Factsheet for TraesCS2D01G378500.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G382000.5	Wheat	nucleus	98.23	98.38
TraesCS2B01G399300.4	Wheat	nucleus	97.05	97.19
HORVU7Hr1G064110.6	Barley	nucleus, plastid	74.78	83.39
Zm00001d049884_P006	Maize	nucleus	60.03	54.78
EES15150	Sorghum	nucleus	59.14	54.26
Zm00001d031851_P002	Maize	nucleus	58.11	52.89
CDX92067	Canola	nucleus	30.53	43.86
VIT_05s0049g01800.t01	Wine grape	nucleus	35.69	43.21
TraesCS2D01G477200.1	Wheat	mitochondrion, nucleus	46.9	43.09
GSMUA_Achr1P20340_001	Banana	nucleus	44.84	42.82
AT3G04380.1	Thale cress	nucleus	30.83	42.48
TraesCS2D01G566400.1	Wheat	nucleus	45.72	42.06
KRG97025	Soybean	nucleus	17.11	40.85
PGSC0003DMT400051920	Potato	nucleus	30.53	40.67
TraesCS2D01G478100.1	Wheat	nucleus	34.07	38.63
KRH68776	Soybean	nucleus	37.61	37.67
KRH34133	Soybean	nucleus	37.76	37.32
TraesCS6D01G208400.1	Wheat	nucleus	37.46	37.3
CDY49341	Canola	nucleus	30.53	37.16
KRG92731	Soybean	nucleus	37.91	36.04
Bra036004.1-P	Field mustard	nucleus	32.89	35.68
KRG95723	Soybean	nucleus	37.76	35.36
KRH32246	Soybean	nucleus	42.77	35.32
KRH19618	Soybean	nucleus	42.77	35.28
CDY14903	Canola	nucleus	33.04	35.0
VIT_07s0005g04190.t01	Wine grape	mitochondrion, nucleus	42.04	33.61
CDX94744	Canola	nucleus	33.33	32.99
PGSC0003DMT400044180	Potato	nucleus	36.73	32.3
Solyc06g083760.2.1	Tomato	nucleus	40.86	32.17
CDY22319	Canola	nucleus	33.19	31.91
AT5G43990.9	Thale cress	nucleus	34.37	31.49
Solyc09g090630.1.1	Tomato	nucleus	36.87	31.49
Solyc09g072890.1.1	Tomato	nucleus	37.91	31.15
AT1G04050.1	Thale cress	nucleus	33.63	31.06
Bra033710.1-P	Field mustard	nucleus	33.63	30.4
CDX96935	Canola	nucleus	33.19	28.7
Bra001104.1-P	Field mustard	nucleus	30.83	27.65
TraesCS3D01G307900.1	Wheat	nucleus	12.68	25.9
CDY42922	Canola	plasma membrane, vacuole	30.24	24.76
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	30.83	22.19
TraesCS5D01G152000.1	Wheat	nucleus	16.22	15.99
TraesCS1D01G366800.1	Wheat	nucleus	15.49	15.53
TraesCS3D01G433900.1	Wheat	nucleus	15.78	15.51
TraesCS1D01G307700.1	Wheat	nucleus	15.34	15.43
TraesCS2D01G240000.1	Wheat	nucleus	15.34	15.41
TraesCS3D01G329100.1	Wheat	nucleus	15.49	14.13
TraesCS1D01G043400.1	Wheat	nucleus	13.27	14.06
TraesCS4D01G204500.1	Wheat	nucleus	13.72	13.7
TraesCS3D01G450600.1	Wheat	nucleus	12.98	12.96
TraesCS3D01G450700.1	Wheat	nucleus	13.27	12.88
TraesCS1D01G241500.1	Wheat	nucleus	15.34	12.7
TraesCS4D01G278500.1	Wheat	nucleus	14.9	12.33
TraesCS3D01G378200.1	Wheat	plastid	10.62	10.51
TraesCS2D01G389100.1	Wheat	nucleus	14.16	10.0
TraesCS5D01G197700.2	Wheat	plastid	16.08	9.61
TraesCS1D01G118300.1	Wheat	nucleus, plastid	15.93	8.82
TraesCS6D01G254900.2	Wheat	nucleus	18.73	7.86
TraesCS5D01G193000.2	Wheat	nucleus	12.68	7.66
TraesCS5D01G192900.1	Wheat	cytosol	0.88	3.68
CDX92068	Canola	mitochondrion	0.0	0.0
CDY42923	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	Gene3D:1.10.8.850	MapMan:12.3.3.7	Gene3D:2.170.270.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:IPR001214	InterPro:IPR003616
InterPro:IPR007728	InterPro:IPR025776	PFAM:PF00856	PFAM:PF05033	PFAM:PF10440	PFscan:PS50280
PFscan:PS50867	PFscan:PS50868	PFscan:PS51580	PANTHER:PTHR22884	PANTHER:PTHR22884:SF409	InterPro:Post-SET_dom
InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00468	SUPFAM:SSF82199	InterPro:SUVR4/1/2
EnsemblPlantsGene:TraesCS2D01G378500	EnsemblPlants:TraesCS2D01G378500.3	InterPro:WIYLD_domain	:	:	:

Description

No Description!

Coordinates

chr2D:-:482800905..482804953

Molecular Weight (calculated)

75351.5 Da

IEP (calculated)

5.343

GRAVY (calculated)

-0.505

Length

678 amino acids

Sequence
(BLAST)

001: MVSHKDRAQK AYEAMGRLGF PKKQVSPVLK HLYKLFENWE PIEDESYRIL ADTILDSQKN QPMPATSHHV TDQESEPHNS TSVTPDPDDQ HPSAARYDMD
101: VSDNETSLIN RPMDVSENPQ DALFLQEPKP EPEIDVPAAP VANDLNTGSS GGDNMLIEHC KTRDMLTWGS DARASIVNHD QNPDSSQHAV KYGVESTVQN
201: THQASFVELD VASSTLGEVK VSLKCKFDPS EVCISLDKVF KIVEDKCLRS YKTLPPDFSV GKLMNEICQY VAESRAVHSE AQNNGGSLQE QALETYAPFV
301: KPIACKHAVD GNGNAAVGSS SEPSFQNWVV AYQPQEALFK QRPLHDVADI TKGEERVRIP IVNEFGSDSC PPLFYYIRKN LIFQSAYVNT SLARIGDEDC
401: CADCSGNCLL ESHPCACARS TGGEIAYTPE GLVRAELIDE CIAVNHFPEK DNKFYCKACP LEIYKTKPSP DPCKGHLARK FIKECWSKCG CGMQCGNRVI
501: QRGITCNLQV FFTNEGKGWG LRTLDGLPKG AFICELVGEV LTSSELHERK AKNSKHVDQV LLDASWGSEG VLRDEEALCL DPTFYGNVGR FVNHRCYDAN
601: LVIIPVEVET PDRHYYHLAL FTAKKIEAFE ELTRDYGIDF DGTDDLNKAF DCMCGSKYCR GGGPKNSRKR TRASASRN

Best Arabidopsis Sequence Match ( AT3G04380.1 )
(BLAST)

001: MISLSGLTSS VESDLDMQQA MLTNKDEKVL KALERTRQLD IPDEKTMPVL MKLLEEAGGN WSYIKLDNYT ALVDAIYSVE DENKQSEGSS NGNRGKNLKV
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK

Arabidopsis Description

SUVR4Histone-lysine N-methyltransferase SUVR4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W595]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.