Factsheet for TraesCS2D01G566400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G616200.1	Wheat	nucleus	86.97	86.97
TraesCSU01G137800.1	Wheat	nucleus	48.85	86.33
HORVU2Hr1G127700.1	Barley	nucleus	71.1	74.12
HORVU2Hr1G127770.1	Barley	nucleus	64.72	67.47
TraesCS2D01G477200.1	Wheat	mitochondrion, nucleus	61.74	61.65
EES13161	Sorghum	nucleus	49.25	46.07
TraesCS2D01G378500.3	Wheat	nucleus	42.06	45.72
CDX92067	Canola	nucleus	27.82	43.43
KRG97025	Soybean	nucleus	16.42	42.61
VIT_05s0049g01800.t01	Wine grape	nucleus	32.02	42.14
Zm00001d002938_P001	Maize	nucleus	40.57	42.05
AT3G04380.1	Thale cress	nucleus	27.82	41.67
GSMUA_Achr1P20340_001	Banana	nucleus	39.48	40.99
PGSC0003DMT400051920	Potato	nucleus	27.14	39.29
KRH34133	Soybean	nucleus	36.09	38.78
CDY49341	Canola	nucleus	28.22	37.34
KRG92731	Soybean	nucleus	35.96	37.17
KRH68776	Soybean	nucleus	34.06	37.08
TraesCS6D01G208400.1	Wheat	nucleus	33.11	35.83
Bra036004.1-P	Field mustard	nucleus	30.26	35.68
TraesCS2D01G478100.1	Wheat	nucleus	28.77	35.45
CDY14903	Canola	nucleus	30.39	35.0
KRG95723	Soybean	nucleus	32.7	33.29
Solyc06g083760.2.1	Tomato	nucleus	38.13	32.64
CDX94744	Canola	nucleus	30.26	32.55
VIT_07s0005g04190.t01	Wine grape	mitochondrion, nucleus	37.45	32.55
KRH32246	Soybean	nucleus	36.23	32.52
KRH19618	Soybean	nucleus	35.96	32.24
CDY22319	Canola	nucleus	30.53	31.91
Solyc09g072890.1.1	Tomato	nucleus	35.14	31.39
AT1G04050.1	Thale cress	nucleus	31.07	31.2
AT5G43990.9	Thale cress	nucleus	31.21	31.08
PGSC0003DMT400044180	Potato	nucleus	32.29	30.87
Solyc09g090630.1.1	Tomato	nucleus	32.43	30.1
Bra033710.1-P	Field mustard	nucleus	30.26	29.73
CDX96935	Canola	nucleus	30.53	28.7
Bra001104.1-P	Field mustard	nucleus	28.09	27.38
CDY42922	Canola	plasma membrane, vacuole	27.54	24.52
TraesCS3D01G307900.1	Wheat	nucleus	10.99	24.4
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	28.36	22.19
TraesCS5D01G152000.1	Wheat	nucleus	15.88	17.01
TraesCS3D01G433900.1	Wheat	nucleus	15.33	16.38
TraesCS1D01G307700.1	Wheat	nucleus	14.65	16.02
TraesCS1D01G366800.1	Wheat	nucleus	14.52	15.83
TraesCS1D01G043400.1	Wheat	nucleus	12.48	14.38
TraesCS3D01G329100.1	Wheat	nucleus	13.84	13.73
TraesCS2D01G240000.1	Wheat	nucleus	12.35	13.48
TraesCS3D01G450600.1	Wheat	nucleus	12.35	13.4
TraesCS3D01G450700.1	Wheat	nucleus	12.62	13.3
TraesCS4D01G204500.1	Wheat	nucleus	11.94	12.96
TraesCS4D01G278500.1	Wheat	nucleus	14.11	12.7
TraesCS1D01G241500.1	Wheat	nucleus	14.11	12.7
TraesCS2D01G389100.1	Wheat	nucleus	13.16	10.1
TraesCS3D01G378200.1	Wheat	plastid	9.09	9.78
TraesCS5D01G197700.2	Wheat	plastid	14.38	9.35
TraesCS1D01G118300.1	Wheat	nucleus, plastid	14.79	8.91
TraesCS6D01G254900.2	Wheat	nucleus	16.42	7.49
TraesCS5D01G193000.2	Wheat	nucleus	10.99	7.21
TraesCS5D01G192900.1	Wheat	cytosol	1.09	4.91
CDX92068	Canola	mitochondrion	0.0	0.0
CDY42923	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	Gene3D:1.10.8.850	MapMan:12.3.3.7	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:IPR001214	InterPro:IPR003616
InterPro:IPR007728	InterPro:IPR025776	PFAM:PF00856	PFAM:PF05033	PFAM:PF10440	PFscan:PS50280
PFscan:PS50867	PFscan:PS50868	PFscan:PS51580	PANTHER:PTHR22884	PANTHER:PTHR22884:SF409	InterPro:Post-SET_dom
InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00468	SUPFAM:SSF82199	InterPro:SUVR4/1/2
EnsemblPlantsGene:TraesCS2D01G566400	EnsemblPlants:TraesCS2D01G566400.1	InterPro:WIYLD_domain	SEG:seg	:	:

Description

No Description!

Coordinates

chr2D:-:635593638..635597381

Molecular Weight (calculated)

80416.2 Da

IEP (calculated)

7.375

GRAVY (calculated)

-0.511

Length

737 amino acids

Sequence
(BLAST)

001: MVGRNEEKAR LALSAMKKLG FGRKQATPVL KRLFRLFDRQ WEPIEEDSYR ALAEAILDDQ LLQLHPQSQP QPNGGGNEVP GQEEEELDAE EPEISTPDRP
101: STTPPFRATP QSSSSFRAPA PPSGPTAFRA TGTGTGTAGG IVERGLVLAP ALNDGAQTTP SATALLTKHK HKHMMDAEFQ QPAFFFLKHP KPEPPEPQPV
201: DMDASGCRDV QPGLILRSRN LNLASSSSDL NALPPPDRNP HHISGSDKNR AIQHHSRNTD MSVEPTSSST LINGTGSQVQ EIDVASSPGG EVKLSLKCSA
301: DPSKLKMPDL EAVYKMVEDK YLCSDKLLPP DFSIPGLMAE ICQSVVQMGT QHTMTEHITQ SHTVGNGSTS KCVEGGSASS TPAPQPHLAL SRTTHDVHDI
401: SRGQENVKIP IANESGRGKC PPSFSYIPGN EVFQNGIVNI SLAHIGAQDS CADCFGDCLS APVPCACARV TGGEYAYTPG GLVKPEFIDK CVSVNRIPEV
501: HHKVFCKTCP LERSRDKASP EPCRGHLVRR FIKECWSKCG CSMRCGNRVV QRGIRCNLQV FSTGNGRGWG LRTQNALPKG AFVCEYAGEI LTCVEVHGRA
601: VENMKNNRYT HTVVLDAGWS SGGSLKDEDA LCLDGTFYGN VGRFINHRCR DANLAMVPVQ VETPDRHYYH VAFFTSRKVE ALEELTWDYG IDFDLELGPV
701: KVFECLCGSK YCRGSRRHRQ RLRNGNGNGN GRSRIEG

Best Arabidopsis Sequence Match ( AT3G04380.1 )
(BLAST)

001: MISLSGLTSS VESDLDMQQA MLTNKDEKVL KALERTRQLD IPDEKTMPVL MKLLEEAGGN WSYIKLDNYT ALVDAIYSVE DENKQSEGSS NGNRGKNLKV
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK

Arabidopsis Description

SUVR4Histone-lysine N-methyltransferase SUVR4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W595]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.