Factsheet for TraesCS2B01G616200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G137800.1	Wheat	nucleus	51.97	91.85
TraesCS2D01G566400.1	Wheat	nucleus	86.97	86.97
HORVU2Hr1G127700.1	Barley	nucleus	71.1	74.12
HORVU2Hr1G127770.1	Barley	nucleus	64.99	67.75
TraesCS2B01G501300.2	Wheat	mitochondrion, nucleus	58.89	58.65
EES13161	Sorghum	nucleus	48.17	45.05
TraesCS2B01G399300.4	Wheat	nucleus	40.3	43.87
CDX92067	Canola	nucleus	28.09	43.86
VIT_05s0049g01800.t01	Wine grape	nucleus	32.29	42.5
KRG97025	Soybean	nucleus	16.28	42.25
AT3G04380.1	Thale cress	nucleus	28.09	42.07
Zm00001d002938_P001	Maize	nucleus	39.35	40.79
GSMUA_Achr1P20340_001	Banana	nucleus	39.21	40.7
PGSC0003DMT400051920	Potato	nucleus	27.27	39.49
KRH34133	Soybean	nucleus	36.09	38.78
CDY49341	Canola	nucleus	28.49	37.7
KRH68776	Soybean	nucleus	34.19	37.22
KRG92731	Soybean	nucleus	35.96	37.17
TraesCS6B01G255000.1	Wheat	nucleus	33.92	36.71
TraesCS2B01G503200.1	Wheat	nucleus	29.04	35.61
Bra036004.1-P	Field mustard	nucleus	29.85	35.2
CDY14903	Canola	nucleus	29.99	34.53
KRG95723	Soybean	nucleus	32.02	32.6
KRH32246	Soybean	nucleus	36.23	32.52
VIT_07s0005g04190.t01	Wine grape	mitochondrion, nucleus	37.18	32.31
KRH19618	Soybean	nucleus	35.82	32.12
Solyc06g083760.2.1	Tomato	nucleus	37.45	32.06
CDX94744	Canola	nucleus	29.72	31.97
CDY22319	Canola	nucleus	29.99	31.35
PGSC0003DMT400044180	Potato	nucleus	32.02	30.61
AT5G43990.9	Thale cress	nucleus	30.66	30.54
AT1G04050.1	Thale cress	nucleus	30.39	30.52
Solyc09g072890.1.1	Tomato	nucleus	34.06	30.42
Solyc09g090630.1.1	Tomato	nucleus	32.29	29.97
Bra033710.1-P	Field mustard	nucleus	29.72	29.2
CDX96935	Canola	nucleus	30.12	28.32
Bra001104.1-P	Field mustard	nucleus	28.36	27.65
CDY42922	Canola	plasma membrane, vacuole	27.82	24.76
TraesCS3B01G342100.1	Wheat	nucleus	10.85	24.1
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	28.36	22.19
TraesCS3B01G590300.1	Wheat	nucleus	14.79	17.36
TraesCS3B01G475200.1	Wheat	nucleus	14.52	16.29
TraesCS5B01G138800.1	Wheat	nucleus	15.47	16.06
TraesCS1B01G319000.1	Wheat	nucleus	14.65	16.02
TraesCS1B01G378900.1	Wheat	nucleus	14.52	15.88
TraesCS4B01G280000.1	Wheat	nucleus	14.11	14.34
TraesCS3B01G498100.1	Wheat	nucleus	12.08	14.15
TraesCS3B01G498000.1	Wheat	nucleus	12.21	14.0
TraesCS2B01G254700.1	Wheat	nucleus	12.08	13.22
TraesCS4B01G203900.1	Wheat	nucleus	12.08	13.15
TraesCS1B01G055800.1	Wheat	nucleus	11.26	12.95
TraesCS3B01G367200.1	Wheat	nucleus	12.75	12.65
TraesCS3B01G366900.1	Wheat	nucleus	12.75	12.65
TraesCS3B01G417400.1	Wheat	nucleus	13.98	12.36
TraesCS2B01G409600.1	Wheat	nucleus	13.57	10.39
TraesCS5B01G190000.1	Wheat	plastid	13.16	8.5
TraesCS5B01G185700.3	Wheat	nucleus	12.48	8.3
TraesCS1B01G137100.1	Wheat	nucleus, plastid	14.25	7.91
TraesCS6B01G302100.2	Wheat	nucleus	16.55	7.52
CDX92068	Canola	mitochondrion	0.0	0.0
CDY42923	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	Gene3D:1.10.8.850	MapMan:12.3.3.7	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740
GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR007728
InterPro:IPR025776	PFAM:PF00856	PFAM:PF05033	PFAM:PF10440	PFscan:PS50280	PFscan:PS50867
PFscan:PS50868	PFscan:PS51580	PANTHER:PTHR22884	PANTHER:PTHR22884:SF409	InterPro:Post-SET_dom	InterPro:Pre-SET_dom
InterPro:SET_dom	SMART:SM00317	SMART:SM00468	SUPFAM:SSF82199	InterPro:SUVR4/1/2	EnsemblPlantsGene:TraesCS2B01G616200
EnsemblPlants:TraesCS2B01G616200.1	InterPro:WIYLD_domain	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2B:-:793577867..793581591

Molecular Weight (calculated)

80088.3 Da

IEP (calculated)

7.833

GRAVY (calculated)

-0.579

Length

737 amino acids

Sequence
(BLAST)

001: MVGRNEEKAR LALAAMNKLG FGRKQATPVL KRLFRLFDRQ WEPIEADSYR ALAEAILDDQ LQSQSQSQPQ HQPNGGSGGG GGGNEAPGQE EELDGMPEIS
101: TPSTTPSFRA TPPQSSSSRT HFRAPASASA PPPGSTARGI VERVVLAPAP GAPSPTALLT KHKQMMDAEF QQPAFFPKHP NPQPPQPVDM DASGCWDVQP
201: GLILRSRNRN RNRNASSSSE FNAVPPPDRD RNPHHISGSD KNRAIQHHNR NAEMPAVSVE PTSSSTLING TGSQVQEIDV ASSPGGEVKL SLKCSADPSK
301: LNMPDLEAVY KMVEDKYHCS DKLLPPDFSI PGLMAEICQS VVQLGTQHTV EHITQSRTVG NGSTSKCVEG GSASSTTAPQ PHSALSRTTH DVHDISKGQE
401: NVKIPIANES GRGKCPPSFS YVPGNEVFQN GIVNISLAQI GAEDCCADCF GDCLSAPVPC ACARVTGGAY AYTPGGLVKP DFIDKCVSMN RVPEAHHKVF
501: CKTCPLERSR DKASPEPCRG HLVRKFIKEC WSKCGCSMRC GNRVVQRGIR FNLEVFSTGN GRGWGLRTQN ALPKGAFVCE YAGEILTCAE VHERAVENMK
601: NARYTHAVVL DAGWSSGGSL KDEEALCLDG TFYGNVGRFI NHRCRDSNLA MVPVQVETPD RHYYHVAFFT SRKVEALEEL TWDYGIDFDE ELGPVKVFEC
701: LCGSKYCRGS RRHRQRLRNG NGNGTGKKRS RGDPGQD

Best Arabidopsis Sequence Match ( AT3G04380.1 )
(BLAST)

001: MISLSGLTSS VESDLDMQQA MLTNKDEKVL KALERTRQLD IPDEKTMPVL MKLLEEAGGN WSYIKLDNYT ALVDAIYSVE DENKQSEGSS NGNRGKNLKV
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK

Arabidopsis Description

SUVR4Histone-lysine N-methyltransferase SUVR4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W595]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.