 69.86 |
| Zm00001d026436_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 37.86 | 51.96 |
| EES12957 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 38.93 | 50.23 |
| Os04t0644400-01 | Rice | nucleus | 31.79 | 48.9 |
| Zm00001d002094_P001 | Maize | extracellular, plastid | 35.36 | 48.77 |
| PGSC0003DMT400079355 | Potato | extracellular | 22.5 | 45.99 |
| KRH03647 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 30.71 | 45.26 |
| Solyc07g007860.1.1 | Tomato | extracellular | 21.79 | 44.2 |
| KRH20158 | Soybean | endoplasmic reticulum | 33.21 | 40.97 |
| PGSC0003DMT400007468 | Potato | extracellular | 33.57 | 39.0 |
| HORVU2Hr1G114680.2 | Barley | endoplasmic reticulum | 57.86 | 38.66 |
| TraesCS2B01G444500.1 | Wheat | extracellular | 22.5 | 38.41 |
| TraesCS7B01G436600.1 | Wheat | extracellular | 26.43 | 35.92 |
| VIT_11s0016g05840.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 33.93 | 35.71 |
| Bra037196.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 31.43 | 34.65 |
| CDX81428 | Canola | endoplasmic reticulum, plasma membrane | 31.07 | 33.98 |
| Solyc12g009650.1.1 | Tomato | nucleus | 32.14 | 33.96 |
| AT2G10940.2 | Thale cress | endoplasmic reticulum, plasma membrane | 32.5 | 31.27 |
| CDY18576 | Canola | endoplasmic reticulum, plasma membrane | 30.36 | 30.36 |
| TraesCS7B01G436700.1 | Wheat | plasma membrane | 30.71 | 29.25 |
| TraesCS7B01G031800.1 | Wheat | extracellular | 24.29 | 21.18 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:35.2 | InterPro:Bifun_inhib/LTP/seed_sf | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0009506 | GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 |
| GO:GO:0009579 | GO:GO:0016020 | GO:GO:0048046 | InterPro:Hydrophob_seed | PFAM:PF14547 | PRINTS:PR01217 |
| PFscan:PS51257 | PANTHER:PTHR31731 | PANTHER:PTHR31731:SF20 | SUPFAM:SSF47699 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS2B01G546700 |
| EnsemblPlants:TraesCS2B01G546700.1 | TIGR:cd01958 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2B:+:743726671..743727513
Molecular Weight (calculated)
26596.1 Da
IEP (calculated)
8.155
GRAVY (calculated)
0.743
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MESTKLSALL VLAMLALSSP TVVLACSPAS GCSSTPSTGT PSAGGITIPD VGGVVGTVTP VIGGAVPTVG GVVGKVTPVV GGAVPTVGGV VGKVTPVVGK
101: VTPVVGGAVP AVGGIVSPVV GTVGGVVGGV PVVGGVVTPV ISPVIGVVAP IIGGSPSPKS RHGGRKACPP SPPTPTPSPP TPAPTPPTPT PSPTPSSDTC
201: PIDTLKLGVC LDLLGNELHI GDASVKCCPL VQGIAGLTAV ACLCTAIKAK VLNLALYVPL ALQLLVNDCG CAVPPGYTCA
101: VTPVVGGAVP AVGGIVSPVV GTVGGVVGGV PVVGGVVTPV ISPVIGVVAP IIGGSPSPKS RHGGRKACPP SPPTPTPSPP TPAPTPPTPT PSPTPSSDTC
201: PIDTLKLGVC LDLLGNELHI GDASVKCCPL VQGIAGLTAV ACLCTAIKAK VLNLALYVPL ALQLLVNDCG CAVPPGYTCA
0001: MGFRTRNLSF LILLLLNFFA ATYARECSPP KPSPKPHKPP KHSVVPPKPP AVKPHPHPKP PTIKPPPPKR HPHPKPPTVK PHPHPKPPTK PHPHPKPPTK
0101: PHPHPKPPTI KPPPHPKPRP HPKPPNVKPH PHPKPPTKPH PHPKPPTKHH PHPKPPTIKP PPKPPSVKPP PSTPKPPTTN PPPSTPQPPT HKPPPCTPTP
0201: PVASPPMATP PTQMPPIATP PIAKSPVATP PIATPPTATP PITIPPVATP PITTPPIANP PIIMPPIATP PVAAPPITNP PISKPPVTTP PTTTPPIAKP
0301: PIATPPISTP PAATPPAATP PITTLPPAKP PVAISPIVTP PVTPIAQPPV ATPPTATPPV ATPPIATPPT SKSPISTPPI SESPVATPPT ATSPIKTPPP
0401: AKPPVATPPI AKSPIATPPT ATPPVATPPI EKPPVATPPT TTPPTATPPV AKPPVETPPI ATPPTAKPPI STPPISKPPV ATPPAATPPI TTPTPVKPPV
0501: ATPPLAIPPV AKPPVVTPPT ATPPIATPPI AKSPVATPPT ATPPVATPPI AKPPVVTPPT TTPPTATPPV AKPPVATPPI ATPPTAKPPI STPPISKSPV
0601: ATPPAATPPI TTPPPAKPPV ATPPIATPPI AKPPVATPPT ATPPIATSPV AKPPVATPPI KTPPPAKPPV AIPPIATPPV AKPPVATPPT ATPPIATPPI
0701: ATPPVVTPPT ATPPVATPPI AKPPTTIPPT ATPPVAMPPI ATPPTAKPPI ATPPIAIPPV AKPPVVTPPT ATPPIATPPI AKSPVATPPT ATPPVATPPI
0801: AKPPVATPPT TAPPTATPPV AKPPVATPPI ATPPTAKPPI LTPPISKPPV ATPPAATPPI TTPPPAKPPV ATPPIATPPI AKPPVATPPT ATPPIATSPV
0901: AKPPVAIPPI KTPPPAKPPV AIPPIATPPV AKPPVATPPT ATPPIATSPI ATPPVVTPPT ATSPVATPPI AKPPTTTPPT ATPPVAMPPI ATPPTAKPPV
1001: ATPPIANPPV EKPPVATPPI AKPPTVLPPI AKPPVETSPT ATPPTATPPV AIPPVVKPPV AIPPITKPPV ATPPVTNPPT AMPPIVTPPP IVTPPIAKSP
1101: IATPPVSTPP IAKPPIATPP VATTPIAKPP IATPPTANPP VANPPIAKSP IAKPPIATPP TAMPSIATPP IGKPPVATPP MAKPPVASPP IATPPIIKPP
1201: VATPPITKPP VATPPVATPP IAKPPVATSP IETPPVAKPP VTTPPVATPP IVKPPIVTPP IATPPIAKSP IAPPPIGTPP IAKPPVATPP TATPPVATSP
1301: IAKPPVATPP PATPPVAKPP VATPPTVTPP VATPPIAKPP GARPPVATPP VATPPIAKSP VATPPMTKPP VASSPIATPP IAKTPIATPP TTMPKTCPID
1401: TLKLGSCVDL LGGLVHIGIG KSAKEKCCPV VEGLVDLDAA VCLCTTIKAK LLNIDVILPI ALEVLLNCGK NPPPGFKCPA
0101: PHPHPKPPTI KPPPHPKPRP HPKPPNVKPH PHPKPPTKPH PHPKPPTKHH PHPKPPTIKP PPKPPSVKPP PSTPKPPTTN PPPSTPQPPT HKPPPCTPTP
0201: PVASPPMATP PTQMPPIATP PIAKSPVATP PIATPPTATP PITIPPVATP PITTPPIANP PIIMPPIATP PVAAPPITNP PISKPPVTTP PTTTPPIAKP
0301: PIATPPISTP PAATPPAATP PITTLPPAKP PVAISPIVTP PVTPIAQPPV ATPPTATPPV ATPPIATPPT SKSPISTPPI SESPVATPPT ATSPIKTPPP
0401: AKPPVATPPI AKSPIATPPT ATPPVATPPI EKPPVATPPT TTPPTATPPV AKPPVETPPI ATPPTAKPPI STPPISKPPV ATPPAATPPI TTPTPVKPPV
0501: ATPPLAIPPV AKPPVVTPPT ATPPIATPPI AKSPVATPPT ATPPVATPPI AKPPVVTPPT TTPPTATPPV AKPPVATPPI ATPPTAKPPI STPPISKSPV
0601: ATPPAATPPI TTPPPAKPPV ATPPIATPPI AKPPVATPPT ATPPIATSPV AKPPVATPPI KTPPPAKPPV AIPPIATPPV AKPPVATPPT ATPPIATPPI
0701: ATPPVVTPPT ATPPVATPPI AKPPTTIPPT ATPPVAMPPI ATPPTAKPPI ATPPIAIPPV AKPPVVTPPT ATPPIATPPI AKSPVATPPT ATPPVATPPI
0801: AKPPVATPPT TAPPTATPPV AKPPVATPPI ATPPTAKPPI LTPPISKPPV ATPPAATPPI TTPPPAKPPV ATPPIATPPI AKPPVATPPT ATPPIATSPV
0901: AKPPVAIPPI KTPPPAKPPV AIPPIATPPV AKPPVATPPT ATPPIATSPI ATPPVVTPPT ATSPVATPPI AKPPTTTPPT ATPPVAMPPI ATPPTAKPPV
1001: ATPPIANPPV EKPPVATPPI AKPPTVLPPI AKPPVETSPT ATPPTATPPV AIPPVVKPPV AIPPITKPPV ATPPVTNPPT AMPPIVTPPP IVTPPIAKSP
1101: IATPPVSTPP IAKPPIATPP VATTPIAKPP IATPPTANPP VANPPIAKSP IAKPPIATPP TAMPSIATPP IGKPPVATPP MAKPPVASPP IATPPIIKPP
1201: VATPPITKPP VATPPVATPP IAKPPVATSP IETPPVAKPP VTTPPVATPP IVKPPIVTPP IATPPIAKSP IAPPPIGTPP IAKPPVATPP TATPPVATSP
1301: IAKPPVATPP PATPPVAKPP VATPPTVTPP VATPPIAKPP GARPPVATPP VATPPIAKSP VATPPMTKPP VASSPIATPP IAKTPIATPP TTMPKTCPID
1401: TLKLGSCVDL LGGLVHIGIG KSAKEKCCPV VEGLVDLDAA VCLCTTIKAK LLNIDVILPI ALEVLLNCGK NPPPGFKCPA
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIE8]
SUBAcon: [plasma membrane,vacuole,extracellular]
SUBAcon: [plasma membrane,vacuole,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.