Factsheet for TraesCS2D01G240000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G235400.1	Wheat	nucleus	98.67	99.4
TraesCS2B01G254700.1	Wheat	nucleus	98.07	98.37
HORVU2Hr1G053260.1	Barley	nucleus	97.78	97.92
Os07t0435900-01	Rice	nucleus	86.52	85.38
EER96294	Sorghum	nucleus	83.41	79.3
Zm00001d005445_P001	Maize	nucleus	65.33	77.23
Zm00001d019520_P001	Maize	nucleus	65.04	66.82
GSMUA_Achr5P13120_001	Banana	nucleus	57.93	64.42
GSMUA_Achr4P29270_001	Banana	nucleus	48.74	61.15
GSMUA_Achr1P01130_001	Banana	nucleus	49.19	60.36
VIT_05s0049g02220.t01	Wine grape	nucleus	51.56	51.79
PGSC0003DMT400075191	Potato	nucleus	48.59	49.7
Solyc12g096990.1.1	Tomato	nucleus	48.74	49.47
AT2G33290.2	Thale cress	nucleus	47.56	49.31
CDX78210	Canola	nucleus	46.07	49.29
CDY23755	Canola	nucleus	46.22	48.98
CDX73506	Canola	nucleus	45.93	48.97
Bra007048.1-P	Field mustard	nucleus	45.78	48.97
PGSC0003DMT400003956	Potato	nucleus	50.37	48.85
Solyc09g090810.1.1	Tomato	nucleus	50.22	48.71
CDY37735	Canola	nucleus, plastid	45.48	48.19
Bra021840.1-P	Field mustard	nucleus, plastid	45.48	48.19
AT4G13460.2	Thale cress	nucleus	46.07	47.85
GSMUA_Achr6P36730_001	Banana	nucleus	41.19	47.12
CDY19475	Canola	nucleus	37.19	45.47
KRH49479	Soybean	nucleus	46.37	44.15
CDY17156	Canola	nucleus	36.89	43.99
KRG89164	Soybean	nucleus	46.52	43.85
KRH07636	Soybean	nucleus	36.89	43.3
TraesCS1D01G043400.1	Wheat	nucleus	40.3	42.5
Bra005511.1-P	Field mustard	plastid	37.48	41.27
TraesCS3D01G450600.1	Wheat	nucleus	40.44	40.21
TraesCS4D01G204500.1	Wheat	nucleus	40.15	39.91
TraesCS3D01G450700.1	Wheat	nucleus	37.78	36.48
TraesCS1D01G307700.1	Wheat	nucleus	30.81	30.86
TraesCS5D01G152000.1	Wheat	nucleus	30.67	30.09
TraesCS1D01G366800.1	Wheat	nucleus	30.07	30.03
TraesCS3D01G329100.1	Wheat	nucleus	29.93	27.19
TraesCS3D01G433900.1	Wheat	nucleus	26.37	25.8
TraesCS4D01G278500.1	Wheat	nucleus	30.22	24.91
TraesCS3D01G378200.1	Wheat	plastid	24.3	23.94
TraesCS3D01G307900.1	Wheat	nucleus	11.56	23.49
TraesCS1D01G241500.1	Wheat	nucleus	25.63	21.12
TraesCS2D01G389100.1	Wheat	nucleus	26.37	18.54
TraesCS5D01G197700.2	Wheat	plastid	29.48	17.55
TraesCS1D01G118300.1	Wheat	nucleus, plastid	27.85	15.36
TraesCS2D01G378500.3	Wheat	nucleus	15.41	15.34
TraesCS2D01G478100.1	Wheat	nucleus	12.89	14.55
TraesCS2D01G477200.1	Wheat	mitochondrion, nucleus	14.81	13.55
TraesCS6D01G208400.1	Wheat	nucleus	13.63	13.51
TraesCS2D01G566400.1	Wheat	nucleus	13.48	12.35
TraesCS5D01G193000.2	Wheat	nucleus	18.52	11.13
TraesCS6D01G254900.2	Wheat	nucleus	16.89	7.06
TraesCS5D01G192900.1	Wheat	cytosol	0.3	1.23

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987
GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968
InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987
PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS51015
PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF95	InterPro:PUA-like_sf	InterPro:Pre-SET_dom	InterPro:SET_dom
SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199
SUPFAM:SSF88697	EnsemblPlantsGene:TraesCS2D01G240000	EnsemblPlants:TraesCS2D01G240000.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr2D:+:257386734..257388761

Molecular Weight (calculated)

73912.3 Da

IEP (calculated)

5.692

GRAVY (calculated)

-0.141

Length

675 amino acids

Sequence
(BLAST)

001: MEVDESSPSS LLSSPSSLSS DSIDLNFLPF LRREPKSEPA SPEHGPLPPP LPLPLPPQAT AAIAVAFAAP TTPDLSSPEV LTPLQSLPPN PDEDALFAEY
101: CRLASLYLLS AGAGAIVPAP TPEAAAPAAV QPGSGSAAKK RRPRSSELVR VSSLSVRDQI YFRDLVRRAR ITFESLRGLL LKDDERAEAL GLAGVIGLGS
201: VDRRRVRADL RAAALMADRD LWLNRDRRIV GPIPGIAVGD AFFFRMELCV LGLHGQVQAG IDYLSAGQSA SGEPIATSII VSGGYEDDDD RGDVLVYTGH
301: GGRDPNLHKH CVDQKLEGGN LALERSMAYG IEIRVIRAVK SKRSPVGKVY FYDGLYKVVD YWLDRGKAGF GVYKYKMIRI EGQEPMGSVN YRAAEHLKVD
401: ALSMRPTGYL SFDISMGREI MPVALYNDVD DDRDPLLFEY LARPIFPSSA VQGKFAEGGG GCGCIENCSI GCYCAERNGG EFAYDKAGVL LRGKPLLYEC
501: GPYCQCPPSC PNRVSQKGLK NRLEVFRSRE TGWGVRSLDL IKSGTFICEF SGIVLTHQQS EIVAASGDCL VHPNRFPSRW LDWGDISDVY PEYVAPNHPA
601: TTDLNFSIDV SRARNVACYF SHSCSPNVFI QFVLFDHYNV SYPHLMIFAL ENIPPLRELS IDYGMIDEWV GKLTM

Best Arabidopsis Sequence Match ( AT2G33290.1 )
(BLAST)

001: MSTLLPFPDL NLMPDSQSST AGTTAGDTVV TGKLEVKSEP IEEWQTPPSS TSDQSANTDL IAEFIRISEL FRSAFKPLQV KGLDGVSVYG LDSGAIVAVP
101: EKENRELIEP PPGFKDNRVS TVVVSPKFER PRELARIAIL GHEQRKELRQ VMKRTRMTYE SLRIHLMAES MKNHVLGQGR RRRSDMAAAY IMRDRGLWLN
201: YDKHIVGPVT GVEVGDIFFY RMELCVLGLH GQTQAGIDCL TAERSATGEP IATSIVVSGG YEDDEDTGDV LVYTGHGGQD HQHKQCDNQR LVGGNLGMER
301: SMHYGIEVRV IRGIKYENSI SSKVYVYDGL YKIVDWWFAV GKSGFGVFKF RLVRIEGQPM MGSAVMRFAQ TLRNKPSMVR PTGYVSFDLS NKKENVPVFL
401: YNDVDGDQEP RHYEYIAKAV FPPGIFGQGG ISRTGCECKL SCTDDCLCAR KNGGEFAYDD NGHLLKGKHV VFECGEFCTC GPSCKSRVTQ KGLRNRLEVF
501: RSKETGWGVR TLDLIEAGAF ICEYAGVVVT RLQAEILSMN GDVMVYPGRF TDQWRNWGDL SQVYPDFVRP NYPSLPPLDF SMDVSRMRNV ACYISHSKEP
601: NVMVQFVLHD HNHLMFPRVM LFALENISPL AELSLDYGLA DEVNGKLAIC N

Arabidopsis Description

SUVH2Histone-lysine N-methyltransferase family member SUVH2 [Source:UniProtKB/Swiss-Prot;Acc:O22781]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.