Factsheet for TraesCS2D01G519700.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane, extracellular

Predictor Summary:

plastid 1
plasma membrane 5
extracellular 5
endoplasmic reticulum 5
golgi 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G518100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	85.81	84.93
TraesCS2B01G546700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	70.24	72.5
Zm00001d026436_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	37.72	53.43
EES12957	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	37.37	49.77
Zm00001d002094_P001	Maize	extracellular, plastid	34.6	49.26
Os04t0644400-01	Rice	nucleus	30.45	48.35
PGSC0003DMT400079355	Potato	extracellular	21.8	45.99
TraesCS7D01G020100.1	Wheat	cytosol, plastid	17.65	45.95
Solyc07g007860.1.1	Tomato	extracellular	21.45	44.93
KRH03647	Soybean	endoplasmic reticulum, extracellular, plasma membrane	28.72	43.68
PGSC0003DMT400007468	Potato	extracellular	33.56	40.25
KRH20158	Soybean	endoplasmic reticulum	31.49	40.09
TraesCS2D01G422800.1	Wheat	extracellular, plastid	26.64	39.49
TraesCS7D01G509900.1	Wheat	endoplasmic reticulum, extracellular	22.49	39.16
TraesCS2D01G422700.1	Wheat	extracellular	22.15	39.02
TraesCS7D01G020000.1	Wheat	plastid	18.69	38.03
HORVU2Hr1G114680.2	Barley	endoplasmic reticulum	52.6	36.28
Solyc12g009650.1.1	Tomato	nucleus	32.87	35.85
Bra037196.1-P	Field mustard	endoplasmic reticulum, plasma membrane	31.14	35.43
VIT_11s0016g05840.t01	Wine grape	endoplasmic reticulum, plasma membrane	32.53	35.34
CDX81428	Canola	endoplasmic reticulum, plasma membrane	30.1	33.98
AT2G10940.2	Thale cress	endoplasmic reticulum, plasma membrane	32.87	32.65
CDY18576	Canola	endoplasmic reticulum, plasma membrane	30.1	31.07
TraesCS7D01G509800.1	Wheat	plasma membrane	29.41	30.8

Protein Annotations

Gene3D:1.10.110.10	MapMan:35.2	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	GO:GO:0005575	GO:GO:0005576
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009506	GO:GO:0009507	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0016020	GO:GO:0048046	InterPro:Hydrophob_seed	PFAM:PF14547
PRINTS:PR01217	PFscan:PS51257	PANTHER:PTHR31731	PANTHER:PTHR31731:SF20	SMART:SM00499	SUPFAM:SSF47699
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2D01G519700	EnsemblPlants:TraesCS2D01G519700.1	TIGR:cd01958	SEG:seg

Description

No Description!

Coordinates

chr2D:+:609431617..609432519

Molecular Weight (calculated)

27138.8 Da

IEP (calculated)

8.155

GRAVY (calculated)

0.740

Length

289 amino acids

Sequence
(BLAST)

001: MESTKISALL VLAMLALSSP TVVLACSPAS GCGSGTPSSG TPSAGGVSIP PAIGGVVGTV TPIIGGAAPV VGGVVGKVTP VAGGAVPTVG GVVGKVTPVV
101: GGMVPTVGGV VGKVTPVVGG AVPAVGGMVS PIVGTVGGVV GGVPAVGGVV TPVIGVVAPI IGGSPSPKSR HGGRKACPPS PPTPTPSPPT PAPTPPTPTP
201: SPTPSSDTCP IDTLKLGVCL DLLGNELHIG DASVKCCPLV EGIAGLTAAA CLCTAIKAKV LNLALYVPLA LQLLVNDCGC AVPPGYTCA

Best Arabidopsis Sequence Match ( AT3G22142.1 )
(BLAST)

0001: MGFRTRNLSF LILLLLNFFA ATYARECSPP KPSPKPHKPP KHSVVPPKPP AVKPHPHPKP PTIKPPPPKR HPHPKPPTVK PHPHPKPPTK PHPHPKPPTK
0101: PHPHPKPPTI KPPPHPKPRP HPKPPNVKPH PHPKPPTKPH PHPKPPTKHH PHPKPPTIKP PPKPPSVKPP PSTPKPPTTN PPPSTPQPPT HKPPPCTPTP
0201: PVASPPMATP PTQMPPIATP PIAKSPVATP PIATPPTATP PITIPPVATP PITTPPIANP PIIMPPIATP PVAAPPITNP PISKPPVTTP PTTTPPIAKP
0301: PIATPPISTP PAATPPAATP PITTLPPAKP PVAISPIVTP PVTPIAQPPV ATPPTATPPV ATPPIATPPT SKSPISTPPI SESPVATPPT ATSPIKTPPP
0401: AKPPVATPPI AKSPIATPPT ATPPVATPPI EKPPVATPPT TTPPTATPPV AKPPVETPPI ATPPTAKPPI STPPISKPPV ATPPAATPPI TTPTPVKPPV
0501: ATPPLAIPPV AKPPVVTPPT ATPPIATPPI AKSPVATPPT ATPPVATPPI AKPPVVTPPT TTPPTATPPV AKPPVATPPI ATPPTAKPPI STPPISKSPV
0601: ATPPAATPPI TTPPPAKPPV ATPPIATPPI AKPPVATPPT ATPPIATSPV AKPPVATPPI KTPPPAKPPV AIPPIATPPV AKPPVATPPT ATPPIATPPI
0701: ATPPVVTPPT ATPPVATPPI AKPPTTIPPT ATPPVAMPPI ATPPTAKPPI ATPPIAIPPV AKPPVVTPPT ATPPIATPPI AKSPVATPPT ATPPVATPPI
0801: AKPPVATPPT TAPPTATPPV AKPPVATPPI ATPPTAKPPI LTPPISKPPV ATPPAATPPI TTPPPAKPPV ATPPIATPPI AKPPVATPPT ATPPIATSPV
0901: AKPPVAIPPI KTPPPAKPPV AIPPIATPPV AKPPVATPPT ATPPIATSPI ATPPVVTPPT ATSPVATPPI AKPPTTTPPT ATPPVAMPPI ATPPTAKPPV
1001: ATPPIANPPV EKPPVATPPI AKPPTVLPPI AKPPVETSPT ATPPTATPPV AIPPVVKPPV AIPPITKPPV ATPPVTNPPT AMPPIVTPPP IVTPPIAKSP
1101: IATPPVSTPP IAKPPIATPP VATTPIAKPP IATPPTANPP VANPPIAKSP IAKPPIATPP TAMPSIATPP IGKPPVATPP MAKPPVASPP IATPPIIKPP
1201: VATPPITKPP VATPPVATPP IAKPPVATSP IETPPVAKPP VTTPPVATPP IVKPPIVTPP IATPPIAKSP IAPPPIGTPP IAKPPVATPP TATPPVATSP
1301: IAKPPVATPP PATPPVAKPP VATPPTVTPP VATPPIAKPP GARPPVATPP VATPPIAKSP VATPPMTKPP VASSPIATPP IAKTPIATPP TTMPKTCPID
1401: TLKLGSCVDL LGGLVHIGIG KSAKEKCCPV VEGLVDLDAA VCLCTTIKAK LLNIDVILPI ALEVLLNCGK NPPPGFKCPA

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIE8]
SUBAcon: [plasma membrane,vacuole,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.