Factsheet for TraesCS2D01G172200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G165100.1	Wheat	cytosol	97.95	97.95
TraesCS2B01G191300.1	Wheat	cytosol	95.4	95.15
HORVU2Hr1G030250.2	Barley	cytosol	86.96	87.4
Os07t0620200-01	Rice	cytosol, mitochondrion, nucleus	65.47	64.65
KXG36712	Sorghum	cytosol	59.85	53.79
Zm00001d022168_P001	Maize	cytosol, mitochondrion, peroxisome	60.1	53.17
TraesCS4D01G156000.1	Wheat	nucleus	49.36	48.13
GSMUA_Achr10P...	Banana	cytosol	42.2	39.19
GSMUA_Achr1P21390_001	Banana	cytosol	39.64	38.46
GSMUA_Achr3P06790_001	Banana	cytosol	31.46	37.85
TraesCS1D01G139900.1	Wheat	plastid	16.88	32.2
Bra009389.1-P	Field mustard	cytosol	18.93	25.26
CDY69792	Canola	cytosol	18.93	25.26
CDY21586	Canola	cytosol	18.16	24.57
Bra031921.1-P	Field mustard	cytosol	22.25	23.58
AT5G09540.1	Thale cress	nucleus	16.88	23.57
CDY31322	Canola	cytosol	22.25	23.32
KRH42098	Soybean	nucleus	24.04	20.66
VIT_03s0017g00300.t01	Wine grape	nucleus	25.32	20.37
TraesCS5D01G252200.1	Wheat	cytosol, nucleus, plastid	27.11	20.11
Bra024289.1-P	Field mustard	nucleus	22.76	19.39
Solyc07g007230.2.1	Tomato	nucleus	20.97	19.25
KRH49811	Soybean	nucleus	22.76	18.9
AT5G64360.7	Thale cress	nucleus	22.25	18.75
CDX84519	Canola	nucleus	22.51	18.53
KRH10601	Soybean	nucleus	23.02	18.11
CDY58269	Canola	nucleus	22.25	17.33
PGSC0003DMT400079004	Potato	cytosol	20.97	16.05
KRH21766	Soybean	nucleus	20.46	16.03
CDY46799	Canola	nucleus	15.09	15.05
Solyc11g006170.1.1	Tomato	nucleus	23.79	14.33
PGSC0003DMT400073845	Potato	cytosol	23.27	13.96
Solyc11g006140.1.1	Tomato	nucleus	20.2	13.28
Solyc01g105780.2.1	Tomato	nucleus	24.3	13.25
PGSC0003DMT400083794	Potato	nucleus	24.3	12.79
CDY45966	Canola	nucleus	20.2	10.62
CDY45473	Canola	nucleus	20.2	10.56
Bra027007.1-P	Field mustard	nucleus	19.95	10.46
AT1G62970.1	Thale cress	nucleus	19.18	9.41

Protein Annotations

EnsemblPlants:TraesCS2D01G172200.1	EnsemblPlantsGene:TraesCS2D01G172200	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PANTHER:PTHR45496	SEG:seg	SMART:SM00271	SUPFAM:SSF46565	TIGR:cd06257
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:115958073..115959248

Molecular Weight (calculated)

41030.3 Da

IEP (calculated)

5.924

GRAVY (calculated)

-0.339

Length

391 amino acids

Sequence
(BLAST)

001: MDSSAGGGGV EPARSLEIAA RLLAARDLVG CKRFAEHAVD ADPLLPGADE LLAVADVHLA AQRLLPSGRP DPLAILQLQP NPDSADVKRA FRRLANLLAP
101: RRNPHPGADT ALRAVEEAFA HLSESTSTGA APAPAAPGGA SAAEDTFWTV CPHCCHVHQY ERLLVGRSLM CASAGCRRPF VATELPAAPP IVPGTDFYYC
201: AWGFIPMGFP KPADLCTDWK PFFPMPRDSS APQPASQPAP TDNFGKQNVG NNVGVGHTNA NAPPSNAHPG NKSAGGGTVA GPPRGKIKKT AARKKVGGGL
301: KKHASGGVES GIEPSLLGPD WSENAEGGHT ENSRGININE VAKATDDSMM LHFGADGDIG FDLDVDASDD IMENLPDLPF LREDDNSRRM F

Best Arabidopsis Sequence Match ( AT2G01710.1 )
(BLAST)

001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.