Factsheet for TraesCS2D01G548100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G121210.3	Barley	golgi, plasma membrane	72.86	80.11
TraesCS2D01G548200.1	Wheat	plasma membrane, plastid	74.62	71.05
TraesCS3D01G488300.2	Wheat	plastid	67.34	57.02
TraesCS7D01G104600.1	Wheat	extracellular, golgi, plasma membrane	32.16	52.67
TraesCS7D01G104500.1	Wheat	extracellular, golgi, vacuole	38.69	52.2
TraesCS5D01G482100.1	Wheat	plasma membrane	41.96	50.15
TraesCS7D01G104900.1	Wheat	extracellular, golgi, plasma membrane	39.95	50.0
TraesCS7D01G104700.1	Wheat	plasma membrane	42.21	48.14
TraesCS4D01G346500.2	Wheat	golgi, plasma membrane, vacuole	35.68	39.89
KRH16968	Soybean	plasma membrane	31.66	38.89
KRH53654	Soybean	plasma membrane	33.42	35.56
TraesCS3D01G333300.1	Wheat	plasma membrane	33.67	35.17
KRH72599	Soybean	plasma membrane	33.42	34.73
KRH72593	Soybean	cytosol, golgi, plasma membrane	33.92	34.35
TraesCS5D01G071500.1	Wheat	plasma membrane	31.41	32.72
TraesCS7D01G449600.1	Wheat	plasma membrane	30.9	31.78
PGSC0003DMT400001491	Potato	golgi, plasma membrane, plastid	24.12	31.58
KRH38008	Soybean	plasma membrane	24.12	31.07
Solyc03g080070.2.1	Tomato	plasma membrane	30.15	30.85
TraesCS7D01G022700.1	Wheat	golgi, plasma membrane, vacuole	26.88	30.57
TraesCS6D01G009800.1	Wheat	plasma membrane	26.13	29.55
TraesCS6D01G009900.2	Wheat	plasma membrane	25.13	28.57
TraesCS2D01G298200.1	Wheat	plasma membrane	26.38	28.46
TraesCS4D01G262600.1	Wheat	plasma membrane	25.88	28.37
TraesCS7D01G082900.1	Wheat	plasma membrane	25.38	28.29
TraesCS5D01G021800.1	Wheat	plasma membrane	22.61	27.11
TraesCS6D01G044200.1	Wheat	plasma membrane	22.36	26.97
TraesCS7D01G472200.2	Wheat	plasma membrane	24.37	26.94
TraesCS5D01G032500.1	Wheat	extracellular, golgi, plasma membrane	18.09	26.47
TraesCS6D01G012400.1	Wheat	plasma membrane	23.12	25.99
TraesCS2D01G586500.1	Wheat	plasma membrane	24.87	25.98
TraesCS7D01G016700.1	Wheat	golgi, plasma membrane, vacuole	23.87	25.61
TraesCS7D01G022800.1	Wheat	plasma membrane	23.37	25.41
TraesCS3D01G199100.1	Wheat	extracellular, golgi, plasma membrane	23.87	24.68
TraesCS4D01G164600.1	Wheat	plasma membrane	16.33	23.72
TraesCS7D01G464900.2	Wheat	plasma membrane	22.11	23.34
TraesCS7D01G465000.1	Wheat	plasma membrane	20.6	21.13

Protein Annotations

EnsemblPlants:TraesCS2D01G548100.1	EnsemblPlantsGene:TraesCS2D01G548100	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	InterPro:EamA_dom	InterPro:WAT1-related
PANTHER:PTHR31218	PANTHER:PTHR31218:SF132	PFAM:PF00892	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix
MapMan:24.2.1.5	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:624193409..624213012

Molecular Weight (calculated)

42883.2 Da

IEP (calculated)

9.748

GRAVY (calculated)

0.518

Length

398 amino acids

Sequence
(BLAST)

001: MAASKLTRTL PISSLAPTPH AGPALRSPPT TGADTGLSWT SSNSVGRGTT VVCATGVDGQ DTTIHGHGSR WKPTVCVLLG ELINTGTILL GKVAVDGGMF
101: IFSLLCYRSI LGVIFIMPFA LLLERGKWKE LDTKALVWLS INAFVGYSLP LAMYYYGLHD TSASYGVIFS SLTPLFTFVL SILLGMESLR LKSKEGSAKV
201: VGALLCFGGA LLLSLYSGKE LHLFTPVIKG ITKSSNGVAG GQHHMRGTLL LLGDCICYAF WYPIQVKVLK VYPWKHWSST LTCVLGGLQT CVVGIFVRRD
301: KLAWQVGWNI QLLTIVYSAA LGTAANYWLN LYAVEKRGPV FPPMFNTLSI VFTMVLGALL LGEGITVGSL LGSALVFSGL YMYLYGKARE LRAKMTSG

Best Arabidopsis Sequence Match ( AT1G25270.1 )
(BLAST)

001: MKSVVAMVAV QFIFAGMFIL FKITVDDGTN LKVLVAYRLS FATIFMLPLA LIFQRKKRPE FTWRLLLLAF VSGLLGAAIP NILYLPGMAR TSATFSAASS
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP

Arabidopsis Description

WAT1-related protein At1g25270 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT23]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.