Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G226500.1 | Wheat | plastid | 98.17 | 98.74 |
| HORVU2Hr1G051300.27 | Barley | plastid | 93.84 | 92.76 |
| Os07t0492100-01 | Rice | plastid | 77.02 | 79.4 |
| EER97255 | Sorghum | plastid | 77.44 | 78.48 |
| Zm00001d006443_P001 | Maize | nucleus | 76.19 | 74.82 |
| GSMUA_Achr4P26310_001 | Banana | cytosol | 5.41 | 73.03 |
| Solyc03g093850.1.1 | Tomato | cytosol | 32.39 | 63.88 |
| GSMUA_Achr4P26320_001 | Banana | cytosol, mitochondrion, nucleus | 45.55 | 59.98 |
| CDY11056 | Canola | nucleus, plastid | 47.54 | 52.19 |
| CDX92677 | Canola | nucleus, plastid | 47.38 | 51.96 |
| AT4G25120.1 | Thale cress | nucleus | 48.46 | 50.74 |
| VIT_16s0013g00300.t01 | Wine grape | nucleus | 45.63 | 50.69 |
| Bra019188.1-P | Field mustard | nucleus | 47.04 | 49.56 |
| Solyc03g093840.1.1 | Tomato | endoplasmic reticulum | 9.74 | 49.37 |
| KRH33265 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 6.83 | 37.27 |
| TraesCS2B01G254500.1 | Wheat | plastid | 6.33 | 20.6 |
Protein Annotations
| Gene3D:1.10.10.160 | Gene3D:1.10.486.10 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:DExx_box_DNA_helicase_dom_sf | InterPro:DNA_helicase_UvrD-like_C |
| InterPro:DNA_helicase_UvrD/REP | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003678 |
| GO:GO:0003824 | GO:GO:0004003 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006310 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 |
| GO:GO:0036292 | GO:GO:0043138 | InterPro:IPR013986 | InterPro:IPR014016 | InterPro:IPR014017 | InterPro:P-loop_NTPase |
| PFAM:PF00580 | PFAM:PF13361 | PFscan:PS51198 | PFscan:PS51217 | PANTHER:PTHR11070 | PANTHER:PTHR11070:SF2 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS2D01G237200 | EnsemblPlants:TraesCS2D01G237200.2 | InterPro:UvrD-like_ATP-bd | InterPro:UvrD/AddA_N | SEG:seg |
Description
No Description!
Coordinates
chr2D:+:239707790..239734721
Molecular Weight (calculated)
134259.0 Da
IEP (calculated)
6.171
GRAVY (calculated)
-0.417
Length
1201 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSRSKENIYP APPHYGSSSN PSRLLPCKRP LQSPCPPPRR PLADVTGNAL QQPGSAGGVE GIDYGYITPL PKVPKSCGFL LEDDDMDEAF LLEVDAICEE
0101: HSRSMAGKDK GREKDLTVER GPVVVAAATH AGPVCGTLED AFWTEAYAIF EECDAQPAAK SQDEELKEMV EEESSVLSCG DDSLLPAVSI ADDCVKLEDT
0201: FWEVNAISKE HHVTSSEMNQ EHYVASLAIN QDEIDEVYVE DGSVALCVDF PPVISIAEEG GEVVDALLGE VDVIHEGQVA MSAAKGKEEP GEMGLEMEEN
0301: EGCAPRKYYE YLHSLNDKQR EAACSDVAVP LMIVAGPGSG KTSTMVGRVL TLLKEGIPPS NILAMTFTTA AASEMRDRIG AVVGKAVAKE IIISTFHSFC
0401: LQLCRTHAEK LGRTSEFIIY GHGQQRRAII EAERLLEHGK SDGLGDAVKQ YDGDIKHSFK DKAKKWLKFV TQAKSSGQAP EEYEKKGDLT GASILRHYNE
0501: ILVSCNALDY HDFINSSITL LTKFPEVYKE CQNTWQAIVV DEFQDTSAMQ YFLLKLLASH NHITIVGDDD QSIFSFNGAD VSGFDSFRRD FPNHKEIRLN
0601: KNYRSTRAIV EAATALIHNN TKRCNHKLAE TDNPSGSKIT VKECHSEDSQ CAFVIDKIIE TTSSSAEGRD FGKIAVLYRR QITGKAFQVS FRNRKIPFNV
0701: HGVAFYRKKA IKAIMAILRT TLPGCDDGPW RQALKTLLPG DKEEKKKIID HVEKISLARK CSFISAATDI FSAKVSGTFK RVSHFVGCRT QITQGRKVLS
0801: TLYSLSKFVE REQSVSAVIS SAGNMLPQQY LLEKRAVIDN DGGKLLNEDN DIRSVLQFLM DDVSDFLSTH FSSSGDANQT EEKGCTATLK AFIDYISLRE
0901: TENFRSRKEE NKNSITLTTI HQSKGLEWDV VFIVQANDSE IPLLHEYNGT VKEAGCTLEE ERRLFYVAMT RARKKLYILH VTVDSHRQLL PPSRFLREIP
1001: GHLLDIQGEG AATKYHEQPS GDISFDHAEG ETSTEKPIVN QNETSPYPEL MQSCLANDFL KRFEIDDRAV VSHIFHHWAK RQAFQIPKRL LDKIKFVIDE
1101: RLRGKGYKRK DVLCKLKSLL SDDEALGYAE YVIKWEQIPI DKRSHLMRER QEHFQKQRIE NSMGSSEPTP KQISYLRSLG CTITPTSRLH ASNLIEKYKS
1201: L
0101: HSRSMAGKDK GREKDLTVER GPVVVAAATH AGPVCGTLED AFWTEAYAIF EECDAQPAAK SQDEELKEMV EEESSVLSCG DDSLLPAVSI ADDCVKLEDT
0201: FWEVNAISKE HHVTSSEMNQ EHYVASLAIN QDEIDEVYVE DGSVALCVDF PPVISIAEEG GEVVDALLGE VDVIHEGQVA MSAAKGKEEP GEMGLEMEEN
0301: EGCAPRKYYE YLHSLNDKQR EAACSDVAVP LMIVAGPGSG KTSTMVGRVL TLLKEGIPPS NILAMTFTTA AASEMRDRIG AVVGKAVAKE IIISTFHSFC
0401: LQLCRTHAEK LGRTSEFIIY GHGQQRRAII EAERLLEHGK SDGLGDAVKQ YDGDIKHSFK DKAKKWLKFV TQAKSSGQAP EEYEKKGDLT GASILRHYNE
0501: ILVSCNALDY HDFINSSITL LTKFPEVYKE CQNTWQAIVV DEFQDTSAMQ YFLLKLLASH NHITIVGDDD QSIFSFNGAD VSGFDSFRRD FPNHKEIRLN
0601: KNYRSTRAIV EAATALIHNN TKRCNHKLAE TDNPSGSKIT VKECHSEDSQ CAFVIDKIIE TTSSSAEGRD FGKIAVLYRR QITGKAFQVS FRNRKIPFNV
0701: HGVAFYRKKA IKAIMAILRT TLPGCDDGPW RQALKTLLPG DKEEKKKIID HVEKISLARK CSFISAATDI FSAKVSGTFK RVSHFVGCRT QITQGRKVLS
0801: TLYSLSKFVE REQSVSAVIS SAGNMLPQQY LLEKRAVIDN DGGKLLNEDN DIRSVLQFLM DDVSDFLSTH FSSSGDANQT EEKGCTATLK AFIDYISLRE
0901: TENFRSRKEE NKNSITLTTI HQSKGLEWDV VFIVQANDSE IPLLHEYNGT VKEAGCTLEE ERRLFYVAMT RARKKLYILH VTVDSHRQLL PPSRFLREIP
1001: GHLLDIQGEG AATKYHEQPS GDISFDHAEG ETSTEKPIVN QNETSPYPEL MQSCLANDFL KRFEIDDRAV VSHIFHHWAK RQAFQIPKRL LDKIKFVIDE
1101: RLRGKGYKRK DVLCKLKSLL SDDEALGYAE YVIKWEQIPI DKRSHLMRER QEHFQKQRIE NSMGSSEPTP KQISYLRSLG CTITPTSRLH ASNLIEKYKS
1201: L
0001: MENLPPNRGM WNQEYSHGRI SQSFRSAKPL LDRKRPIENA PNSSNPLPQR MKESMDTESV SHNINFNSTP LMELSANTPY KRLKPEIESY ADGHPCGLRT
0101: PPPRFDLDKE IINGFQTDIY ADVGSLSEAF VTPLKEPERV TLSNGCSTSS ILDDDFDDSI LEEIDLICEQ SARKAACQTP TTSIYQTPSK DNKSSDPKAS
0201: LDFRDVEKFE PDSNVKLKLD EETPTIAADP ALLNSMPDEC SKYMLSLNDR QRDAACSNIS TPLMVIAGPG SGKTSTMVGR VLVLLNEGLL PSNILAMTFT
0301: KAATSEMRER IGKSAGKKAA KDITISTFHS FSLQLCRMHA DKLQRTSEFS VYGHGQQRRA IIEAVRLYEE EKKNGSKTSV PCESGEGLNG AGAGAVCPEY
0401: AKDLSKKWQK FVTQGKASGK SPEQCRKMGN EIGAKILGNY NDILKACDAL DYHDLISCSV TLLSDFPEVF KECQDTWKAI IVDEFQDTST MQYKLLRMLG
0501: SHNHITIVGD DDQSIFGFNG ADSSGFDSFR RDFPNYKEVR LIKNYRSSRH IVEAASSIIK NNTKRCQSKS ISSENSQGSK ITVKECHNEE AQCAYVIDKI
0601: IEITNDGSTP CCSHGDIAIL YRRQVSGKVF QNAFRQRKIP FNVHGVAFYR KKVVQVILAM LKTTFSECDD ASYRRVFKAL LPFEKEEKKR IIEHIEKIST
0701: SRKCSFISAA SDIFNAKISG TFKRSQLTQG RKVLQTLDMV AKLVDREQSL SAVVTCVANM IPQKYLLEQR AVVDNDGGKL LNEDNDLRSV LQYLMDDVAE
0801: FISTHCTTTE EEDAIKEKKG CNQLHSFINY ISERETENFR SRRRDNENSV TLTTIHQSKG LEWDIVFIVK ANENEIPLLH ESNGNASESG TSLEEERRLL
0901: YVAMTRARKK LFFLYVTVDS NWQVLQPSRF LKEIPGHLLQ GDMSVNDCRK VHENLPNKTE QSVSSFGTDI KHEESKLTDN DVMNIPEDYA SEESIAAYAL
1001: NGNNFLKRFD VEVRSVVSHL FHNWAKKQAF QEPKRLIDKV RFVIGERLAI KKNKHKDVLR ALKSSLTSEE AFQYAEHVLR WEQLPADTRA HIVREKQEHF
1101: QKLRIENSMG TSEATSKQIA FLHSLGCTVV PTSRLHASRL IEQYKSL
0101: PPPRFDLDKE IINGFQTDIY ADVGSLSEAF VTPLKEPERV TLSNGCSTSS ILDDDFDDSI LEEIDLICEQ SARKAACQTP TTSIYQTPSK DNKSSDPKAS
0201: LDFRDVEKFE PDSNVKLKLD EETPTIAADP ALLNSMPDEC SKYMLSLNDR QRDAACSNIS TPLMVIAGPG SGKTSTMVGR VLVLLNEGLL PSNILAMTFT
0301: KAATSEMRER IGKSAGKKAA KDITISTFHS FSLQLCRMHA DKLQRTSEFS VYGHGQQRRA IIEAVRLYEE EKKNGSKTSV PCESGEGLNG AGAGAVCPEY
0401: AKDLSKKWQK FVTQGKASGK SPEQCRKMGN EIGAKILGNY NDILKACDAL DYHDLISCSV TLLSDFPEVF KECQDTWKAI IVDEFQDTST MQYKLLRMLG
0501: SHNHITIVGD DDQSIFGFNG ADSSGFDSFR RDFPNYKEVR LIKNYRSSRH IVEAASSIIK NNTKRCQSKS ISSENSQGSK ITVKECHNEE AQCAYVIDKI
0601: IEITNDGSTP CCSHGDIAIL YRRQVSGKVF QNAFRQRKIP FNVHGVAFYR KKVVQVILAM LKTTFSECDD ASYRRVFKAL LPFEKEEKKR IIEHIEKIST
0701: SRKCSFISAA SDIFNAKISG TFKRSQLTQG RKVLQTLDMV AKLVDREQSL SAVVTCVANM IPQKYLLEQR AVVDNDGGKL LNEDNDLRSV LQYLMDDVAE
0801: FISTHCTTTE EEDAIKEKKG CNQLHSFINY ISERETENFR SRRRDNENSV TLTTIHQSKG LEWDIVFIVK ANENEIPLLH ESNGNASESG TSLEEERRLL
0901: YVAMTRARKK LFFLYVTVDS NWQVLQPSRF LKEIPGHLLQ GDMSVNDCRK VHENLPNKTE QSVSSFGTDI KHEESKLTDN DVMNIPEDYA SEESIAAYAL
1001: NGNNFLKRFD VEVRSVVSHL FHNWAKKQAF QEPKRLIDKV RFVIGERLAI KKNKHKDVLR ALKSSLTSEE AFQYAEHVLR WEQLPADTRA HIVREKQEHF
1101: QKLRIENSMG TSEATSKQIA FLHSLGCTVV PTSRLHASRL IEQYKSL
Arabidopsis Description
SRS2ATP-dependent DNA helicase SRS2-like protein At4g25120 [Source:UniProtKB/Swiss-Prot;Acc:D1KF50]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.